RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
CAPN1-207ENST00000527189 GAGE10A6NGK3 116 aa7.95□□□□□ -1.14
CAPN1-207ENST00000527189 CRYGAP11844 174 aa7.95□□□□□ -1.14
CAPN1-207ENST00000527189 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
CAPN1-207ENST00000527189 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
CAPN1-207ENST00000527189 NHP2Q9NX24 153 aaKnown RBP7.95□□□□□ -1.14
CAPN1-207ENST00000527189 A0A0J9YXY3 114 aa7.94□□□□□ -1.14
CAPN1-207ENST00000527189 IFITM1P13164 125 aa7.94□□□□□ -1.14
CAPN1-207ENST00000527189 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
CAPN1-207ENST00000527189 VPREB1P12018 145 aa7.93□□□□□ -1.14
CAPN1-207ENST00000527189 UBE2AP49459 152 aa7.93□□□□□ -1.14
CAPN1-207ENST00000527189 VAMP3Q15836 100 aa7.93□□□□□ -1.14
CAPN1-207ENST00000527189 RAB37Q96AX2 223 aa7.93□□□□□ -1.14
CAPN1-207ENST00000527189 GTF2H5Q6ZYL4 71 aa7.92□□□□□ -1.14
CAPN1-207ENST00000527189 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CAPN1-207ENST00000527189 SPANXDQ9BXN6 97 aa7.92□□□□□ -1.14
CAPN1-207ENST00000527189 SPANXCQ9NY87 97 aa7.92□□□□□ -1.14
CAPN1-207ENST00000527189 IGKV2-28A0A075B6P5 120 aa7.91□□□□□ -1.14
CAPN1-207ENST00000527189 A0A087X002 238 aa7.91□□□□□ -1.14
CAPN1-207ENST00000527189 IGKV2D-28P01615 120 aa7.91□□□□□ -1.14
CAPN1-207ENST00000527189 FXYD2P54710 66 aa7.91□□□□□ -1.14
CAPN1-207ENST00000527189 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
CAPN1-207ENST00000527189 C9orf118A6NHY6 69 aa7.9□□□□□ -1.14
CAPN1-207ENST00000527189 FABP2P12104 132 aa7.9□□□□□ -1.14
CAPN1-207ENST00000527189 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.14
CAPN1-207ENST00000527189 TAX1BP3O14907 124 aa7.89□□□□□ -1.15
CAPN1-207ENST00000527189 PRR4Q16378 134 aa7.89□□□□□ -1.15
CAPN1-207ENST00000527189 TMEM126AQ9H061 195 aa7.89□□□□□ -1.15
CAPN1-207ENST00000527189 LINC00158P58513 81 aa7.88□□□□□ -1.15
CAPN1-207ENST00000527189 H3BUT2 72 aa7.87□□□□□ -1.15
CAPN1-207ENST00000527189 Q1RN00 199 aa7.87□□□□□ -1.15
CAPN1-207ENST00000527189 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
CAPN1-207ENST00000527189 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
CAPN1-207ENST00000527189 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
CAPN1-207ENST00000527189 M0R378 163 aa7.86□□□□□ -1.15
CAPN1-207ENST00000527189 TSPAN13O95857 204 aa7.86□□□□□ -1.15
CAPN1-207ENST00000527189 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
CAPN1-207ENST00000527189 PRLHP81277 87 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 Q8NDZ9 215 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
CAPN1-207ENST00000527189 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
CAPN1-207ENST00000527189 A4D1N5 150 aa7.84□□□□□ -1.15
CAPN1-207ENST00000527189 K7ERJ3 54 aa7.84□□□□□ -1.15
CAPN1-207ENST00000527189 COX6CP09669 75 aa7.83□□□□□ -1.16
CAPN1-207ENST00000527189 PSMB2P49721 201 aa7.83□□□□□ -1.16
CAPN1-207ENST00000527189 SPCS1Q9Y6A9 102 aa7.83□□□□□ -1.16
CAPN1-207ENST00000527189 UBE2V1Q13404 147 aa7.82□□□□□ -1.16
CAPN1-207ENST00000527189 A0A0U1RRA0 63 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 NPC2P61916 151 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 LITAFQ99732 161 aa7.81□□□□□ -1.16
CAPN1-207ENST00000527189 LOC107984156A0A0G2JMH3 177 aa7.8□□□□□ -1.16
CAPN1-207ENST00000527189 K7EP34 96 aa7.8□□□□□ -1.16
CAPN1-207ENST00000527189 ARL17AQ8IVW1 177 aa7.8□□□□□ -1.16
CAPN1-207ENST00000527189 MIR7-3HGQ8N6C7 128 aa7.8□□□□□ -1.16
CAPN1-207ENST00000527189 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 PRYO14603 147 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 CFC1BP0CG36 223 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 CFC1P0CG37 223 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-207ENST00000527189 HIGD2AQ9BW72 106 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 KCNQ1DNQ9H478 68 aa7.79□□□□□ -1.16
CAPN1-207ENST00000527189 TRBV20-1A0A075B6N2 111 aa7.78□□□□□ -1.16
CAPN1-207ENST00000527189 SPRR1AP35321 89 aa7.78□□□□□ -1.16
CAPN1-207ENST00000527189 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
CAPN1-207ENST00000527189 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
CAPN1-207ENST00000527189 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
CAPN1-207ENST00000527189 H7C2G1 150 aa7.77□□□□□ -1.17
CAPN1-207ENST00000527189 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
CAPN1-207ENST00000527189 DAND5Q8N907 189 aa7.77□□□□□ -1.17
CAPN1-207ENST00000527189 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
CAPN1-207ENST00000527189 FSIP2Q5CZC0 6907 aa7.76□□□□□ -1.17
CAPN1-207ENST00000527189 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
CAPN1-207ENST00000527189 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
CAPN1-207ENST00000527189 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-207ENST00000527189 NCR3O14931 201 aa7.74□□□□□ -1.17
CAPN1-207ENST00000527189 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
CAPN1-207ENST00000527189 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
CAPN1-207ENST00000527189 ATXN8Q156A1 80 aa7.73□□□□□ -1.17
CAPN1-207ENST00000527189 C3orf22Q8N5N4 141 aa7.73□□□□□ -1.17
CAPN1-207ENST00000527189 CBY1Q9Y3M2 126 aa7.73□□□□□ -1.17
CAPN1-207ENST00000527189 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
CAPN1-207ENST00000527189 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
CAPN1-207ENST00000527189 SNCGO76070 127 aa7.71□□□□□ -1.18
CAPN1-207ENST00000527189 NDUFC2O95298 119 aa7.71□□□□□ -1.18
CAPN1-207ENST00000527189 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
CAPN1-207ENST00000527189 OR13C6PQ8NH95 151 aa7.71□□□□□ -1.18
CAPN1-207ENST00000527189 RETNLBQ9BQ08 111 aa7.71□□□□□ -1.18
CAPN1-207ENST00000527189 A0A0U1RQV1 116 aa7.7□□□□□ -1.18
CAPN1-207ENST00000527189 F8W1H4 67 aa7.7□□□□□ -1.18
CAPN1-207ENST00000527189 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
CAPN1-207ENST00000527189 B5MCH6 92 aa7.69□□□□□ -1.18
CAPN1-207ENST00000527189 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
CAPN1-207ENST00000527189 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
CAPN1-207ENST00000527189 S100A7L2Q5SY68 101 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms