RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.11
PVT1-202ENST00000512617 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.11
PVT1-202ENST00000512617 CEBPZOSA8MTT3 80 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 LEPROTL1O95214 131 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 CCL3L1P16619 93 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 PLGLAQ15195 96 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 DEFB121Q5J5C9 76 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 C10orf55Q5SWW7 151 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 Q86TA4 180 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 R4GMQ9 66 aa1.84□□□□□ -2.11
PVT1-202ENST00000512617 ROS1P08922 2347 aa1.84□□□□□ -2.12
PVT1-202ENST00000512617 ARFGEF3Q5TH69 2177 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 ZANQ9Y493 2812 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 CSPG4Q6UVK1 2322 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 FAM223BA6NKX1 122 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 CPSF4LA6NMK7 179 aaKnown RBP1.83□□□□□ -2.12
PVT1-202ENST00000512617 H3BRN7 92 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 FXYD6P3P58550 94 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 AMELXQ99217 191 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 TMEM14CQ9P0S9 112 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 HIVEP2P31629 2446 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 SVEP1Q4LDE5 3571 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 PLCE1Q9P212 2302 aa1.83□□□□□ -2.12
PVT1-202ENST00000512617 ABCA1O95477 2261 aa1.82□□□□□ -2.12
PVT1-202ENST00000512617 IGKV2-24A0A0C4DH68 120 aa1.82□□□□□ -2.12
PVT1-202ENST00000512617 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
PVT1-202ENST00000512617 LYNX1P0DP58 116 aa1.82□□□□□ -2.12
PVT1-202ENST00000512617 ANK2Q01484 3957 aa1.82□□□□□ -2.12
PVT1-202ENST00000512617 ALPK2Q86TB3 2170 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 RTTNQ86VV8 2226 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 TRGV4A0A0C4DH28 118 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 IGKV3D-7A0A0C4DH55 119 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 IGKV3OR2-268A0A0C4DH90 116 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 D6R8Y8 96 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 F8VRH5 84 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 IGKV1-17P01599 117 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 KRTAP1-4P0C5Y4 121 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 COX8AP10176 69 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 RNASE3P12724 160 aaKnown RBP1.81□□□□□ -2.12
PVT1-202ENST00000512617 GCHFRP30047 84 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 LINC00315P59091 139 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 RPL37AP61513 92 aaKnown RBP1.81□□□□□ -2.12
PVT1-202ENST00000512617 SNRPGP62308 76 aaKnown RBP1.81□□□□□ -2.12
PVT1-202ENST00000512617 PRR9Q5T870 116 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 MUSTN1Q8IVN3 82 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 V9GYV3 84 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 SONP18583 2426 aaKnown RBP1.81□□□□□ -2.12
PVT1-202ENST00000512617 NACAE9PAV3 2078 aa1.81□□□□□ -2.12
PVT1-202ENST00000512617 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
PVT1-202ENST00000512617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.8□□□□□ -2.122e-6■■■■■ 57
PVT1-202ENST00000512617 TLN2Q9Y4G6 2542 aa1.8□□□□□ -2.12
PVT1-202ENST00000512617 KRTAP13-2Q52LG2 175 aa1.8□□□□□ -2.12
PVT1-202ENST00000512617 KIAA2026Q5HYC2 2103 aa1.8□□□□□ -2.12
PVT1-202ENST00000512617 Q6JHZ5 121 aa1.8□□□□□ -2.12
PVT1-202ENST00000512617 DEFB108BQ8NET1 73 aa1.8□□□□□ -2.12
PVT1-202ENST00000512617 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 IGKV2-40A0A087WW87 121 aaPredicted RBP1.79□□□□□ -2.12
PVT1-202ENST00000512617 SNRPGP15A8MWD9 76 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 M0R3E3 92 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 IGKV2D-40P01614 121 aaPredicted RBP1.79□□□□□ -2.12
PVT1-202ENST00000512617 CCL18P55774 89 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 LINC01590Q5TEZ4 76 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 LINC00322Q6ZN03 302 aaPredicted RBP1.79□□□□□ -2.12
PVT1-202ENST00000512617 BAGE2Q86Y30 109 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 HILPDAQ9Y5L2 63 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 LINC01558Q9Y6Z2 57 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 ARHGAP32A7KAX9 2087 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 HEATR1Q9H583 2144 aaKnown RBP1.79□□□□□ -2.12
PVT1-202ENST00000512617 NBEAL1Q6ZS30 2694 aa1.79□□□□□ -2.12
PVT1-202ENST00000512617 MAP1AP78559 2803 aaPredicted RBP1.78□□□□□ -2.12
PVT1-202ENST00000512617 ATRQ13535 2644 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 TRBV6-5A0A0K0K1A5 114 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 CTXND1A0A1B0GTU2 59 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 H3BVH4 76 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 M0R135 149 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
PVT1-202ENST00000512617 RPS27P42677 84 aaKnown RBP1.78□□□□□ -2.12
PVT1-202ENST00000512617 FXYD3Q14802 87 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 ATP5EP2Q5VTU8 51 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 COA5Q86WW8 74 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 TXNDC17Q9BRA2 123 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 COL6A5A8TX70 2615 aa1.78□□□□□ -2.12
PVT1-202ENST00000512617 STAB1Q9NY15 2570 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 NBDYA0A0U1RRE5 68 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 IGKV2-29A2NJV5 120 aaPredicted RBP1.77□□□□□ -2.13
PVT1-202ENST00000512617 J3QRE1 110 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 UQCR11O14957 56 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 INE1O15225 51 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 GAS8-AS1O95177 125 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 C3orf79P0CE67 100 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 FXYD4P59646 89 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 BAGE3Q86Y29 109 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 C5orf56Q8N8D9 126 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
PVT1-202ENST00000512617 CMC2Q9NRP2 79 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms