RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 C16orf74Q96GX8 76 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 NBEAL2Q6ZNJ1 2754 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 Q75L30 129 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 IGLV5-39A0A0G2JS06 123 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 NDUFA1O15239 70 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 CMC4P56277 68 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 KIAA0087Q14695 138 aa5.07□□□□□ -1.6
PDLIM5-219ENST00000514743 TENM1Q9UKZ4 2725 aa5.06□□□□□ -1.6
PDLIM5-219ENST00000514743 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
PDLIM5-219ENST00000514743 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
PDLIM5-219ENST00000514743 CDC42SE2Q9NRR3 84 aa5.06□□□□□ -1.6
PDLIM5-219ENST00000514743 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
PDLIM5-219ENST00000514743 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
PDLIM5-219ENST00000514743 TRBV6-4A0A1B0GX49 114 aa5.05□□□□□ -1.6
PDLIM5-219ENST00000514743 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
PDLIM5-219ENST00000514743 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 OCR1Q9BZK8 76 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 FAM30AQ9NZY2 134 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 IGHV6-1A0A0B4J1U7 121 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 C3orf84H3BNL1 204 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 NSD1Q96L73 2696 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-219ENST00000514743 TRGV2A0A075B6R0 118 aa5.03□□□□□ -1.6
PDLIM5-219ENST00000514743 LY6G6DO95868 133 aa5.03□□□□□ -1.6
PDLIM5-219ENST00000514743 BAHCC1Q9P281 2608 aa5.03□□□□□ -1.6
PDLIM5-219ENST00000514743 LINC00612Q8N6U2 182 aa5.03□□□□□ -1.6
PDLIM5-219ENST00000514743 ANK2Q01484 3957 aa5.03□□□□□ -1.6
PDLIM5-219ENST00000514743 NOTCH2Q04721 2471 aa5.02□□□□□ -1.61
PDLIM5-219ENST00000514743 Q6ZQT0 140 aa5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 IGLV4-60A0A075B6I1 120 aa5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 TRGV4A0A0C4DH28 118 aa5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 LINC00476Q8WZB0 136 aa5.01□□□□□ -1.61
PDLIM5-219ENST00000514743 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
PDLIM5-219ENST00000514743 HIVEP2P31629 2446 aa5□□□□□ -1.61
PDLIM5-219ENST00000514743 SND1-IT1Q9HBX3 110 aa5□□□□□ -1.61
PDLIM5-219ENST00000514743 A0A096LPF7 62 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 INAFM1C9JVW0 142 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 M0R2N4 97 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 DEFB130BP0DP73 79 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 DEFB130AP0DP74 79 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 CLPSL2Q6UWE3 100 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 Q8N9L7 120 aa4.99□□□□□ -1.61
PDLIM5-219ENST00000514743 IGHV3OR16-9A0A0B4J2B5 98 aa4.98□□□□□ -1.61
PDLIM5-219ENST00000514743 PLA2G1BP04054 148 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-219ENST00000514743 LINC00158P58513 81 aa4.98□□□□□ -1.61
PDLIM5-219ENST00000514743 HIVEP1P15822 2718 aa4.98□□□□□ -1.61
PDLIM5-219ENST00000514743 Q8N814 137 aa4.98□□□□□ -1.61
PDLIM5-219ENST00000514743 DNAH3Q8TD57 4116 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 B9D2Q9BPU9 175 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 LOC110117498A0A087WWA1 95 aa4.97□□□□□ -1.61
PDLIM5-219ENST00000514743 COX7B2Q8TF08 81 aa4.96□□□□□ -1.61
PDLIM5-219ENST00000514743 C9orf66Q5T8R8 295 aa4.96□□□□□ -1.62
PDLIM5-219ENST00000514743 C1orf134Q5TEV5 83 aa4.96□□□□□ -1.62
PDLIM5-219ENST00000514743 TEP1Q99973 2627 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-219ENST00000514743 DEFB4AO15263 64 aa4.96□□□□□ -1.62
PDLIM5-219ENST00000514743 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-219ENST00000514743 LINC00959A0A1B0GUT2 108 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 Q8NAQ8 132 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 LINC00167Q96N53 147 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 DEFB135Q30KP9 77 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 PRO0255Q9UI72 69 aa4.95□□□□□ -1.62
PDLIM5-219ENST00000514743 A0A1B0GUV1 79 aa4.94□□□□□ -1.62
PDLIM5-219ENST00000514743 NDUFB1O75438 58 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 CCL18P55774 89 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 IGHV4-28A0A0C4DH34 117 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 PDE6GP18545 87 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 ZCCHC13Q8WW36 166 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 CHCHD10Q8WYQ3 142 aaPredicted RBP4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 IGLV10-54A0A075B6I4 117 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
PDLIM5-219ENST00000514743 ATRQ13535 2644 aa4.92□□□□□ -1.62
PDLIM5-219ENST00000514743 ELOF1P60002 83 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-219ENST00000514743 SPINK7P58062 85 aa4.91□□□□□ -1.62
PDLIM5-219ENST00000514743 LCE6AA0A183 80 aa4.91□□□□□ -1.62
PDLIM5-219ENST00000514743 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
PDLIM5-219ENST00000514743 Q9BRP9 147 aa4.9□□□□□ -1.62
PDLIM5-219ENST00000514743 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 Q8IZM0 81 aa4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 PKD1L1Q8TDX9 2849 aa4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 ASB16-AS1Q495Z4 193 aa4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 MUC7Q8TAX7 377 aa4.9□□□□□ -1.63
PDLIM5-219ENST00000514743 IGHV4-30-4P0DP06 118 aa4.89□□□□□ -1.63
PDLIM5-219ENST00000514743 HTN3P15516 51 aa4.88□□□□□ -1.63
PDLIM5-219ENST00000514743 FBN1P35555 2871 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-219ENST00000514743 C10orf25Q5T742 122 aa4.88□□□□□ -1.63
PDLIM5-219ENST00000514743 ETDCA0A1B0GVM5 59 aa4.87□□□□□ -1.63
PDLIM5-219ENST00000514743 ANGP03950 147 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-219ENST00000514743 SPAG11BQ08648 103 aa4.87□□□□□ -1.63
PDLIM5-219ENST00000514743 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
PDLIM5-219ENST00000514743 ROMO1P60602 79 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms