RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 LITAFQ99732 161 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SPANXDQ9BXN6 97 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 ZNF73O43830 326 aaPredicted RBP3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 S100A1P23297 94 aa3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 PRR4Q16378 134 aa3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 LINC00518Q8N0U6 118 aa3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 LINC00308Q8TCZ7 52 aa3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SMCR5Q8TEV8 140 aa3.49□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SPINK1P00995 79 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 IFITM1P13164 125 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 KRTDAPP60985 99 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SOSTDC1Q6X4U4 206 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SCGB1D4Q6XE38 83 aa3.48□□□□□ -1.85
SCARNA18.1-201ENST00000516330 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 A0A0U1RQV1 116 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 C4orf48Q5BLP8 95 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 ADAMTSL4-AS1Q5T5F5 129 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 Q9BRP9 147 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 DHRS4-AS1Q9P1J3 65 aa3.47□□□□□ -1.85
SCARNA18.1-201ENST00000516330 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
SCARNA18.1-201ENST00000516330 TSPAN13O95857 204 aa3.46□□□□□ -1.86
SCARNA18.1-201ENST00000516330 S100A2P29034 98 aa3.46□□□□□ -1.86
SCARNA18.1-201ENST00000516330 ELOF1P60002 83 aaKnown RBP3.46□□□□□ -1.86
SCARNA18.1-201ENST00000516330 Q8NBF4 154 aa3.46□□□□□ -1.86
SCARNA18.1-201ENST00000516330 LPAP08519 4548 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 A0A1B0GWB2 263 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 A4D1N5 150 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 HSBP1L1C9JCN9 74 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 S100A6P06703 90 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 SPRR1BP22528 89 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 NPC2P61916 151 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 GAGE2AQ6NT46 116 aa3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
SCARNA18.1-201ENST00000516330 TRAV13-2A0A0B4J235 113 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 EIF4EBP3O60516 100 aaPredicted RBP3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 MOBPQ13875 183 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 ANKRD39Q53RE8 183 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 HIST3H2BBQ8N257 126 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 OR13C6PQ8NH95 151 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 HIST1H2BLQ99880 126 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 LIMD2Q9BT23 127 aa3.44□□□□□ -1.86
SCARNA18.1-201ENST00000516330 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 ERC2-IT1O76042 136 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 COX7BP24311 80 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 C6orf99Q4VX62 202 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 TTTY13Q9BZ97 58 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 CDIP1Q9H305 208 aa3.43□□□□□ -1.86
SCARNA18.1-201ENST00000516330 IGLV9-49A0A0B4J1Y8 123 aa3.42□□□□□ -1.86
SCARNA18.1-201ENST00000516330 SLC25A20O43772 301 aa3.42□□□□□ -1.86
SCARNA18.1-201ENST00000516330 C9orf153Q5TBE3 101 aa3.42□□□□□ -1.86
SCARNA18.1-201ENST00000516330 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
SCARNA18.1-201ENST00000516330 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
SCARNA18.1-201ENST00000516330 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
SCARNA18.1-201ENST00000516330 CD164Q04900 197 aa3.41□□□□□ -1.86
SCARNA18.1-201ENST00000516330 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SCARNA18.1-201ENST00000516330 ATOH7Q8N100 152 aa3.41□□□□□ -1.86
SCARNA18.1-201ENST00000516330 Q8N377 158 aa3.41□□□□□ -1.86
SCARNA18.1-201ENST00000516330 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.87
SCARNA18.1-201ENST00000516330 A6NDN8 102 aa3.4□□□□□ -1.87
SCARNA18.1-201ENST00000516330 MUC2Q02817 5179 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 DLEU1O43261 78 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 BVES-AS1Q5T3Y7 98 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 Q5XG85 94 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 ST20-AS1Q8NBB2 130 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 PPDPFLQ8WWR9 84 aa3.39□□□□□ -1.87
SCARNA18.1-201ENST00000516330 VAMP3Q15836 100 aa3.38□□□□□ -1.87
SCARNA18.1-201ENST00000516330 TAL2Q16559 108 aa3.38□□□□□ -1.87
SCARNA18.1-201ENST00000516330 PRO1933Q9H354 126 aa3.38□□□□□ -1.87
SCARNA18.1-201ENST00000516330 COX8AP10176 69 aa3.37□□□□□ -1.87
SCARNA18.1-201ENST00000516330 SMIM11BQ8TCY0 68 aa3.37□□□□□ -1.87
SCARNA18.1-201ENST00000516330 TMEM238LA0A1B0GVL6 79 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 A6NJY4 79 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 F8WEM9 126 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 ASB16-AS1Q495Z4 193 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
SCARNA18.1-201ENST00000516330 A0A0B4J2C4 111 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 H7C2G1 150 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 SCGB1D1O95968 90 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 GHRHP01286 108 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 Q1RN00 199 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 XP32Q5T750 250 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 Q6JHZ5 121 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 LINC00575Q6W349 94 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
SCARNA18.1-201ENST00000516330 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
SCARNA18.1-201ENST00000516330 hADV29S1A0JD25 119 aa3.34□□□□□ -1.87
SCARNA18.1-201ENST00000516330 SNCGO76070 127 aa3.34□□□□□ -1.87
SCARNA18.1-201ENST00000516330 OCIAD2Q56VL3 154 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms