RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 TRAV23DV6A0A075B6W5 121 aa12.49□□□□□ -0.41
UBE2D3-229ENST00000510129 S100A2P29034 98 aa12.49□□□□□ -0.41
UBE2D3-229ENST00000510129 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
UBE2D3-229ENST00000510129 Q6ZRX8 168 aa12.49□□□□□ -0.41
UBE2D3-229ENST00000510129 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
UBE2D3-229ENST00000510129 TSPAN13O95857 204 aa12.48□□□□□ -0.41
UBE2D3-229ENST00000510129 HINT1P49773 126 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-229ENST00000510129 PRR4Q16378 134 aa12.47□□□□□ -0.41
UBE2D3-229ENST00000510129 LINC00518Q8N0U6 118 aa12.47□□□□□ -0.41
UBE2D3-229ENST00000510129 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-229ENST00000510129 EIF4EBP3O60516 100 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-229ENST00000510129 S100A6P06703 90 aa12.45□□□□□ -0.42
UBE2D3-229ENST00000510129 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
UBE2D3-229ENST00000510129 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 Q6ZVH6 145 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 HIST3H2BBQ8N257 126 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 SPANXDQ9BXN6 97 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 TTTY13Q9BZ97 58 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 PPDPFQ9H3Y8 114 aa12.44□□□□□ -0.42
UBE2D3-229ENST00000510129 IFITM1P13164 125 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 LINC00483Q53H64 154 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 ANKRD39Q53RE8 183 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 OR13C6PQ8NH95 151 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 HIST1H2BLQ99880 126 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
UBE2D3-229ENST00000510129 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
UBE2D3-229ENST00000510129 C3orf22Q8N5N4 141 aa12.4□□□□□ -0.42
UBE2D3-229ENST00000510129 HSBP1L1C9JCN9 74 aa12.39□□□□□ -0.43
UBE2D3-229ENST00000510129 Q9BRP9 147 aa12.39□□□□□ -0.43
UBE2D3-229ENST00000510129 GAGE2AQ6NT46 116 aa12.38□□□□□ -0.43
UBE2D3-229ENST00000510129 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
UBE2D3-229ENST00000510129 DHRS4-AS1Q9P1J3 65 aa12.35□□□□□ -0.43
UBE2D3-229ENST00000510129 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
UBE2D3-229ENST00000510129 LRP2P98164 4655 aa12.34□□□□□ -0.43
UBE2D3-229ENST00000510129 SSBP3-AS1Q7Z2R9 100 aa12.32□□□□□ -0.44
UBE2D3-229ENST00000510129 Q8NBF4 154 aa12.32□□□□□ -0.44
UBE2D3-229ENST00000510129 SPINK1P00995 79 aa12.3□□□□□ -0.44
UBE2D3-229ENST00000510129 SLC25A34Q6PIV7 304 aa12.3□□□□□ -0.44
UBE2D3-229ENST00000510129 TRBV7-6A0A0J9YX20 115 aa12.29□□□□□ -0.44
UBE2D3-229ENST00000510129 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
UBE2D3-229ENST00000510129 IGLV9-49A0A0B4J1Y8 123 aa12.28□□□□□ -0.44
UBE2D3-229ENST00000510129 COX7BP24311 80 aa12.28□□□□□ -0.44
UBE2D3-229ENST00000510129 ELOF1P60002 83 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-229ENST00000510129 C6orf99Q4VX62 202 aa12.28□□□□□ -0.44
UBE2D3-229ENST00000510129 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.45
UBE2D3-229ENST00000510129 A6NDN8 102 aa12.27□□□□□ -0.45
UBE2D3-229ENST00000510129 MOBPQ13875 183 aa12.27□□□□□ -0.45
UBE2D3-229ENST00000510129 SCGB1D1O95968 90 aa12.25□□□□□ -0.45
UBE2D3-229ENST00000510129 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-229ENST00000510129 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
UBE2D3-229ENST00000510129 A0A1B0GWB2 263 aa12.24□□□□□ -0.45
UBE2D3-229ENST00000510129 A4D1N5 150 aa12.23□□□□□ -0.45
UBE2D3-229ENST00000510129 SPRR1BP22528 89 aa12.23□□□□□ -0.45
UBE2D3-229ENST00000510129 SMCPP49901 116 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-229ENST00000510129 FP248Q71RG6 208 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-229ENST00000510129 IGLV7-46A0A075B6I9 117 aa12.22□□□□□ -0.45
UBE2D3-229ENST00000510129 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
UBE2D3-229ENST00000510129 ST20-AS1Q8NBB2 130 aa12.22□□□□□ -0.45
UBE2D3-229ENST00000510129 TPRXLQ17RH7 258 aa12.21□□□□□ -0.45
UBE2D3-229ENST00000510129 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
UBE2D3-229ENST00000510129 NHP2Q9NX24 153 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-229ENST00000510129 TAL2Q16559 108 aa12.16□□□□□ -0.46
UBE2D3-229ENST00000510129 TEX49A0A1B0GTD5 131 aa12.15□□□□□ -0.46
UBE2D3-229ENST00000510129 VAMP3Q15836 100 aa12.15□□□□□ -0.46
UBE2D3-229ENST00000510129 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
UBE2D3-229ENST00000510129 SLC25A20O43772 301 aa12.14□□□□□ -0.47
UBE2D3-229ENST00000510129 COX8AP10176 69 aa12.14□□□□□ -0.47
UBE2D3-229ENST00000510129 DLEU1O43261 78 aa12.13□□□□□ -0.47
UBE2D3-229ENST00000510129 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
UBE2D3-229ENST00000510129 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
UBE2D3-229ENST00000510129 LPAP08519 4548 aa12.11□□□□□ -0.47
UBE2D3-229ENST00000510129 Q8N377 158 aa12.09□□□□□ -0.47
UBE2D3-229ENST00000510129 DEFB105AQ8NG35 78 aa12.09□□□□□ -0.47
UBE2D3-229ENST00000510129 RNF213Q63HN8 5207 aa12.09□□□□□ -0.47
UBE2D3-229ENST00000510129 IGLV5-48A0A075B6I7 105 aa12.08□□□□□ -0.48
UBE2D3-229ENST00000510129 LIMD2Q9BT23 127 aa12.07□□□□□ -0.48
UBE2D3-229ENST00000510129 VAMP8Q9BV40 100 aa12.05□□□□□ -0.48
UBE2D3-229ENST00000510129 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
UBE2D3-229ENST00000510129 CD164Q04900 197 aa12.04□□□□□ -0.48
UBE2D3-229ENST00000510129 Q1RN00 199 aa12.04□□□□□ -0.48
UBE2D3-229ENST00000510129 HIGD1BQ9P298 99 aa12.04□□□□□ -0.48
UBE2D3-229ENST00000510129 LCE2BO14633 110 aa12.03□□□□□ -0.48
UBE2D3-229ENST00000510129 SPATA45Q537H7 98 aa12.03□□□□□ -0.48
UBE2D3-229ENST00000510129 PAM16Q9Y3D7 125 aa12.03□□□□□ -0.48
UBE2D3-229ENST00000510129 BVES-AS1Q5T3Y7 98 aa12.02□□□□□ -0.49
UBE2D3-229ENST00000510129 A0A0U1RQV1 116 aa12.01□□□□□ -0.49
UBE2D3-229ENST00000510129 LINC00575Q6W349 94 aa12.01□□□□□ -0.49
UBE2D3-229ENST00000510129 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
UBE2D3-229ENST00000510129 LINC01547P58512 204 aaPredicted RBP12□□□□□ -0.49
UBE2D3-229ENST00000510129 KRTAP13-3Q3SY46 172 aa12□□□□□ -0.49
UBE2D3-229ENST00000510129 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
UBE2D3-229ENST00000510129 hADV29S1A0JD25 119 aa11.98□□□□□ -0.49
UBE2D3-229ENST00000510129 H7C2G1 150 aa11.97□□□□□ -0.49
UBE2D3-229ENST00000510129 F8WEM9 126 aa11.96□□□□□ -0.49
UBE2D3-229ENST00000510129 RAB37Q96AX2 223 aa11.96□□□□□ -0.49
UBE2D3-229ENST00000510129 C12orf57Q99622 126 aa11.96□□□□□ -0.49
UBE2D3-229ENST00000510129 HRCT1Q6UXD1 115 aa11.95□□□□□ -0.5
UBE2D3-229ENST00000510129 SNCGO76070 127 aa11.94□□□□□ -0.5
UBE2D3-229ENST00000510129 PPDPFLQ8WWR9 84 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms