RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 IGLV5-37A0A075B6J1 123 aa11.26□□□□□ -0.61
ARHGEF28-212ENST00000513042 Q8N1X5 172 aa11.25□□□□□ -0.61
ARHGEF28-212ENST00000513042 KLKP1Q107X0 134 aa11.24□□□□□ -0.61
ARHGEF28-212ENST00000513042 DOPEY1Q5JWR5 2465 aa11.23□□□□□ -0.61
ARHGEF28-212ENST00000513042 H7BZZ5 65 aa11.23□□□□□ -0.61
ARHGEF28-212ENST00000513042 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
ARHGEF28-212ENST00000513042 LINC00336Q6ZUF6 198 aa11.23□□□□□ -0.61
ARHGEF28-212ENST00000513042 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
ARHGEF28-212ENST00000513042 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
ARHGEF28-212ENST00000513042 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
ARHGEF28-212ENST00000513042 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
ARHGEF28-212ENST00000513042 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
ARHGEF28-212ENST00000513042 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
ARHGEF28-212ENST00000513042 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
ARHGEF28-212ENST00000513042 A0A1W2PNM2 257 aa11.17□□□□□ -0.62
ARHGEF28-212ENST00000513042 MYO9AB2RTY4 2548 aa11.16□□□□□ -0.62
ARHGEF28-212ENST00000513042 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
ARHGEF28-212ENST00000513042 JMJD1CQ15652 2540 aa11.15□□□□□ -0.63
ARHGEF28-212ENST00000513042 A0A096LNT2 108 aa11.14□□□□□ -0.63
ARHGEF28-212ENST00000513042 ABCA12Q86UK0 2595 aa11.14□□□□□ -0.63
ARHGEF28-212ENST00000513042 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
ARHGEF28-212ENST00000513042 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
ARHGEF28-212ENST00000513042 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
ARHGEF28-212ENST00000513042 KTN1-AS1Q86SY8 53 aa11.11□□□□□ -0.63
ARHGEF28-212ENST00000513042 CDC42SE1Q9NRR8 79 aa11.11□□□□□ -0.63
ARHGEF28-212ENST00000513042 ZNF575Q86XF7 245 aa11.07□□□□□ -0.64
ARHGEF28-212ENST00000513042 LCA10Q71F78 164 aa11.05□□□□□ -0.64
ARHGEF28-212ENST00000513042 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
ARHGEF28-212ENST00000513042 CD164Q04900 197 aa11.04□□□□□ -0.64
ARHGEF28-212ENST00000513042 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
ARHGEF28-212ENST00000513042 CENPFP49454 3210 aa10.99□□□□□ -0.65
ARHGEF28-212ENST00000513042 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
ARHGEF28-212ENST00000513042 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
ARHGEF28-212ENST00000513042 ZFYVE26Q68DK2 2539 aa10.97□□□□□ -0.65
ARHGEF28-212ENST00000513042 KRTAP1-3Q8IUG1 177 aa10.95□□□□□ -0.66
ARHGEF28-212ENST00000513042 USP9XQ93008 2570 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF28-212ENST00000513042 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
ARHGEF28-212ENST00000513042 TNP2Q05952 138 aa10.93□□□□□ -0.66
ARHGEF28-212ENST00000513042 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
ARHGEF28-212ENST00000513042 OCR1Q9BZK8 76 aa10.9□□□□□ -0.66
ARHGEF28-212ENST00000513042 Q6ZSA8 131 aa10.9□□□□□ -0.66
ARHGEF28-212ENST00000513042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF28-212ENST00000513042 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
ARHGEF28-212ENST00000513042 KRTAP1-1Q07627 177 aa10.87□□□□□ -0.67
ARHGEF28-212ENST00000513042 SETD2Q9BYW2 2564 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF28-212ENST00000513042 GOLGB1Q14789 3259 aaKnown RBP10.86□□□□□ -0.67
ARHGEF28-212ENST00000513042 HRES1P13985 223 aa10.85□□□□□ -0.67
ARHGEF28-212ENST00000513042 ANKRD11Q6UB99 2663 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF28-212ENST00000513042 Q1T7F1 81 aa10.85□□□□□ -0.67
ARHGEF28-212ENST00000513042 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
ARHGEF28-212ENST00000513042 LUZP6Q538Z0 58 aa10.82□□□□□ -0.68
ARHGEF28-212ENST00000513042 CAMK2N1Q7Z7J9 78 aa10.82□□□□□ -0.68
ARHGEF28-212ENST00000513042 A0A1B0GU33 70 aa10.81□□□□□ -0.68
ARHGEF28-212ENST00000513042 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
ARHGEF28-212ENST00000513042 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
ARHGEF28-212ENST00000513042 M0R2T5 61 aa10.78□□□□□ -0.68
ARHGEF28-212ENST00000513042 POLQO75417 2590 aa10.74□□□□□ -0.69
ARHGEF28-212ENST00000513042 Q8N9P0 234 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF28-212ENST00000513042 CEP295Q9C0D2 2601 aa10.72□□□□□ -0.69
ARHGEF28-212ENST00000513042 Q75L30 129 aa10.72□□□□□ -0.69
ARHGEF28-212ENST00000513042 Q8NDZ9 215 aa10.72□□□□□ -0.69
ARHGEF28-212ENST00000513042 CR1P17927 2039 aa10.72□□□□□ -0.69
ARHGEF28-212ENST00000513042 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF28-212ENST00000513042 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
ARHGEF28-212ENST00000513042 S4R3F8 94 aa10.71□□□□□ -0.69
ARHGEF28-212ENST00000513042 LINC00483Q53H64 154 aa10.71□□□□□ -0.7
ARHGEF28-212ENST00000513042 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
ARHGEF28-212ENST00000513042 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
ARHGEF28-212ENST00000513042 MTORP42345 2549 aa10.66□□□□□ -0.7
ARHGEF28-212ENST00000513042 CYSTM1Q9H1C7 97 aa10.66□□□□□ -0.7
ARHGEF28-212ENST00000513042 ACANP16112 2415 aa10.65□□□□□ -0.7
ARHGEF28-212ENST00000513042 WIPF1O43516 503 aa10.63□□□□□ -0.71
ARHGEF28-212ENST00000513042 SPTBN4Q9H254 2564 aa10.63□□□□□ -0.71
ARHGEF28-212ENST00000513042 Q5XG85 94 aa10.62□□□□□ -0.71
ARHGEF28-212ENST00000513042 CHD8Q9HCK8 2581 aa10.62□□□□□ -0.71
ARHGEF28-212ENST00000513042 LINC01558Q9Y6Z2 57 aa10.61□□□□□ -0.71
ARHGEF28-212ENST00000513042 Q5W150 140 aa10.61□□□□□ -0.71
ARHGEF28-212ENST00000513042 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
ARHGEF28-212ENST00000513042 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
ARHGEF28-212ENST00000513042 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
ARHGEF28-212ENST00000513042 F8P00451 2351 aa10.56□□□□□ -0.72
ARHGEF28-212ENST00000513042 SPINK7P58062 85 aa10.56□□□□□ -0.72
ARHGEF28-212ENST00000513042 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF28-212ENST00000513042 Q5VV11 94 aa10.53□□□□□ -0.72
ARHGEF28-212ENST00000513042 SPRR1AP35321 89 aa10.51□□□□□ -0.73
ARHGEF28-212ENST00000513042 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
ARHGEF28-212ENST00000513042 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
ARHGEF28-212ENST00000513042 DNAH12Q6ZR08 3092 aa10.48□□□□□ -0.73
ARHGEF28-212ENST00000513042 R4GN34 69 aa10.45□□□□□ -0.74
ARHGEF28-212ENST00000513042 KRTAP1-5Q9BYS1 174 aa10.45□□□□□ -0.74
ARHGEF28-212ENST00000513042 H3BS24 57 aa10.42□□□□□ -0.74
ARHGEF28-212ENST00000513042 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
ARHGEF28-212ENST00000513042 Q5VSD8 79 aa10.4□□□□□ -0.74
ARHGEF28-212ENST00000513042 SPRR1BP22528 89 aa10.38□□□□□ -0.75
ARHGEF28-212ENST00000513042 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
ARHGEF28-212ENST00000513042 KRTAP10-2P60368 255 aa10.35□□□□□ -0.75
ARHGEF28-212ENST00000513042 ROMO1P60602 79 aa10.32□□□□□ -0.76
ARHGEF28-212ENST00000513042 M0QZ58 72 aa10.32□□□□□ -0.76
ARHGEF28-212ENST00000513042 OXTP01178 125 aa10.32□□□□□ -0.76
ARHGEF28-212ENST00000513042 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms