RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.59
USH1C-205ENST00000527020 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
USH1C-205ENST00000527020 GHRHP01286 108 aa11.38□□□□□ -0.59
USH1C-205ENST00000527020 C9orf153Q5TBE3 101 aa11.38□□□□□ -0.59
USH1C-205ENST00000527020 FAM168BA1KXE4 195 aa11.38□□□□□ -0.59
USH1C-205ENST00000527020 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
USH1C-205ENST00000527020 Q6ZVQ6 151 aa11.37□□□□□ -0.59
USH1C-205ENST00000527020 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
USH1C-205ENST00000527020 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
USH1C-205ENST00000527020 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
USH1C-205ENST00000527020 RMI2Q96E14 147 aa11.34□□□□□ -0.59
USH1C-205ENST00000527020 LYSTQ99698 3801 aa11.34□□□□□ -0.59
USH1C-205ENST00000527020 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
USH1C-205ENST00000527020 DNAH10Q8IVF4 4471 aa11.33□□□□□ -0.6
USH1C-205ENST00000527020 KRTAP4-16G5E9R7 235 aaPredicted RBP11.33□□□□□ -0.6
USH1C-205ENST00000527020 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
USH1C-205ENST00000527020 RPL37AP8A6NKH3 93 aa11.33□□□□□ -0.6
USH1C-205ENST00000527020 CRYGAP11844 174 aa11.32□□□□□ -0.6
USH1C-205ENST00000527020 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
USH1C-205ENST00000527020 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
USH1C-205ENST00000527020 SPRR1AP35321 89 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 HAMPP81172 84 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 Q6ZRX8 168 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 Q8N377 158 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 Q9BRP9 147 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 CYSTM1Q9H1C7 97 aa11.3□□□□□ -0.6
USH1C-205ENST00000527020 PRYO14603 147 aa11.29□□□□□ -0.6
USH1C-205ENST00000527020 CXCL6P80162 114 aa11.27□□□□□ -0.61
USH1C-205ENST00000527020 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
USH1C-205ENST00000527020 LOC107984640A0A0U1RRK4 108 aa11.26□□□□□ -0.61
USH1C-205ENST00000527020 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
USH1C-205ENST00000527020 DYNC2H1Q8NCM8 4307 aaKnown RBP11.26□□□□□ -0.61
USH1C-205ENST00000527020 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
USH1C-205ENST00000527020 MRPL55Q7Z7F7 128 aaKnown RBP11.24□□□□□ -0.61
USH1C-205ENST00000527020 IGLV5-48A0A075B6I7 105 aa11.23□□□□□ -0.61
USH1C-205ENST00000527020 ETDCA0A1B0GVM5 59 aa11.23□□□□□ -0.61
USH1C-205ENST00000527020 SCXQ7RTU7 201 aa11.23□□□□□ -0.61
USH1C-205ENST00000527020 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
USH1C-205ENST00000527020 ERC2-IT1O76042 136 aa11.2□□□□□ -0.62
USH1C-205ENST00000527020 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
USH1C-205ENST00000527020 SMIM20Q8N5G0 67 aa11.19□□□□□ -0.62
USH1C-205ENST00000527020 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
USH1C-205ENST00000527020 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
USH1C-205ENST00000527020 TNP2Q05952 138 aa11.18□□□□□ -0.62
USH1C-205ENST00000527020 A0A096LNI7 61 aa11.18□□□□□ -0.62
USH1C-205ENST00000527020 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
USH1C-205ENST00000527020 BCE1O60756 84 aa11.17□□□□□ -0.62
USH1C-205ENST00000527020 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
USH1C-205ENST00000527020 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
USH1C-205ENST00000527020 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
USH1C-205ENST00000527020 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
USH1C-205ENST00000527020 A0A1W2PNM2 257 aa11.14□□□□□ -0.63
USH1C-205ENST00000527020 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
USH1C-205ENST00000527020 PLECQ15149 4684 aaKnown RBP11.13□□□□□ -0.63
USH1C-205ENST00000527020 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
USH1C-205ENST00000527020 MDFIQ99750 246 aa11.13□□□□□ -0.63
USH1C-205ENST00000527020 IGKV2-24A0A0C4DH68 120 aa11.13□□□□□ -0.63
USH1C-205ENST00000527020 PSCAO43653 123 aa11.13□□□□□ -0.63
USH1C-205ENST00000527020 UBE2BP63146 152 aa11.13□□□□□ -0.63
USH1C-205ENST00000527020 TRAV7A0A075B6U4 112 aa11.12□□□□□ -0.63
USH1C-205ENST00000527020 NREPQ16612 68 aa11.12□□□□□ -0.63
USH1C-205ENST00000527020 Q8N9L7 120 aa11.11□□□□□ -0.63
USH1C-205ENST00000527020 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
USH1C-205ENST00000527020 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
USH1C-205ENST00000527020 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
USH1C-205ENST00000527020 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
USH1C-205ENST00000527020 SMIM29Q86T20 159 aa11.09□□□□□ -0.63
USH1C-205ENST00000527020 TMEM258P61165 79 aa11.09□□□□□ -0.63
USH1C-205ENST00000527020 C20orf197Q8N268 126 aa11.09□□□□□ -0.63
USH1C-205ENST00000527020 FUSP35637 526 aaKnown RBP eCLIP11.07□□□□□ -0.64
USH1C-205ENST00000527020 Q8NBF4 154 aa11.07□□□□□ -0.64
USH1C-205ENST00000527020 A0A1B0GW54 56 aa11.06□□□□□ -0.64
USH1C-205ENST00000527020 BPY2O14599 106 aa11.06□□□□□ -0.64
USH1C-205ENST00000527020 PRLHP81277 87 aa11.06□□□□□ -0.64
USH1C-205ENST00000527020 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
USH1C-205ENST00000527020 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
USH1C-205ENST00000527020 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
USH1C-205ENST00000527020 SPRR4Q96PI1 79 aa11.05□□□□□ -0.64
USH1C-205ENST00000527020 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
USH1C-205ENST00000527020 LRCOL1A6NCL2 159 aa11.03□□□□□ -0.64
USH1C-205ENST00000527020 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
USH1C-205ENST00000527020 LINC00476Q8WZB0 136 aa11.01□□□□□ -0.65
USH1C-205ENST00000527020 NBDYA0A0U1RRE5 68 aa11□□□□□ -0.65
USH1C-205ENST00000527020 DPH3Q96FX2 82 aa11□□□□□ -0.65
USH1C-205ENST00000527020 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
USH1C-205ENST00000527020 C9orf163Q8N9P6 203 aa11□□□□□ -0.65
USH1C-205ENST00000527020 A0A0G2JQZ4 141 aa10.99□□□□□ -0.65
USH1C-205ENST00000527020 J3KT08 172 aa10.99□□□□□ -0.65
USH1C-205ENST00000527020 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
USH1C-205ENST00000527020 Q6ZRN7 208 aaPredicted RBP10.99□□□□□ -0.65
USH1C-205ENST00000527020 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
USH1C-205ENST00000527020 SRRM2Q9UQ35 2752 aaKnown RBP10.98□□□□□ -0.65
USH1C-205ENST00000527020 RPS28P62857 69 aaKnown RBP10.98□□□□□ -0.65
USH1C-205ENST00000527020 HIGD2AQ9BW72 106 aa10.98□□□□□ -0.65
USH1C-205ENST00000527020 H7BZZ5 65 aa10.97□□□□□ -0.65
USH1C-205ENST00000527020 IGFL1Q6UW32 110 aa10.97□□□□□ -0.65
USH1C-205ENST00000527020 SNURFQ9Y675 71 aa10.97□□□□□ -0.65
USH1C-205ENST00000527020 NUPR2A6NF83 97 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms