RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.05
PRKDC-204ENST00000521331 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
PRKDC-204ENST00000521331 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
PRKDC-204ENST00000521331 HIGD2AQ9BW72 106 aa8.51□□□□□ -1.05
PRKDC-204ENST00000521331 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-204ENST00000521331 HBDP02042 147 aa8.49□□□□□ -1.05
PRKDC-204ENST00000521331 ZNF706Q9Y5V0 76 aaPredicted RBP8.49□□□□□ -1.05
PRKDC-204ENST00000521331 HSD52Q0P140 79 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 Q6ZVH6 145 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 Q8NDZ9 215 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
PRKDC-204ENST00000521331 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 HIGD1BQ9P298 99 aa8.48□□□□□ -1.05
PRKDC-204ENST00000521331 VAMP3Q15836 100 aa8.47□□□□□ -1.05
PRKDC-204ENST00000521331 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.06
PRKDC-204ENST00000521331 A6NDN8 102 aa8.45□□□□□ -1.06
PRKDC-204ENST00000521331 C9orf118A6NHY6 69 aa8.45□□□□□ -1.06
PRKDC-204ENST00000521331 PCP4P48539 62 aa8.45□□□□□ -1.06
PRKDC-204ENST00000521331 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-204ENST00000521331 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
PRKDC-204ENST00000521331 OCIAD2Q56VL3 154 aa8.44□□□□□ -1.06
PRKDC-204ENST00000521331 LINC00158P58513 81 aa8.43□□□□□ -1.06
PRKDC-204ENST00000521331 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
PRKDC-204ENST00000521331 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
PRKDC-204ENST00000521331 Q8NBF4 154 aa8.43□□□□□ -1.06
PRKDC-204ENST00000521331 C11orf86A6NJI1 115 aa8.42□□□□□ -1.06
PRKDC-204ENST00000521331 SPINK1P00995 79 aa8.42□□□□□ -1.06
PRKDC-204ENST00000521331 GTF2H5Q6ZYL4 71 aa8.42□□□□□ -1.06
PRKDC-204ENST00000521331 K7EP34 96 aa8.41□□□□□ -1.06
PRKDC-204ENST00000521331 PRYO14603 147 aa8.41□□□□□ -1.06
PRKDC-204ENST00000521331 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-204ENST00000521331 DAND5Q8N907 189 aa8.41□□□□□ -1.06
PRKDC-204ENST00000521331 K7ERU9 68 aa8.4□□□□□ -1.06
PRKDC-204ENST00000521331 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
PRKDC-204ENST00000521331 TAL2Q16559 108 aa8.39□□□□□ -1.07
PRKDC-204ENST00000521331 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
PRKDC-204ENST00000521331 SPRR1AP35321 89 aa8.38□□□□□ -1.07
PRKDC-204ENST00000521331 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
PRKDC-204ENST00000521331 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
PRKDC-204ENST00000521331 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
PRKDC-204ENST00000521331 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
PRKDC-204ENST00000521331 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
PRKDC-204ENST00000521331 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
PRKDC-204ENST00000521331 A0A1W2PPM0 123 aa8.36□□□□□ -1.07
PRKDC-204ENST00000521331 H0Y8G0 127 aa8.36□□□□□ -1.07
PRKDC-204ENST00000521331 DPM2O94777 84 aa8.36□□□□□ -1.07
PRKDC-204ENST00000521331 IGKCP01834 107 aa8.36□□□□□ -1.07
PRKDC-204ENST00000521331 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
PRKDC-204ENST00000521331 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
PRKDC-204ENST00000521331 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
PRKDC-204ENST00000521331 NCR3O14931 201 aa8.35□□□□□ -1.07
PRKDC-204ENST00000521331 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
PRKDC-204ENST00000521331 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
PRKDC-204ENST00000521331 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
PRKDC-204ENST00000521331 A0A1B0GWB2 263 aa8.34□□□□□ -1.07
PRKDC-204ENST00000521331 MEIG1Q5JSS6 88 aa8.34□□□□□ -1.07
PRKDC-204ENST00000521331 PLNP26678 52 aa8.33□□□□□ -1.08
PRKDC-204ENST00000521331 HERV-K104P63124 156 aa8.33□□□□□ -1.08
PRKDC-204ENST00000521331 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
PRKDC-204ENST00000521331 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
PRKDC-204ENST00000521331 KRTAP4-1Q9BYQ7 146 aa8.33□□□□□ -1.08
PRKDC-204ENST00000521331 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
PRKDC-204ENST00000521331 E9PLD3 99 aa8.32□□□□□ -1.08
PRKDC-204ENST00000521331 H3BUT2 72 aa8.32□□□□□ -1.08
PRKDC-204ENST00000521331 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
PRKDC-204ENST00000521331 Q8N377 158 aa8.32□□□□□ -1.08
PRKDC-204ENST00000521331 FABP2P12104 132 aa8.31□□□□□ -1.08
PRKDC-204ENST00000521331 NMUP48645 174 aa8.31□□□□□ -1.08
PRKDC-204ENST00000521331 MOBPQ13875 183 aa8.31□□□□□ -1.08
PRKDC-204ENST00000521331 CEND1Q8N111 149 aa8.31□□□□□ -1.08
PRKDC-204ENST00000521331 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
PRKDC-204ENST00000521331 B5MCH6 92 aa8.3□□□□□ -1.08
PRKDC-204ENST00000521331 SLC25A20O43772 301 aa8.3□□□□□ -1.08
PRKDC-204ENST00000521331 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
PRKDC-204ENST00000521331 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
PRKDC-204ENST00000521331 FXYD2P54710 66 aa8.29□□□□□ -1.08
PRKDC-204ENST00000521331 GHRHP01286 108 aa8.28□□□□□ -1.08
PRKDC-204ENST00000521331 C21orf62-AS1Q17RA5 79 aa8.28□□□□□ -1.08
PRKDC-204ENST00000521331 XP32Q5T750 250 aa8.28□□□□□ -1.08
PRKDC-204ENST00000521331 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
PRKDC-204ENST00000521331 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
PRKDC-204ENST00000521331 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
PRKDC-204ENST00000521331 F8W1H4 67 aa8.26□□□□□ -1.09
PRKDC-204ENST00000521331 LOC107984156A0A0G2JMH3 177 aa8.25□□□□□ -1.09
PRKDC-204ENST00000521331 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
PRKDC-204ENST00000521331 Q6ZRX8 168 aa8.25□□□□□ -1.09
PRKDC-204ENST00000521331 ARL17AQ8IVW1 177 aa8.25□□□□□ -1.09
PRKDC-204ENST00000521331 Q9BRP9 147 aa8.25□□□□□ -1.09
PRKDC-204ENST00000521331 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
PRKDC-204ENST00000521331 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
PRKDC-204ENST00000521331 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
PRKDC-204ENST00000521331 TTTY13Q9BZ97 58 aa8.22□□□□□ -1.09
PRKDC-204ENST00000521331 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-204ENST00000521331 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
PRKDC-204ENST00000521331 IGLV6-57P01721 117 aa8.2□□□□□ -1.1
PRKDC-204ENST00000521331 NAA38Q9BRA0 125 aaKnown RBP8.2□□□□□ -1.1
PRKDC-204ENST00000521331 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
PRKDC-204ENST00000521331 LEPROTO15243 131 aa8.19□□□□□ -1.1
PRKDC-204ENST00000521331 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms