RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SOSTDC1Q6X4U4 206 aa5.39□□□□□ -1.55
SF3B2-204ENST00000525207 Q9BRP9 147 aa5.39□□□□□ -1.55
SF3B2-204ENST00000525207 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
SF3B2-204ENST00000525207 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
SF3B2-204ENST00000525207 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
SF3B2-204ENST00000525207 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
SF3B2-204ENST00000525207 ERC2-IT1O76042 136 aa5.38□□□□□ -1.55
SF3B2-204ENST00000525207 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
SF3B2-204ENST00000525207 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
SF3B2-204ENST00000525207 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 MOBPQ13875 183 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
SF3B2-204ENST00000525207 S100A7L2Q5SY68 101 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 GAGE2AQ6NT46 116 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BHQ93079 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BNQ99877 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 HIST1H2BMQ99879 126 aa5.37□□□□□ -1.55
SF3B2-204ENST00000525207 SPINK1P00995 79 aa5.36□□□□□ -1.55
SF3B2-204ENST00000525207 NPC2P61916 151 aa5.36□□□□□ -1.55
SF3B2-204ENST00000525207 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
SF3B2-204ENST00000525207 LINC01545Q5VT33 79 aa5.36□□□□□ -1.55
SF3B2-204ENST00000525207 LITAFQ99732 161 aa5.36□□□□□ -1.55
SF3B2-204ENST00000525207 IGLV9-49A0A0B4J1Y8 123 aa5.35□□□□□ -1.55
SF3B2-204ENST00000525207 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
SF3B2-204ENST00000525207 ZNF73O43830 326 aaPredicted RBP5.35□□□□□ -1.55
SF3B2-204ENST00000525207 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
SF3B2-204ENST00000525207 JOSD1Q15040 202 aaPredicted RBP5.34□□□□□ -1.55
SF3B2-204ENST00000525207 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
SF3B2-204ENST00000525207 TIMM17BO60830 172 aa5.33□□□□□ -1.56
SF3B2-204ENST00000525207 S100A1P23297 94 aa5.33□□□□□ -1.56
SF3B2-204ENST00000525207 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SF3B2-204ENST00000525207 PET117Q6UWS5 81 aa5.33□□□□□ -1.56
SF3B2-204ENST00000525207 LINC00308Q8TCZ7 52 aa5.33□□□□□ -1.56
SF3B2-204ENST00000525207 ZNF815PA8K554 130 aa5.32□□□□□ -1.56
SF3B2-204ENST00000525207 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
SF3B2-204ENST00000525207 Q8N377 158 aa5.32□□□□□ -1.56
SF3B2-204ENST00000525207 CBY1Q9Y3M2 126 aa5.32□□□□□ -1.56
SF3B2-204ENST00000525207 C3orf79P0CE67 100 aa5.31□□□□□ -1.56
SF3B2-204ENST00000525207 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
SF3B2-204ENST00000525207 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
SF3B2-204ENST00000525207 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
SF3B2-204ENST00000525207 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
SF3B2-204ENST00000525207 C5orf52A6NGY3 159 aa5.3□□□□□ -1.56
SF3B2-204ENST00000525207 COA6Q5JTJ3 125 aaKnown RBP5.3□□□□□ -1.56
SF3B2-204ENST00000525207 SPANXDQ9BXN6 97 aa5.3□□□□□ -1.56
SF3B2-204ENST00000525207 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
SF3B2-204ENST00000525207 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
SF3B2-204ENST00000525207 OR13C6PQ8NH95 151 aa5.29□□□□□ -1.56
SF3B2-204ENST00000525207 SLC25A20O43772 301 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 SPRR1BP22528 89 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 ELOF1P60002 83 aaKnown RBP5.28□□□□□ -1.56
SF3B2-204ENST00000525207 KRTDAPP60985 99 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 DHRS4-AS1Q9P1J3 65 aa5.28□□□□□ -1.56
SF3B2-204ENST00000525207 C20orf202A1L168 122 aa5.26□□□□□ -1.57
SF3B2-204ENST00000525207 C6orf99Q4VX62 202 aa5.26□□□□□ -1.57
SF3B2-204ENST00000525207 SLC25A34Q6PIV7 304 aa5.26□□□□□ -1.57
SF3B2-204ENST00000525207 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
SF3B2-204ENST00000525207 LINC00518Q8N0U6 118 aa5.26□□□□□ -1.57
SF3B2-204ENST00000525207 COX7BP24311 80 aa5.25□□□□□ -1.57
SF3B2-204ENST00000525207 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
SF3B2-204ENST00000525207 ATOH7Q8N100 152 aa5.24□□□□□ -1.57
SF3B2-204ENST00000525207 IFITM1P13164 125 aa5.23□□□□□ -1.57
SF3B2-204ENST00000525207 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
SF3B2-204ENST00000525207 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
SF3B2-204ENST00000525207 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
SF3B2-204ENST00000525207 LAMTOR3Q9UHA4 124 aa5.23□□□□□ -1.57
SF3B2-204ENST00000525207 TRBV7-6A0A0J9YX20 115 aa5.22□□□□□ -1.57
SF3B2-204ENST00000525207 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
SF3B2-204ENST00000525207 Q6ZVH6 145 aa5.22□□□□□ -1.57
SF3B2-204ENST00000525207 PCP2Q8IVA1 136 aa5.22□□□□□ -1.57
SF3B2-204ENST00000525207 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
SF3B2-204ENST00000525207 AKR1D1P51857 326 aa5.21□□□□□ -1.58
SF3B2-204ENST00000525207 Q1RN00 199 aa5.21□□□□□ -1.58
SF3B2-204ENST00000525207 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
SF3B2-204ENST00000525207 TEX49A0A1B0GTD5 131 aa5.2□□□□□ -1.58
SF3B2-204ENST00000525207 TAL2Q16559 108 aa5.2□□□□□ -1.58
SF3B2-204ENST00000525207 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
SF3B2-204ENST00000525207 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
SF3B2-204ENST00000525207 A6NDN8 102 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
SF3B2-204ENST00000525207 CD164Q04900 197 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 SMIM29Q86T20 159 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 HIST3H2BBQ8N257 126 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
SF3B2-204ENST00000525207 SNRPEP62304 92 aaKnown RBP5.18□□□□□ -1.58
SF3B2-204ENST00000525207 PRO1933Q9H354 126 aa5.18□□□□□ -1.58
SF3B2-204ENST00000525207 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
SF3B2-204ENST00000525207 A4D1N5 150 aa5.17□□□□□ -1.58
SF3B2-204ENST00000525207 S100A6P06703 90 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms