RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 SPRR2AP35326 72 aa-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 HIGD1BQ9P298 99 aa-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 PDE4DIPQ5VU43 2346 aa-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 TGP01266 2768 aa-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 DOT1LQ8TEK3 1739 aa-0.35□□□□□ -2.47
RNU6-390P-201ENST00000516259 SCN11AQ9UI33 1791 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 ABCC3O15438 1527 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 WFDC13Q8IUB5 93 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 SNHG12Q9BXW3 62 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 CDKN2A-AS1Q9UH64 79 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 KIF14Q15058 1648 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 TRANK1O15050 2925 aa-0.36□□□□□ -2.47
RNU6-390P-201ENST00000516259 ZNF831Q5JPB2 1677 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 EPG5Q9HCE0 2579 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 GYPAP02724 150 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 HMGN2P05204 90 aaKnown RBP-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 COX7BP24311 80 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 PKIAP61925 76 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 PEA15Q15121 130 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 NWD1Q149M9 1564 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
RNU6-390P-201ENST00000516259 NEXMIFQ5QGS0 1516 aa-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 MACF1Q9UPN3 7388 aaKnown RBP-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 SMIM11AP58511 58 aa-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 PLGLAQ15195 96 aa-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 NMSQ5H8A3 153 aa-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
RNU6-390P-201ENST00000516259 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 CCNB3Q8WWL7 1395 aa-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 A0A1B0GUT8 65 aa-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 RPL38P63173 70 aaKnown RBP-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 C20orf78Q9BR46 151 aa-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 DDX60LQ5H9U9 1706 aaKnown RBP-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 USP32Q8NFA0 1604 aa-0.39□□□□□ -2.47
RNU6-390P-201ENST00000516259 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 CYB5AP00167 134 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 PIK3C2BO00750 1634 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 CFAP43Q8NDM7 1665 aa-0.4□□□□□ -2.47
RNU6-390P-201ENST00000516259 MAGI3Q5TCQ9 1506 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 PKD1P98161 4303 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 IQCF6A8MYZ5 107 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 H0YGG7 62 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 SPRR2EP22531 72 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 GAFA1Q96PS6 74 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 PLCH1Q4KWH8 1693 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 PLXNC1O60486 1568 aa-0.41□□□□□ -2.48
RNU6-390P-201ENST00000516259 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.42□□□□□ -2.48
RNU6-390P-201ENST00000516259 NF1P21359 2839 aa-0.42□□□□□ -2.48
RNU6-390P-201ENST00000516259 TNRC18O15417 2968 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-390P-201ENST00000516259 SONP18583 2426 aaKnown RBP-0.43□□□□□ -2.48
RNU6-390P-201ENST00000516259 KRTAP19-8Q3LI54 63 aa-0.43□□□□□ -2.48
RNU6-390P-201ENST00000516259 COX6B2Q6YFQ2 88 aa-0.43□□□□□ -2.48
RNU6-390P-201ENST00000516259 TEP1Q99973 2627 aaKnown RBP-0.43□□□□□ -2.48
RNU6-390P-201ENST00000516259 PRRC2CQ9Y520 2896 aaKnown RBP-0.43□□□□□ -2.48
RNU6-390P-201ENST00000516259 MYMXA0A1B0GTQ4 84 aa-0.44□□□□□ -2.48
RNU6-390P-201ENST00000516259 NDUFA3O95167 84 aa-0.44□□□□□ -2.48
RNU6-390P-201ENST00000516259 WFDC9Q8NEX5 89 aa-0.44□□□□□ -2.48
RNU6-390P-201ENST00000516259 Q9H521 79 aa-0.44□□□□□ -2.48
RNU6-390P-201ENST00000516259 URB2Q14146 1524 aaKnown RBP-0.44□□□□□ -2.48
RNU6-390P-201ENST00000516259 TRAV21A0A0B4J279 112 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 K7EP34 96 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 ITSN1Q15811 1721 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 DIP2BQ9P265 1576 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 ZZEF1O43149 2961 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
RNU6-390P-201ENST00000516259 WIZO95785 1651 aa-0.46□□□□□ -2.48
RNU6-390P-201ENST00000516259 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
RNU6-390P-201ENST00000516259 HIVEP1P15822 2718 aa-0.46□□□□□ -2.48
RNU6-390P-201ENST00000516259 V9GYS6 101 aa-0.46□□□□□ -2.48
RNU6-390P-201ENST00000516259 RICTORQ6R327 1708 aa-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 LYSTQ99698 3801 aa-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 NCOA2Q15596 1464 aa-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 SNRPFP62306 86 aaKnown RBP-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 PYY3Q5JQD4 70 aa-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 S100A16Q96FQ6 103 aaKnown RBP-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 DEPDC5O75140 1603 aa-0.47□□□□□ -2.48
RNU6-390P-201ENST00000516259 CEBPZOSA8MTT3 80 aa-0.48□□□□□ -2.49
RNU6-390P-201ENST00000516259 LINC00643Q86TS7 51 aa-0.48□□□□□ -2.49
RNU6-390P-201ENST00000516259 RABAC1Q9UI14 185 aa-0.48□□□□□ -2.49
RNU6-390P-201ENST00000516259 DSTQ03001 7570 aaKnown RBP-0.48□□□□□ -2.49
RNU6-390P-201ENST00000516259 CCDC88BA6NC98 1476 aa-0.48□□□□□ -2.49
RNU6-390P-201ENST00000516259 RB1CC1Q8TDY2 1594 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 PCLOQ9Y6V0 5065 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 CEP290O15078 2479 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 HTTP42858 3142 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 FASNP49327 2511 aaKnown RBP-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 PVALEFA0A1B0GWK0 134 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 NDUFB1O75438 58 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 GCN1Q92616 2671 aaKnown RBP-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 DNAH6Q9C0G6 4158 aa-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.49□□□□□ -2.49
RNU6-390P-201ENST00000516259 NBPF19A0A087WUL8 3843 aa-0.5□□□□□ -2.49
RNU6-390P-201ENST00000516259 KMT2CQ8NEZ4 4911 aaKnown RBP-0.5□□□□□ -2.49
RNU6-390P-201ENST00000516259 PRO3102Q9H379 93 aa-0.5□□□□□ -2.49
RNU6-390P-201ENST00000516259 ANKRD11Q6UB99 2663 aaPredicted RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms