RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 EYSQ5T1H1 3165 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 SHPRHQ149N8 1683 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 PREX1Q8TCU6 1659 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 ABCC5O15440 1437 aa-1.97□□□□□ -2.72
PCM1-208ENST00000518877 SMR3BP02814 79 aaPredicted RBP-1.97□□□□□ -2.72
PCM1-208ENST00000518877 UBE2D4Q9Y2X8 147 aa-1.97□□□□□ -2.72
PCM1-208ENST00000518877 LRBAP50851 2863 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 TLN2Q9Y4G6 2542 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 PSMG4Q5JS54 123 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 MON2Q7Z3U7 1717 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 RGPD8O14715 1765 aaPredicted RBP-1.98□□□□□ -2.73
PCM1-208ENST00000518877 RGPD5Q99666 1765 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 SCN11AQ9UI33 1791 aa-1.98□□□□□ -2.73
PCM1-208ENST00000518877 UBR3Q6ZT12 1888 aa-1.99□□□□□ -2.73
PCM1-208ENST00000518877 NAP1L6A6NFF2 107 aa-1.99□□□□□ -2.73
PCM1-208ENST00000518877 K7EP13 123 aa-1.99□□□□□ -2.73
PCM1-208ENST00000518877 NDUFA2O43678 99 aa-1.99□□□□□ -2.73
PCM1-208ENST00000518877 PAIP2BQ9ULR5 123 aaKnown RBP-1.99□□□□□ -2.73
PCM1-208ENST00000518877 AP4S1Q9Y587 144 aa-1.99□□□□□ -2.73
PCM1-208ENST00000518877 SCAPERQ9BY12 1400 aa-2□□□□□ -2.73
PCM1-208ENST00000518877 ATP5EP56381 51 aaPredicted RBP-2□□□□□ -2.73
PCM1-208ENST00000518877 MT1LQ93083 61 aa-2□□□□□ -2.73
PCM1-208ENST00000518877 TOPAZ1Q8N9V7 1692 aa-2□□□□□ -2.73
PCM1-208ENST00000518877 SAMD9Q5K651 1589 aa-2.01□□□□□ -2.73
PCM1-208ENST00000518877 C5P01031 1676 aa-2.01□□□□□ -2.73
PCM1-208ENST00000518877 CLPSL2Q6UWE3 100 aa-2.01□□□□□ -2.73
PCM1-208ENST00000518877 QSER1Q2KHR3 1735 aa-2.01□□□□□ -2.73
PCM1-208ENST00000518877 MYO9AB2RTY4 2548 aa-2.02□□□□□ -2.73
PCM1-208ENST00000518877 TMEM262E9PQX1 116 aa-2.02□□□□□ -2.73
PCM1-208ENST00000518877 AKAIN1P0CW23 69 aa-2.02□□□□□ -2.73
PCM1-208ENST00000518877 C1orf54Q8WWF1 131 aa-2.02□□□□□ -2.73
PCM1-208ENST00000518877 FAM24AA6NFZ4 105 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 CRYM-AS1A6NIL9 109 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 C3orf79P0CE67 100 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 CGREF1Q99674 301 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 CFAP46Q8IYW2 2715 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 NAIPQ13075 1403 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 PLXNC1O60486 1568 aa-2.03□□□□□ -2.73
PCM1-208ENST00000518877 ASIPP42127 132 aa-2.04□□□□□ -2.74
PCM1-208ENST00000518877 MAGI2Q86UL8 1455 aa-2.04□□□□□ -2.74
PCM1-208ENST00000518877 KTN1Q86UP2 1357 aaKnown RBP-2.04□□□□□ -2.74
PCM1-208ENST00000518877 PRO3102Q9H379 93 aa-2.04□□□□□ -2.74
PCM1-208ENST00000518877 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.04□□□□□ -2.74
PCM1-208ENST00000518877 RGPD3A6NKT7 1758 aaPredicted RBP-2.05□□□□□ -2.74
PCM1-208ENST00000518877 RGPD4Q7Z3J3 1758 aa-2.05□□□□□ -2.74
PCM1-208ENST00000518877 MT1GP13640 62 aa-2.05□□□□□ -2.74
PCM1-208ENST00000518877 COX7BP24311 80 aa-2.05□□□□□ -2.74
PCM1-208ENST00000518877 LINC00158P58513 81 aa-2.05□□□□□ -2.74
PCM1-208ENST00000518877 RPL38P63173 70 aaKnown RBP-2.05□□□□□ -2.74
PCM1-208ENST00000518877 CUL7Q14999 1698 aa-2.06□□□□□ -2.74
PCM1-208ENST00000518877 IGLC2P0DOY2 106 aa-2.06□□□□□ -2.74
PCM1-208ENST00000518877 IGLC3P0DOY3 106 aa-2.06□□□□□ -2.74
PCM1-208ENST00000518877 TIAM2Q8IVF5 1701 aa-2.06□□□□□ -2.74
PCM1-208ENST00000518877 FAM135AQ9P2D6 1515 aa-2.07□□□□□ -2.74
PCM1-208ENST00000518877 LRRC9Q6ZRR7 1453 aa-2.07□□□□□ -2.74
PCM1-208ENST00000518877 TRBV25-1A0A075B6N4 114 aa-2.07□□□□□ -2.74
PCM1-208ENST00000518877 KRTDAPP60985 99 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 PMCHL1Q16048 86 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 CCDC58Q4VC31 144 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 DEFB106AQ8N104 65 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 MT1MQ8N339 61 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 PKD1L3Q7Z443 1732 aa-2.08□□□□□ -2.74
PCM1-208ENST00000518877 USP32Q8NFA0 1604 aa-2.09□□□□□ -2.74
PCM1-208ENST00000518877 MT2AP02795 61 aa-2.09□□□□□ -2.74
PCM1-208ENST00000518877 CACFD1Q9UGQ2 172 aa-2.09□□□□□ -2.74
PCM1-208ENST00000518877 CHD1O14646 1710 aa-2.1□□□□□ -2.75
PCM1-208ENST00000518877 CDC42BPAQ5VT25 1732 aa-2.1□□□□□ -2.75
PCM1-208ENST00000518877 TMEM218A2RU14 115 aa-2.1□□□□□ -2.75
PCM1-208ENST00000518877 SNAPC5O75971 98 aa-2.1□□□□□ -2.75
PCM1-208ENST00000518877 KRTAP8-1Q8IUC2 63 aa-2.1□□□□□ -2.75
PCM1-208ENST00000518877 CRYBG1Q9Y4K1 1723 aa-2.11□□□□□ -2.75
PCM1-208ENST00000518877 WIZO95785 1651 aa-2.11□□□□□ -2.75
PCM1-208ENST00000518877 ABCC10Q5T3U5 1492 aa-2.11□□□□□ -2.75
PCM1-208ENST00000518877 ARHGAP5Q13017 1502 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 ADGRG4Q8IZF6 3080 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 H3BQ15 152 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 ALKAL2Q6UX46 152 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 SERP2Q8N6R1 65 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 ROCK2O75116 1388 aaKnown RBP-2.12□□□□□ -2.75
PCM1-208ENST00000518877 ABCC2Q92887 1545 aa-2.12□□□□□ -2.75
PCM1-208ENST00000518877 DEPDC5O75140 1603 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 hADV29S1A0JD25 119 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 MT1BP07438 61 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 TNP1P09430 55 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 SVBPQ8N300 66 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 MAGI3Q5TCQ9 1506 aa-2.13□□□□□ -2.75
PCM1-208ENST00000518877 SPTAN1Q13813 2472 aaKnown RBP-2.13□□□□□ -2.75
PCM1-208ENST00000518877 MYOM2P54296 1465 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 MMP24-AS1A0A0U1RRL7 71 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 D6R8Y8 96 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 UQCRHP07919 91 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 DEFB130BP0DP73 79 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 DEFB130AP0DP74 79 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 MUSTN1Q8IVN3 82 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 TRGV9Q99603 122 aa-2.14□□□□□ -2.75
PCM1-208ENST00000518877 CC2D2AQ9P2K1 1620 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 NDUFC1O43677 76 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 LEPROTL1O95214 131 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 MPC2O95563 127 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 HMGN3Q15651 99 aa-2.15□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 429.6 ms