RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 CASC10Q5T4H9 136 aa4.42□□□□□ -1.7
TVP23C-206ENST00000521179 LINC00242Q5T6M2 205 aa4.42□□□□□ -1.7
TVP23C-206ENST00000521179 LINC01561Q8N1V8 128 aa4.42□□□□□ -1.7
TVP23C-206ENST00000521179 TMEM243Q9BU79 118 aa4.42□□□□□ -1.7
TVP23C-206ENST00000521179 LAMTOR3Q9UHA4 124 aa4.42□□□□□ -1.7
TVP23C-206ENST00000521179 ERC2-IT1O76042 136 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 DEFB1P60022 68 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 SOSTDC1Q6X4U4 206 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 SND1-IT1Q9HBX3 110 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
TVP23C-206ENST00000521179 HERC1Q15751 4861 aa4.4□□□□□ -1.7
TVP23C-206ENST00000521179 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
TVP23C-206ENST00000521179 CXCL6P80162 114 aa4.4□□□□□ -1.71
TVP23C-206ENST00000521179 DSCR8Q96T75 97 aa4.4□□□□□ -1.71
TVP23C-206ENST00000521179 XCL2Q9UBD3 114 aa4.4□□□□□ -1.71
TVP23C-206ENST00000521179 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 DEFB4AO15263 64 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
TVP23C-206ENST00000521179 XCL1P47992 114 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
TVP23C-206ENST00000521179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.38□□□□□ -1.71
TVP23C-206ENST00000521179 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 TRBV6-4A0A1B0GX49 114 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 IGKV2-29A2NJV5 120 aaPredicted RBP4.38□□□□□ -1.71
TVP23C-206ENST00000521179 H7BZZ5 65 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 K7EQD1 137 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 INSP01308 110 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 LINC00337Q8N6G1 96 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 CSNK1G2-AS1Q8NCQ2 148 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 CDC42SE2Q9NRR3 84 aa4.38□□□□□ -1.71
TVP23C-206ENST00000521179 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 UBE2L6O14933 153 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 LECT2O14960 151 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 IGKV2D-28P01615 120 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 MIFP14174 115 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 COX17Q14061 63 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 MIR7-3HGQ8N6C7 128 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 C11orf45Q8TAV5 145 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 C11orf68Q9H3H3 251 aaKnown RBP4.37□□□□□ -1.71
TVP23C-206ENST00000521179 Q9HAA7 133 aa4.37□□□□□ -1.71
TVP23C-206ENST00000521179 STARD9Q9P2P6 4700 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 LCE6AA0A183 80 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 OXTP01178 125 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 Q8NAQ8 132 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 Q8NBF4 154 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 C11orf72Q8NBR9 251 aa4.36□□□□□ -1.71
TVP23C-206ENST00000521179 A0A087WZ39 114 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 CCL18P55774 89 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 LINC00158P58513 81 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 COX6A2Q02221 97 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 Q8N814 137 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
TVP23C-206ENST00000521179 A0A087WVE0 104 aa4.34□□□□□ -1.71
TVP23C-206ENST00000521179 RNASE13Q5GAN3 156 aaKnown RBP4.34□□□□□ -1.71
TVP23C-206ENST00000521179 C1orf158Q8N1D5 194 aa4.34□□□□□ -1.71
TVP23C-206ENST00000521179 C6orf223Q8N319 242 aa4.34□□□□□ -1.71
TVP23C-206ENST00000521179 IGHV3OR16-9A0A0B4J2B5 98 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 A0A1B0GW54 56 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 NCR3O14931 201 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 PRM2P04554 102 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 SPART-AS1P0CW21 52 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 HTN1P15515 57 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
TVP23C-206ENST00000521179 SS18Q15532 418 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 Q8IZM0 81 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
TVP23C-206ENST00000521179 TRAV23DV6A0A075B6W5 121 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 DEFB131BA0A096LNP1 70 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 TRAV10A0A0B4J240 114 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 LY6G6CO95867 125 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 ENHOQ6UWT2 76 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 Q6ZQT0 140 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 DEFB104AQ8WTQ1 72 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 V9GYY9 64 aa4.32□□□□□ -1.72
TVP23C-206ENST00000521179 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
TVP23C-206ENST00000521179 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
TVP23C-206ENST00000521179 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 A0A0U1RRA0 63 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 DEFB130BP0DP73 79 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 DEFB130AP0DP74 79 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 HTN3P15516 51 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 DSCR10P59022 87 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 DAD1P61803 113 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
TVP23C-206ENST00000521179 C16orf74Q96GX8 76 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
TVP23C-206ENST00000521179 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
TVP23C-206ENST00000521179 LYRM9A8MSI8 78 aa4.29□□□□□ -1.72
TVP23C-206ENST00000521179 F8WEM9 126 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms