RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 LELP1Q5T871 98 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 CLPSL2Q6UWE3 100 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 A8MUU9 505 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 TLX1NBP0CAT3 122 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 RPL37AP61513 92 aaKnown RBP2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 LY6EQ16553 131 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 BRD3OSQ6XYD6 125 aa2.91□□□□□ -1.94
HMGB1P19-201ENST00000517578 KRTAP4-16G5E9R7 235 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB113Q30KQ7 82 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP24-1Q3LI83 254 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 Q5W150 140 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 CSNK1G2-AS1Q8NCQ2 148 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 C4orf3Q8WVX3 66 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 APC2O95996 2303 aa2.9□□□□□ -1.95
HMGB1P19-201ENST00000517578 SRCAPQ6ZRS2 3230 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 WNK1Q9H4A3 2382 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 P0C880 135 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 DNAH10OSP0CZ25 163 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 TMEM105Q8N8V8 129 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 CCL19Q99731 98 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 ANAPC11Q9NYG5 84 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 TPRP12270 2363 aaKnown RBP2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 PKDREJQ9NTG1 2253 aa2.89□□□□□ -1.95
HMGB1P19-201ENST00000517578 GOLGB1Q14789 3259 aaKnown RBP2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 LY6G6CO95867 125 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPRR1BP22528 89 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 SPTBN2O15020 2390 aa2.88□□□□□ -1.95
HMGB1P19-201ENST00000517578 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB130BP0DP73 79 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB130AP0DP74 79 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DEFB132Q7Z7B7 95 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CEP350Q5VT06 3117 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 DNAH12Q6ZR08 3092 aa2.87□□□□□ -1.95
HMGB1P19-201ENST00000517578 CENPFP49454 3210 aa2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 A0A1W2PNU3 283 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 MAP1BP46821 2468 aaKnown RBP2.86□□□□□ -1.95
HMGB1P19-201ENST00000517578 ROS1P08922 2347 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
HMGB1P19-201ENST00000517578 PCNX1Q96RV3 2341 aa2.84□□□□□ -1.95
HMGB1P19-201ENST00000517578 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
HMGB1P19-201ENST00000517578 RP1L1Q8IWN7 2480 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 H3BNG1 76 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 KMT2BQ9UMN6 2715 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P19-201ENST00000517578 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 NOTCH3Q9UM47 2321 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 PANO1I0J062 215 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 DEFB136Q30KP8 78 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A087WTM6 91 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 COX6B2Q6YFQ2 88 aa2.81□□□□□ -1.96
HMGB1P19-201ENST00000517578 MGAQ8IWI9 3026 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 CNOT1A5YKK6 2376 aaKnown RBP2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 AKAP6Q13023 2319 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A096LPF7 62 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 SPART-AS1P0CW21 52 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
HMGB1P19-201ENST00000517578 COL6A3P12111 3177 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 TNRC18O15417 2968 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 TRIOBPQ9H2D6 2365 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 A0A1B0GU33 70 aa2.79□□□□□ -1.96
HMGB1P19-201ENST00000517578 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
HMGB1P19-201ENST00000517578 GPR179Q6PRD1 2367 aa2.78□□□□□ -1.97
HMGB1P19-201ENST00000517578 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 C10orf99Q6UWK7 81 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 Q96NJ1 140 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 PTPRZ1P23471 2315 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 ACACAQ13085 2346 aa2.77□□□□□ -1.97
HMGB1P19-201ENST00000517578 EP300Q09472 2414 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P19-201ENST00000517578 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
HMGB1P19-201ENST00000517578 UTRNP46939 3433 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 C14orf177Q52M58 125 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 LINC01556Q5JQF7 62 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 CACNA1HO95180 2353 aa2.75□□□□□ -1.97
HMGB1P19-201ENST00000517578 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 Q6ZSA8 131 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 PSORS1C2Q9UIG4 136 aa2.74□□□□□ -1.97
HMGB1P19-201ENST00000517578 SPTA1P02549 2419 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 C2CD3Q4AC94 2353 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 RANBP2P49792 3224 aaKnown RBP2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 A0A0G2JQZ4 141 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 NBDYA0A0U1RRE5 68 aa2.73□□□□□ -1.97
HMGB1P19-201ENST00000517578 CIRBP-AS1Q8TBR5 109 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms