RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	TRBV7-6	A0A0J9YX20	115 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	NUPR2	A6NF83	97 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	RPS28	P62857	69 aa	Known RBP	5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	C6orf223	Q8N319	242 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	C2orf48	Q96LS8	159 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	DSCR8	Q96T75	97 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	LAMTOR3	Q9UHA4	124 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	PCLO	Q9Y6V0	5065 aa		5.84	□□□□□ -1.47
CTNNA1-223	ENST00000520520	IGLV10-54	A0A075B6I4	117 aa		5.83	□□□□□ -1.48
CTNNA1-223	ENST00000520520		F8WDY8	70 aa		5.83	□□□□□ -1.48
CTNNA1-223	ENST00000520520	IGLV6-57	P01721	117 aa		5.83	□□□□□ -1.48
CTNNA1-223	ENST00000520520	C9orf129	Q5T035	196 aa	Known RBP	5.83	□□□□□ -1.48
CTNNA1-223	ENST00000520520	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.83	□□□□□ -1.48
CTNNA1-223	ENST00000520520	TRAV23DV6	A0A075B6W5	121 aa		5.82	□□□□□ -1.48
CTNNA1-223	ENST00000520520	LYPD5	Q6UWN5	251 aa		5.82	□□□□□ -1.48
CTNNA1-223	ENST00000520520	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.82	□□□□□ -1.48
CTNNA1-223	ENST00000520520	PRR34	Q9NV39	138 aa		5.82	□□□□□ -1.48
CTNNA1-223	ENST00000520520	DNAH10	Q8IVF4	4471 aa		5.82	□□□□□ -1.48
CTNNA1-223	ENST00000520520	COX7B	P24311	80 aa		5.81	□□□□□ -1.48
CTNNA1-223	ENST00000520520		Q6ZQT0	140 aa		5.81	□□□□□ -1.48
CTNNA1-223	ENST00000520520		Q8NAQ8	132 aa		5.81	□□□□□ -1.48
CTNNA1-223	ENST00000520520	UPK3B	Q9BT76	320 aa		5.81	□□□□□ -1.48
CTNNA1-223	ENST00000520520	KIAA1109	Q2LD37	5005 aa		5.8	□□□□□ -1.48
CTNNA1-223	ENST00000520520		H3BNG1	76 aa		5.8	□□□□□ -1.48
CTNNA1-223	ENST00000520520	CXCL6	P80162	114 aa		5.8	□□□□□ -1.48
CTNNA1-223	ENST00000520520	HECTD4	Q9Y4D8	3996 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520		A0A087WVE0	104 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	DEFB4A	O15263	64 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	HTN3	P15516	51 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	PRR3	P79522	188 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	KLK12	Q9UKR0	248 aa		5.79	□□□□□ -1.48
CTNNA1-223	ENST00000520520	TRAV7	A0A075B6U4	112 aa		5.78	□□□□□ -1.48
CTNNA1-223	ENST00000520520	C9orf116	Q5BN46	136 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-223	ENST00000520520	ENHO	Q6UWT2	76 aa		5.78	□□□□□ -1.48
CTNNA1-223	ENST00000520520	RYR1	P21817	5038 aa		5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520		M0R378	163 aa		5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520	ZNF73	O43830	326 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520	ELOF1	P60002	83 aa	Known RBP	5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520		Q6ZQY7	126 aa		5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520	CAMK2N2	Q96S95	79 aa		5.77	□□□□□ -1.49
CTNNA1-223	ENST00000520520	LOC107984640	A0A0U1RRK4	108 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	C10orf25	Q5T742	122 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520		Q6ZVQ6	151 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	C11orf45	Q8TAV5	145 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	C6orf48	Q9UBA6	75 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	CELA1	Q9UNI1	258 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	VPS13D	Q5THJ4	4388 aa		5.76	□□□□□ -1.49
CTNNA1-223	ENST00000520520	NDUFC1	O43677	76 aa		5.75	□□□□□ -1.49
CTNNA1-223	ENST00000520520	ATP5E	P56381	51 aa	Predicted RBP	5.75	□□□□□ -1.49
CTNNA1-223	ENST00000520520	LINC01547	P58512	204 aa	Predicted RBP	5.75	□□□□□ -1.49
CTNNA1-223	ENST00000520520	FAM236D	A0A1B0GTK5	79 aa		5.74	□□□□□ -1.49
CTNNA1-223	ENST00000520520	FAM236C	P0DP71	79 aa		5.74	□□□□□ -1.49
CTNNA1-223	ENST00000520520	HAMP	P81172	84 aa		5.74	□□□□□ -1.49
CTNNA1-223	ENST00000520520	TRBV7-4	A0A0J9YYF1	115 aa		5.73	□□□□□ -1.49
CTNNA1-223	ENST00000520520	VPREB1	P12018	145 aa		5.73	□□□□□ -1.49
CTNNA1-223	ENST00000520520	FAM19A1	Q7Z5A9	133 aa		5.73	□□□□□ -1.49
CTNNA1-223	ENST00000520520		Q8NDZ9	215 aa		5.73	□□□□□ -1.49
CTNNA1-223	ENST00000520520	C1orf43	Q9BWL3	253 aa		5.73	□□□□□ -1.49
CTNNA1-223	ENST00000520520		A0A1B0GW54	56 aa		5.72	□□□□□ -1.49
CTNNA1-223	ENST00000520520	C5orf47	Q569G3	176 aa		5.72	□□□□□ -1.49
CTNNA1-223	ENST00000520520	DPH3	Q96FX2	82 aa		5.72	□□□□□ -1.49
CTNNA1-223	ENST00000520520	ABCA13	Q86UQ4	5058 aa		5.72	□□□□□ -1.49
CTNNA1-223	ENST00000520520		M0R2N4	97 aa		5.71	□□□□□ -1.5
CTNNA1-223	ENST00000520520	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNA1-223	ENST00000520520	C20orf197	Q8N268	126 aa		5.71	□□□□□ -1.5
CTNNA1-223	ENST00000520520	NKAPP1	Q8N9T2	125 aa		5.71	□□□□□ -1.5
CTNNA1-223	ENST00000520520	XAGE1A	Q9HD64	81 aa		5.71	□□□□□ -1.5
CTNNA1-223	ENST00000520520	KLKP1	Q107X0	134 aa		5.7	□□□□□ -1.5
CTNNA1-223	ENST00000520520	APLN	Q9ULZ1	77 aa		5.7	□□□□□ -1.5
CTNNA1-223	ENST00000520520	PLA2G2D	Q9UNK4	145 aa		5.7	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DNAH2	Q9P225	4427 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	ERC2-IT1	O76042	136 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	HIGD2B	Q4VC39	106 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	LINC01556	Q5JQF7	62 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520		Q6ZTC4	211 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	WFDC10B	Q8IUB3	73 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DHRS4-AS1	Q9P1J3	65 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	SERP1	Q9Y6X1	66 aa		5.69	□□□□□ -1.5
CTNNA1-223	ENST00000520520	PRY	O14603	147 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520	SYCN	Q0VAF6	134 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520		Q6ZRU5	148 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520	C15orf56	Q8N910	161 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520	RMI2	Q96E14	147 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DNAH6	Q9C0G6	4158 aa		5.68	□□□□□ -1.5
CTNNA1-223	ENST00000520520	PKHD1	P08F94	4074 aa		5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	FAT2	Q9NYQ8	4349 aa		5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	IGKV2D-24	A0A075B6R9	120 aa		5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	TRAV10	A0A0B4J240	114 aa		5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	FUS	P35637	526 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DYNC1H1	Q14204	4646 aa	Known RBP	5.67	□□□□□ -1.5
CTNNA1-223	ENST00000520520	NREP	Q16612	68 aa		5.66	□□□□□ -1.5
CTNNA1-223	ENST00000520520	KRTAP26-1	Q6PEX3	210 aa		5.66	□□□□□ -1.5
CTNNA1-223	ENST00000520520	LINC00336	Q6ZUF6	198 aa		5.66	□□□□□ -1.5
CTNNA1-223	ENST00000520520	CYSTM1	Q9H1C7	97 aa		5.66	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DNAH17	Q9UFH2	4485 aa		5.65	□□□□□ -1.5
CTNNA1-223	ENST00000520520	DEFB131B	A0A096LNP1	70 aa		5.65	□□□□□ -1.5
CTNNA1-223	ENST00000520520		A0A1B0GVY2	172 aa		5.65	□□□□□ -1.5
CTNNA1-223	ENST00000520520	TLX1NB	P0CAT3	122 aa		5.65	□□□□□ -1.5
CTNNA1-223	ENST00000520520	UBE2DNL	Q8IWF7	75 aa		5.65	□□□□□ -1.5

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