RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
SQLE-205ENST00000521232 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
SQLE-205ENST00000521232 Q6ZRX8 168 aa9.79□□□□□ -0.84
SQLE-205ENST00000521232 LITAFQ99732 161 aa9.79□□□□□ -0.84
SQLE-205ENST00000521232 Q9BRP9 147 aa9.79□□□□□ -0.84
SQLE-205ENST00000521232 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
SQLE-205ENST00000521232 TIMM17BO60830 172 aa9.78□□□□□ -0.84
SQLE-205ENST00000521232 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
SQLE-205ENST00000521232 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
SQLE-205ENST00000521232 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
SQLE-205ENST00000521232 Q8NBF4 154 aa9.76□□□□□ -0.85
SQLE-205ENST00000521232 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
SQLE-205ENST00000521232 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
SQLE-205ENST00000521232 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
SQLE-205ENST00000521232 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
SQLE-205ENST00000521232 MUC17Q685J3 4493 aa9.74□□□□□ -0.85
SQLE-205ENST00000521232 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
SQLE-205ENST00000521232 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
SQLE-205ENST00000521232 CBY1Q9Y3M2 126 aa9.74□□□□□ -0.85
SQLE-205ENST00000521232 KRTDAPP60985 99 aa9.73□□□□□ -0.85
SQLE-205ENST00000521232 TTTY13Q9BZ97 58 aa9.73□□□□□ -0.85
SQLE-205ENST00000521232 SPINK1P00995 79 aa9.72□□□□□ -0.85
SQLE-205ENST00000521232 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
SQLE-205ENST00000521232 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
SQLE-205ENST00000521232 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
SQLE-205ENST00000521232 C5orf52A6NGY3 159 aa9.69□□□□□ -0.86
SQLE-205ENST00000521232 MOBPQ13875 183 aa9.69□□□□□ -0.86
SQLE-205ENST00000521232 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
SQLE-205ENST00000521232 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
SQLE-205ENST00000521232 CDIP1Q9H305 208 aa9.69□□□□□ -0.86
SQLE-205ENST00000521232 C20orf202A1L168 122 aa9.68□□□□□ -0.86
SQLE-205ENST00000521232 LINC00518Q8N0U6 118 aa9.68□□□□□ -0.86
SQLE-205ENST00000521232 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
SQLE-205ENST00000521232 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
SQLE-205ENST00000521232 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
SQLE-205ENST00000521232 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
SQLE-205ENST00000521232 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.86
SQLE-205ENST00000521232 AKR1D1P51857 326 aa9.64□□□□□ -0.87
SQLE-205ENST00000521232 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
SQLE-205ENST00000521232 DHRS4-AS1Q9P1J3 65 aa9.63□□□□□ -0.87
SQLE-205ENST00000521232 IFITM1P13164 125 aa9.62□□□□□ -0.87
SQLE-205ENST00000521232 SPRR1BP22528 89 aa9.62□□□□□ -0.87
SQLE-205ENST00000521232 Q6ZVH6 145 aa9.62□□□□□ -0.87
SQLE-205ENST00000521232 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
SQLE-205ENST00000521232 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
SQLE-205ENST00000521232 Q8N377 158 aa9.61□□□□□ -0.87
SQLE-205ENST00000521232 FAT4Q6V0I7 4981 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 A0A0U1RQV1 116 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 COX7BP24311 80 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 C6orf99Q4VX62 202 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 PCP2Q8IVA1 136 aa9.6□□□□□ -0.87
SQLE-205ENST00000521232 SNRPEP62304 92 aaKnown RBP9.59□□□□□ -0.87
SQLE-205ENST00000521232 TRBV7-6A0A0J9YX20 115 aa9.58□□□□□ -0.88
SQLE-205ENST00000521232 SLC25A20O43772 301 aa9.58□□□□□ -0.88
SQLE-205ENST00000521232 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
SQLE-205ENST00000521232 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
SQLE-205ENST00000521232 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
SQLE-205ENST00000521232 HIST1H2BLQ99880 126 aa9.56□□□□□ -0.88
SQLE-205ENST00000521232 S100A1P23297 94 aa9.55□□□□□ -0.88
SQLE-205ENST00000521232 A6NDN8 102 aa9.54□□□□□ -0.88
SQLE-205ENST00000521232 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
SQLE-205ENST00000521232 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
SQLE-205ENST00000521232 S100A2P29034 98 aa9.53□□□□□ -0.88
SQLE-205ENST00000521232 TAL2Q16559 108 aa9.52□□□□□ -0.89
SQLE-205ENST00000521232 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
SQLE-205ENST00000521232 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
SQLE-205ENST00000521232 DEFB105AQ8NG35 78 aa9.5□□□□□ -0.89
SQLE-205ENST00000521232 A4D1N5 150 aa9.49□□□□□ -0.89
SQLE-205ENST00000521232 HSBP1L1C9JCN9 74 aa9.48□□□□□ -0.89
SQLE-205ENST00000521232 S100A6P06703 90 aa9.48□□□□□ -0.89
SQLE-205ENST00000521232 ASB16-AS1Q495Z4 193 aa9.48□□□□□ -0.89
SQLE-205ENST00000521232 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
SQLE-205ENST00000521232 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
SQLE-205ENST00000521232 Q1RN00 199 aa9.47□□□□□ -0.89
SQLE-205ENST00000521232 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
SQLE-205ENST00000521232 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
SQLE-205ENST00000521232 HRCT1Q6UXD1 115 aa9.46□□□□□ -0.9
SQLE-205ENST00000521232 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
SQLE-205ENST00000521232 PRO1933Q9H354 126 aa9.46□□□□□ -0.9
SQLE-205ENST00000521232 CD164Q04900 197 aa9.45□□□□□ -0.9
SQLE-205ENST00000521232 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
SQLE-205ENST00000521232 NHP2Q9NX24 153 aaKnown RBP9.44□□□□□ -0.9
SQLE-205ENST00000521232 SEC61BP60468 96 aaKnown RBP9.43□□□□□ -0.9
SQLE-205ENST00000521232 XP32Q5T750 250 aa9.42□□□□□ -0.9
SQLE-205ENST00000521232 SCGB1D1O95968 90 aa9.4□□□□□ -0.9
SQLE-205ENST00000521232 VAMP3Q15836 100 aa9.4□□□□□ -0.9
SQLE-205ENST00000521232 H7C2G1 150 aa9.39□□□□□ -0.91
SQLE-205ENST00000521232 Q5XG85 94 aa9.39□□□□□ -0.91
SQLE-205ENST00000521232 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
SQLE-205ENST00000521232 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
SQLE-205ENST00000521232 COX8AP10176 69 aa9.36□□□□□ -0.91
SQLE-205ENST00000521232 A0A0G2JQZ4 141 aa9.34□□□□□ -0.91
SQLE-205ENST00000521232 hADV29S1A0JD25 119 aa9.34□□□□□ -0.91
SQLE-205ENST00000521232 DLEU1O43261 78 aa9.34□□□□□ -0.91
SQLE-205ENST00000521232 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
SQLE-205ENST00000521232 C1orf195Q5TG92 126 aa9.31□□□□□ -0.92
SQLE-205ENST00000521232 Q6ZQY7 126 aa9.31□□□□□ -0.92
SQLE-205ENST00000521232 C12orf57Q99622 126 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms