RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 HINT1P49773 126 aaPredicted RBP13.27□□□□□ -0.29
PKP3-206ENST00000528036 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.29
PKP3-206ENST00000528036 SSBP3-AS1Q7Z2R9 100 aa13.27□□□□□ -0.29
PKP3-206ENST00000528036 Q8NBF4 154 aa13.27□□□□□ -0.29
PKP3-206ENST00000528036 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
PKP3-206ENST00000528036 C5orf52A6NGY3 159 aa13.26□□□□□ -0.29
PKP3-206ENST00000528036 TIMM17BO60830 172 aa13.26□□□□□ -0.29
PKP3-206ENST00000528036 LINC01545Q5VT33 79 aa13.26□□□□□ -0.29
PKP3-206ENST00000528036 ADAMTSL4-AS1Q5T5F5 129 aa13.24□□□□□ -0.29
PKP3-206ENST00000528036 ZNF73O43830 326 aaPredicted RBP13.23□□□□□ -0.29
PKP3-206ENST00000528036 RPS29P62273 56 aaKnown RBP13.23□□□□□ -0.29
PKP3-206ENST00000528036 Q9BRP9 147 aa13.23□□□□□ -0.29
PKP3-206ENST00000528036 SPANXCQ9NY87 97 aa13.23□□□□□ -0.29
PKP3-206ENST00000528036 SOSTDC1Q6X4U4 206 aa13.22□□□□□ -0.29
PKP3-206ENST00000528036 ERC2-IT1O76042 136 aa13.2□□□□□ -0.3
PKP3-206ENST00000528036 NPC2P61916 151 aa13.19□□□□□ -0.3
PKP3-206ENST00000528036 LINC00308Q8TCZ7 52 aa13.19□□□□□ -0.3
PKP3-206ENST00000528036 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
PKP3-206ENST00000528036 IGLV9-49A0A0B4J1Y8 123 aa13.17□□□□□ -0.3
PKP3-206ENST00000528036 ZNF815PA8K554 130 aa13.17□□□□□ -0.3
PKP3-206ENST00000528036 AKR1D1P51857 326 aa13.17□□□□□ -0.3
PKP3-206ENST00000528036 MOBPQ13875 183 aa13.17□□□□□ -0.3
PKP3-206ENST00000528036 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
PKP3-206ENST00000528036 COPS9Q8WXC6 57 aa13.16□□□□□ -0.3
PKP3-206ENST00000528036 LITAFQ99732 161 aa13.16□□□□□ -0.3
PKP3-206ENST00000528036 C20orf202A1L168 122 aa13.15□□□□□ -0.3
PKP3-206ENST00000528036 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
PKP3-206ENST00000528036 OR13C6PQ8NH95 151 aa13.15□□□□□ -0.3
PKP3-206ENST00000528036 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
PKP3-206ENST00000528036 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
PKP3-206ENST00000528036 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
PKP3-206ENST00000528036 MUC2Q02817 5179 aa13.13□□□□□ -0.31
PKP3-206ENST00000528036 DHRS4-AS1Q9P1J3 65 aa13.13□□□□□ -0.31
PKP3-206ENST00000528036 SLC25A20O43772 301 aa13.11□□□□□ -0.31
PKP3-206ENST00000528036 KRTDAPP60985 99 aa13.1□□□□□ -0.31
PKP3-206ENST00000528036 C9orf153Q5TBE3 101 aa13.09□□□□□ -0.31
PKP3-206ENST00000528036 SCGB1D4Q6XE38 83 aa13.08□□□□□ -0.32
PKP3-206ENST00000528036 Q6ZVH6 145 aa13.07□□□□□ -0.32
PKP3-206ENST00000528036 IFITM1P13164 125 aa13.06□□□□□ -0.32
PKP3-206ENST00000528036 SPRR1BP22528 89 aa13.06□□□□□ -0.32
PKP3-206ENST00000528036 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
PKP3-206ENST00000528036 Q8N377 158 aa13.06□□□□□ -0.32
PKP3-206ENST00000528036 TRBV7-6A0A0J9YX20 115 aa13.03□□□□□ -0.32
PKP3-206ENST00000528036 COX7BP24311 80 aa13.03□□□□□ -0.32
PKP3-206ENST00000528036 ST20-AS1Q8NBB2 130 aa13.03□□□□□ -0.32
PKP3-206ENST00000528036 LAMTOR3Q9UHA4 124 aa13.03□□□□□ -0.32
PKP3-206ENST00000528036 ELOF1P60002 83 aaKnown RBP13.02□□□□□ -0.33
PKP3-206ENST00000528036 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
PKP3-206ENST00000528036 TTTY13Q9BZ97 58 aa13.02□□□□□ -0.33
PKP3-206ENST00000528036 C6orf99Q4VX62 202 aa13□□□□□ -0.33
PKP3-206ENST00000528036 SEC61BP60468 96 aaKnown RBP12.97□□□□□ -0.33
PKP3-206ENST00000528036 ASB16-AS1Q495Z4 193 aa12.97□□□□□ -0.33
PKP3-206ENST00000528036 LIMD2Q9BT23 127 aa12.97□□□□□ -0.33
PKP3-206ENST00000528036 A0A1B0GWB2 263 aa12.96□□□□□ -0.33
PKP3-206ENST00000528036 ANKRD39Q53RE8 183 aa12.96□□□□□ -0.33
PKP3-206ENST00000528036 TAL2Q16559 108 aa12.95□□□□□ -0.34
PKP3-206ENST00000528036 A4D1N5 150 aa12.94□□□□□ -0.34
PKP3-206ENST00000528036 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
PKP3-206ENST00000528036 MUC17Q685J3 4493 aa12.93□□□□□ -0.34
PKP3-206ENST00000528036 A6NDN8 102 aa12.92□□□□□ -0.34
PKP3-206ENST00000528036 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
PKP3-206ENST00000528036 CD164Q04900 197 aa12.91□□□□□ -0.34
PKP3-206ENST00000528036 MUSTN1Q8IVN3 82 aa12.9□□□□□ -0.34
PKP3-206ENST00000528036 ATOH7Q8N100 152 aa12.9□□□□□ -0.34
PKP3-206ENST00000528036 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.34
PKP3-206ENST00000528036 PRO1933Q9H354 126 aa12.89□□□□□ -0.35
PKP3-206ENST00000528036 LCE2AQ5TA79 106 aaPredicted RBP12.88□□□□□ -0.35
PKP3-206ENST00000528036 PCP2Q8IVA1 136 aa12.88□□□□□ -0.35
PKP3-206ENST00000528036 S100A2P29034 98 aa12.87□□□□□ -0.35
PKP3-206ENST00000528036 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
PKP3-206ENST00000528036 DEFB105AQ8NG35 78 aa12.86□□□□□ -0.35
PKP3-206ENST00000528036 XP32Q5T750 250 aa12.85□□□□□ -0.35
PKP3-206ENST00000528036 IGLV5-48A0A075B6I7 105 aa12.83□□□□□ -0.36
PKP3-206ENST00000528036 H7C2G1 150 aa12.82□□□□□ -0.36
PKP3-206ENST00000528036 VAMP3Q15836 100 aa12.82□□□□□ -0.36
PKP3-206ENST00000528036 Q1RN00 199 aa12.82□□□□□ -0.36
PKP3-206ENST00000528036 HRCT1Q6UXD1 115 aa12.81□□□□□ -0.36
PKP3-206ENST00000528036 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
PKP3-206ENST00000528036 FAT4Q6V0I7 4981 aa12.8□□□□□ -0.36
PKP3-206ENST00000528036 S100A1P23297 94 aa12.8□□□□□ -0.36
PKP3-206ENST00000528036 Q5XG85 94 aa12.8□□□□□ -0.36
PKP3-206ENST00000528036 HIST1H2BLQ99880 126 aa12.8□□□□□ -0.36
PKP3-206ENST00000528036 S100A6P06703 90 aa12.78□□□□□ -0.36
PKP3-206ENST00000528036 SMIM11BQ8TCY0 68 aa12.78□□□□□ -0.36
PKP3-206ENST00000528036 SMIM29Q86T20 159 aa12.77□□□□□ -0.37
PKP3-206ENST00000528036 LINC01547P58512 204 aaPredicted RBP12.76□□□□□ -0.37
PKP3-206ENST00000528036 F8WEM9 126 aa12.7□□□□□ -0.38
PKP3-206ENST00000528036 LINC00575Q6W349 94 aa12.68□□□□□ -0.38
PKP3-206ENST00000528036 TCL1BO95988 128 aa12.67□□□□□ -0.38
PKP3-206ENST00000528036 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
PKP3-206ENST00000528036 KRTAP4-1Q9BYQ7 146 aa12.64□□□□□ -0.39
PKP3-206ENST00000528036 SCGB1D1O95968 90 aa12.63□□□□□ -0.39
PKP3-206ENST00000528036 BVES-AS1Q5T3Y7 98 aa12.63□□□□□ -0.39
PKP3-206ENST00000528036 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
PKP3-206ENST00000528036 Q6JHZ5 121 aa12.63□□□□□ -0.39
PKP3-206ENST00000528036 KRTAP9-2Q9BYQ4 174 aa12.63□□□□□ -0.39
PKP3-206ENST00000528036 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
PKP3-206ENST00000528036 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
PKP3-206ENST00000528036 PPDPFLQ8WWR9 84 aa12.61□□□□□ -0.39
PKP3-206ENST00000528036 Q6ZQY7 126 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms