RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
VEGFA-220ENST00000519767 C5orf52A6NGY3 159 aa14.3□□□□□ -0.12
VEGFA-220ENST00000519767 HINT1P49773 126 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-220ENST00000519767 FAT4Q6V0I7 4981 aa14.29□□□□□ -0.12
VEGFA-220ENST00000519767 EIF4EBP3O60516 100 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-220ENST00000519767 NPC2P61916 151 aa14.29□□□□□ -0.12
VEGFA-220ENST00000519767 KRTAP13-3Q3SY46 172 aa14.29□□□□□ -0.12
VEGFA-220ENST00000519767 MUC17Q685J3 4493 aa14.27□□□□□ -0.12
VEGFA-220ENST00000519767 SLC25A20O43772 301 aa14.26□□□□□ -0.13
VEGFA-220ENST00000519767 TIMM17BO60830 172 aa14.26□□□□□ -0.13
VEGFA-220ENST00000519767 SPANXCQ9NY87 97 aa14.26□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BKO60814 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BJP06899 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BOP23527 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BBP33778 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BDP58876 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BCP62807 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST2H2BEQ16778 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-220ENST00000519767 LCE2AQ5TA79 106 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BHQ93079 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BNQ99877 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 HIST1H2BMQ99879 126 aa14.25□□□□□ -0.13
VEGFA-220ENST00000519767 LINC01545Q5VT33 79 aa14.24□□□□□ -0.13
VEGFA-220ENST00000519767 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
VEGFA-220ENST00000519767 Q8N377 158 aa14.24□□□□□ -0.13
VEGFA-220ENST00000519767 LINC00308Q8TCZ7 52 aa14.24□□□□□ -0.13
VEGFA-220ENST00000519767 LITAFQ99732 161 aa14.23□□□□□ -0.13
VEGFA-220ENST00000519767 OR13C6PQ8NH95 151 aa14.21□□□□□ -0.13
VEGFA-220ENST00000519767 ASB16-AS1Q495Z4 193 aa14.2□□□□□ -0.14
VEGFA-220ENST00000519767 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
VEGFA-220ENST00000519767 ST20-AS1Q8NBB2 130 aa14.19□□□□□ -0.14
VEGFA-220ENST00000519767 LINC00518Q8N0U6 118 aa14.18□□□□□ -0.14
VEGFA-220ENST00000519767 SPANXDQ9BXN6 97 aa14.18□□□□□ -0.14
VEGFA-220ENST00000519767 DHRS4-AS1Q9P1J3 65 aa14.18□□□□□ -0.14
VEGFA-220ENST00000519767 ZNF815PA8K554 130 aa14.17□□□□□ -0.14
VEGFA-220ENST00000519767 SLC25A34Q6PIV7 304 aa14.17□□□□□ -0.14
VEGFA-220ENST00000519767 SEC61BP60468 96 aaKnown RBP14.16□□□□□ -0.14
VEGFA-220ENST00000519767 SPRR1BP22528 89 aa14.14□□□□□ -0.15
VEGFA-220ENST00000519767 C3orf79P0CE67 100 aa14.12□□□□□ -0.15
VEGFA-220ENST00000519767 LAMTOR3Q9UHA4 124 aa14.09□□□□□ -0.15
VEGFA-220ENST00000519767 COX7BP24311 80 aa14.08□□□□□ -0.16
VEGFA-220ENST00000519767 COA6Q5JTJ3 125 aaKnown RBP14.08□□□□□ -0.16
VEGFA-220ENST00000519767 COPS9Q8WXC6 57 aa14.08□□□□□ -0.16
VEGFA-220ENST00000519767 TTTY13Q9BZ97 58 aa14.08□□□□□ -0.16
VEGFA-220ENST00000519767 ELOF1P60002 83 aaKnown RBP14.07□□□□□ -0.16
VEGFA-220ENST00000519767 KRTAP9-2Q9BYQ4 174 aa14.07□□□□□ -0.16
VEGFA-220ENST00000519767 KRTDAPP60985 99 aa14.06□□□□□ -0.16
VEGFA-220ENST00000519767 C6orf99Q4VX62 202 aa14.05□□□□□ -0.16
VEGFA-220ENST00000519767 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
VEGFA-220ENST00000519767 TRBV7-6A0A0J9YX20 115 aa14.04□□□□□ -0.16
VEGFA-220ENST00000519767 C20orf202A1L168 122 aa14.04□□□□□ -0.16
VEGFA-220ENST00000519767 XP32Q5T750 250 aa14.04□□□□□ -0.16
VEGFA-220ENST00000519767 LIMD2Q9BT23 127 aa14.04□□□□□ -0.16
VEGFA-220ENST00000519767 TAL2Q16559 108 aa14.03□□□□□ -0.16
VEGFA-220ENST00000519767 IFITM1P13164 125 aa14.02□□□□□ -0.17
VEGFA-220ENST00000519767 Q6ZVH6 145 aa14.01□□□□□ -0.17
VEGFA-220ENST00000519767 AKR1D1P51857 326 aa14□□□□□ -0.17
VEGFA-220ENST00000519767 TEX49A0A1B0GTD5 131 aa13.98□□□□□ -0.17
VEGFA-220ENST00000519767 CD164Q04900 197 aa13.98□□□□□ -0.17
VEGFA-220ENST00000519767 LINC01547P58512 204 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-220ENST00000519767 HRCT1Q6UXD1 115 aa13.97□□□□□ -0.17
VEGFA-220ENST00000519767 DEFB105AQ8NG35 78 aa13.97□□□□□ -0.17
VEGFA-220ENST00000519767 KRTAP4-1Q9BYQ7 146 aa13.96□□□□□ -0.17
VEGFA-220ENST00000519767 PRO1933Q9H354 126 aa13.96□□□□□ -0.17
VEGFA-220ENST00000519767 A0A1B0GWB2 263 aa13.95□□□□□ -0.18
VEGFA-220ENST00000519767 ANKRD39Q53RE8 183 aa13.95□□□□□ -0.18
VEGFA-220ENST00000519767 A6NDN8 102 aa13.94□□□□□ -0.18
VEGFA-220ENST00000519767 Q1RN00 199 aa13.93□□□□□ -0.18
VEGFA-220ENST00000519767 A4D1N5 150 aa13.92□□□□□ -0.18
VEGFA-220ENST00000519767 MUSTN1Q8IVN3 82 aa13.92□□□□□ -0.18
VEGFA-220ENST00000519767 SNRPEP62304 92 aaKnown RBP13.9□□□□□ -0.18
VEGFA-220ENST00000519767 ATOH7Q8N100 152 aa13.9□□□□□ -0.18
VEGFA-220ENST00000519767 H7C2G1 150 aa13.89□□□□□ -0.19
VEGFA-220ENST00000519767 IGLV5-48A0A075B6I7 105 aa13.88□□□□□ -0.19
VEGFA-220ENST00000519767 TRAV13-2A0A0B4J235 113 aa13.88□□□□□ -0.19
VEGFA-220ENST00000519767 PCP2Q8IVA1 136 aa13.88□□□□□ -0.19
VEGFA-220ENST00000519767 Q5XG85 94 aa13.87□□□□□ -0.19
VEGFA-220ENST00000519767 SMIM29Q86T20 159 aa13.87□□□□□ -0.19
VEGFA-220ENST00000519767 S100A1P23297 94 aa13.86□□□□□ -0.19
VEGFA-220ENST00000519767 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
VEGFA-220ENST00000519767 SMIM11BQ8TCY0 68 aa13.81□□□□□ -0.2
VEGFA-220ENST00000519767 C9orf92A6NGG3 77 aa13.8□□□□□ -0.2
VEGFA-220ENST00000519767 VAMP3Q15836 100 aa13.79□□□□□ -0.2
VEGFA-220ENST00000519767 PCOTHQ58A44 107 aa13.77□□□□□ -0.21
VEGFA-220ENST00000519767 C1orf195Q5TG92 126 aa13.75□□□□□ -0.21
VEGFA-220ENST00000519767 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
VEGFA-220ENST00000519767 S100A2P29034 98 aa13.72□□□□□ -0.21
VEGFA-220ENST00000519767 IGLV8-61A0A075B6I0 122 aa13.71□□□□□ -0.21
VEGFA-220ENST00000519767 A0A0G2JQZ4 141 aa13.7□□□□□ -0.22
VEGFA-220ENST00000519767 TCL1BO95988 128 aa13.7□□□□□ -0.22
VEGFA-220ENST00000519767 HIST3H2BBQ8N257 126 aa13.7□□□□□ -0.22
VEGFA-220ENST00000519767 HIST1H2BLQ99880 126 aa13.7□□□□□ -0.22
VEGFA-220ENST00000519767 F8WEM9 126 aa13.69□□□□□ -0.22
VEGFA-220ENST00000519767 LINC00575Q6W349 94 aa13.69□□□□□ -0.22
VEGFA-220ENST00000519767 LCE2CQ5TA81 110 aa13.67□□□□□ -0.22
VEGFA-220ENST00000519767 KRTAP9-6A0A140TA67 174 aa13.65□□□□□ -0.22
VEGFA-220ENST00000519767 hADV29S1A0JD25 119 aa13.65□□□□□ -0.22
VEGFA-220ENST00000519767 Q6JHZ5 121 aa13.63□□□□□ -0.23
VEGFA-220ENST00000519767 KRTAP19-2Q3LHN2 52 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms