RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NPC2P61916 151 aa5.96□□□□□ -1.46
HMGXB3-205ENST00000514469 S100A7L2Q5SY68 101 aa5.96□□□□□ -1.46
HMGXB3-205ENST00000514469 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
HMGXB3-205ENST00000514469 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
HMGXB3-205ENST00000514469 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
HMGXB3-205ENST00000514469 LITAFQ99732 161 aa5.95□□□□□ -1.46
HMGXB3-205ENST00000514469 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
HMGXB3-205ENST00000514469 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
HMGXB3-205ENST00000514469 ZNF73O43830 326 aaPredicted RBP5.94□□□□□ -1.46
HMGXB3-205ENST00000514469 C4orf48Q5BLP8 95 aa5.94□□□□□ -1.46
HMGXB3-205ENST00000514469 TIMM17BO60830 172 aa5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 SPINK1P00995 79 aa5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 MOBPQ13875 183 aa5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 JOSD1Q15040 202 aaPredicted RBP5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 PET117Q6UWS5 81 aa5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 SPANXCQ9NY87 97 aa5.93□□□□□ -1.46
HMGXB3-205ENST00000514469 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
HMGXB3-205ENST00000514469 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
HMGXB3-205ENST00000514469 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
HMGXB3-205ENST00000514469 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
HMGXB3-205ENST00000514469 C3orf79P0CE67 100 aa5.91□□□□□ -1.46
HMGXB3-205ENST00000514469 COA6Q5JTJ3 125 aaKnown RBP5.91□□□□□ -1.46
HMGXB3-205ENST00000514469 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
HMGXB3-205ENST00000514469 CBY1Q9Y3M2 126 aa5.91□□□□□ -1.46
HMGXB3-205ENST00000514469 ZNF815PA8K554 130 aa5.9□□□□□ -1.46
HMGXB3-205ENST00000514469 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
HMGXB3-205ENST00000514469 TTTY13Q9BZ97 58 aa5.9□□□□□ -1.46
HMGXB3-205ENST00000514469 C5orf52A6NGY3 159 aa5.89□□□□□ -1.47
HMGXB3-205ENST00000514469 Q8N377 158 aa5.89□□□□□ -1.47
HMGXB3-205ENST00000514469 SPANXDQ9BXN6 97 aa5.89□□□□□ -1.47
HMGXB3-205ENST00000514469 ST20-AS1Q8NBB2 130 aa5.88□□□□□ -1.47
HMGXB3-205ENST00000514469 HINT1P49773 126 aaPredicted RBP5.87□□□□□ -1.47
HMGXB3-205ENST00000514469 KRTDAPP60985 99 aa5.87□□□□□ -1.47
HMGXB3-205ENST00000514469 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
HMGXB3-205ENST00000514469 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
HMGXB3-205ENST00000514469 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
HMGXB3-205ENST00000514469 SPRR1BP22528 89 aa5.86□□□□□ -1.47
HMGXB3-205ENST00000514469 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
HMGXB3-205ENST00000514469 C20orf202A1L168 122 aa5.85□□□□□ -1.47
HMGXB3-205ENST00000514469 SLC25A20O43772 301 aa5.85□□□□□ -1.47
HMGXB3-205ENST00000514469 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
HMGXB3-205ENST00000514469 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
HMGXB3-205ENST00000514469 LINC00518Q8N0U6 118 aa5.85□□□□□ -1.47
HMGXB3-205ENST00000514469 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
HMGXB3-205ENST00000514469 COX7BP24311 80 aa5.83□□□□□ -1.48
HMGXB3-205ENST00000514469 C6orf99Q4VX62 202 aa5.83□□□□□ -1.48
HMGXB3-205ENST00000514469 SLC25A34Q6PIV7 304 aa5.83□□□□□ -1.48
HMGXB3-205ENST00000514469 SCGB1D4Q6XE38 83 aa5.83□□□□□ -1.48
HMGXB3-205ENST00000514469 TRBV7-6A0A0J9YX20 115 aa5.82□□□□□ -1.48
HMGXB3-205ENST00000514469 IFITM1P13164 125 aa5.82□□□□□ -1.48
HMGXB3-205ENST00000514469 ATOH7Q8N100 152 aa5.82□□□□□ -1.48
HMGXB3-205ENST00000514469 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
HMGXB3-205ENST00000514469 AKR1D1P51857 326 aa5.81□□□□□ -1.48
HMGXB3-205ENST00000514469 Q6ZVH6 145 aa5.81□□□□□ -1.48
HMGXB3-205ENST00000514469 XP32Q5T750 250 aa5.8□□□□□ -1.48
HMGXB3-205ENST00000514469 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
HMGXB3-205ENST00000514469 LIMD2Q9BT23 127 aa5.8□□□□□ -1.48
HMGXB3-205ENST00000514469 LAMTOR3Q9UHA4 124 aa5.8□□□□□ -1.48
HMGXB3-205ENST00000514469 A0A1B0GWB2 263 aa5.79□□□□□ -1.48
HMGXB3-205ENST00000514469 SEC61BP60468 96 aaKnown RBP5.79□□□□□ -1.48
HMGXB3-205ENST00000514469 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
HMGXB3-205ENST00000514469 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
HMGXB3-205ENST00000514469 IGLV5-48A0A075B6I7 105 aa5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 TEX49A0A1B0GTD5 131 aa5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 A6NDN8 102 aa5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 Q1RN00 199 aa5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
HMGXB3-205ENST00000514469 CD164Q04900 197 aa5.76□□□□□ -1.49
HMGXB3-205ENST00000514469 TAL2Q16559 108 aa5.76□□□□□ -1.49
HMGXB3-205ENST00000514469 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
HMGXB3-205ENST00000514469 HIST3H2BBQ8N257 126 aa5.76□□□□□ -1.49
HMGXB3-205ENST00000514469 DEFB105AQ8NG35 78 aa5.76□□□□□ -1.49
HMGXB3-205ENST00000514469 TRAV13-2A0A0B4J235 113 aa5.75□□□□□ -1.49
HMGXB3-205ENST00000514469 A4D1N5 150 aa5.75□□□□□ -1.49
HMGXB3-205ENST00000514469 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
HMGXB3-205ENST00000514469 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
HMGXB3-205ENST00000514469 PRO1933Q9H354 126 aa5.75□□□□□ -1.49
HMGXB3-205ENST00000514469 SMIM11BQ8TCY0 68 aa5.74□□□□□ -1.49
HMGXB3-205ENST00000514469 Q5XG85 94 aa5.73□□□□□ -1.49
HMGXB3-205ENST00000514469 NHP2Q9NX24 153 aaKnown RBP5.73□□□□□ -1.49
HMGXB3-205ENST00000514469 H7C2G1 150 aa5.72□□□□□ -1.49
HMGXB3-205ENST00000514469 S100A2P29034 98 aa5.72□□□□□ -1.49
HMGXB3-205ENST00000514469 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
HMGXB3-205ENST00000514469 A0A0G2JQZ4 141 aa5.69□□□□□ -1.5
HMGXB3-205ENST00000514469 C9orf92A6NGG3 77 aa5.69□□□□□ -1.5
HMGXB3-205ENST00000514469 S100A1P23297 94 aa5.68□□□□□ -1.5
HMGXB3-205ENST00000514469 C1orf195Q5TG92 126 aa5.68□□□□□ -1.5
HMGXB3-205ENST00000514469 LINC00575Q6W349 94 aa5.68□□□□□ -1.5
HMGXB3-205ENST00000514469 S100A6P06703 90 aa5.67□□□□□ -1.5
HMGXB3-205ENST00000514469 VAMP3Q15836 100 aa5.67□□□□□ -1.5
HMGXB3-205ENST00000514469 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
HMGXB3-205ENST00000514469 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
HMGXB3-205ENST00000514469 Q6ZQY7 126 aa5.66□□□□□ -1.5
HMGXB3-205ENST00000514469 F8WEM9 126 aa5.65□□□□□ -1.5
HMGXB3-205ENST00000514469 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
HMGXB3-205ENST00000514469 IGLV8-61A0A075B6I0 122 aa5.64□□□□□ -1.51
HMGXB3-205ENST00000514469 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
HMGXB3-205ENST00000514469 COX8AP10176 69 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms