RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 PRH1P02810 166 aa1.13□□□□□ -2.23
CAST-229ENST00000510098 NREPQ16612 68 aa1.13□□□□□ -2.23
CAST-229ENST00000510098 DEFB123Q8N688 67 aa1.13□□□□□ -2.23
CAST-229ENST00000510098 FAM103A1Q9BTL3 118 aaKnown RBP1.13□□□□□ -2.23
CAST-229ENST00000510098 CMC2Q9NRP2 79 aa1.13□□□□□ -2.23
CAST-229ENST00000510098 PAPPAQ13219 1627 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 TJP1Q07157 1748 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 FMN2Q9NZ56 1722 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 TOGARAM1Q9Y4F4 1720 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 BCORQ6W2J9 1755 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 SPTY2D1-AS1A0A0U1RR47 76 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 CPSF4LA6NMK7 179 aaKnown RBP1.12□□□□□ -2.23
CAST-229ENST00000510098 USMG5Q96IX5 58 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 HILPDAQ9Y5L2 63 aa1.12□□□□□ -2.23
CAST-229ENST00000510098 TNRC6CQ9HCJ0 1690 aaKnown RBP1.11□□□□□ -2.23
CAST-229ENST00000510098 LY75O60449 1722 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 LCE6AA0A183 80 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 ATXN8Q156A1 80 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 LINC01590Q5TEZ4 76 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 TTTY10Q9BZA0 68 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 CRIPTQ9P021 101 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 GNG13Q9P2W3 67 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 ALS2Q96Q42 1657 aa1.11□□□□□ -2.23
CAST-229ENST00000510098 DDX60LQ5H9U9 1706 aaKnown RBP1.1□□□□□ -2.23
CAST-229ENST00000510098 UBR3Q6ZT12 1888 aa1.1□□□□□ -2.23
CAST-229ENST00000510098 COL14A1Q05707 1796 aaKnown RBP1.1□□□□□ -2.23
CAST-229ENST00000510098 NHSQ6T4R5 1651 aa1.1□□□□□ -2.23
CAST-229ENST00000510098 Q8IZM0 81 aa1.1□□□□□ -2.23
CAST-229ENST00000510098 ZNF831Q5JPB2 1677 aa1.09□□□□□ -2.23
CAST-229ENST00000510098 NRAPQ86VF7 1730 aa1.09□□□□□ -2.24
CAST-229ENST00000510098 C3orf79P0CE67 100 aa1.09□□□□□ -2.24
CAST-229ENST00000510098 SERF2P84101 59 aa1.09□□□□□ -2.24
CAST-229ENST00000510098 QSER1Q2KHR3 1735 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 DOT1LQ8TEK3 1739 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 URB1O60287 2271 aaKnown RBP1.08□□□□□ -2.24
CAST-229ENST00000510098 H3BSH0 61 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 I3L3M4 83 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 K7EQZ3 153 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 ARHGAP5-AS1Q96IT6 56 aa1.08□□□□□ -2.24
CAST-229ENST00000510098 RICTORQ6R327 1708 aa1.07□□□□□ -2.24
CAST-229ENST00000510098 RPS27P42677 84 aaKnown RBP1.07□□□□□ -2.24
CAST-229ENST00000510098 SMIM27A0A1W2PRY6 76 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 NDUFA4O00483 81 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 SPINK4O60575 86 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 STATHP02808 62 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 IAPPP10997 89 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 COX14Q96I36 57 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 Q9Y3F1 56 aa1.05□□□□□ -2.24
CAST-229ENST00000510098 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 TSC2P49815 1807 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 COX6B1P14854 86 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 CD52P31358 61 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 PRB3Q04118 309 aaPredicted RBP1.04□□□□□ -2.24
CAST-229ENST00000510098 TFF3Q07654 80 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 TMEM167BQ9NRX6 74 aa1.04□□□□□ -2.24
CAST-229ENST00000510098 H0YGG7 62 aa1.03□□□□□ -2.24
CAST-229ENST00000510098 Q5VSD8 79 aa1.02□□□□□ -2.25
CAST-229ENST00000510098 ENHOQ6UWT2 76 aa1.02□□□□□ -2.25
CAST-229ENST00000510098 MRPL34Q9BQ48 92 aaKnown RBP1.02□□□□□ -2.25
CAST-229ENST00000510098 CACNA1EQ15878 2313 aa1.02□□□□□ -2.25
CAST-229ENST00000510098 PLCE1Q9P212 2302 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 LINC01546A6NGU7 62 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 LINC01549A6NIU2 74 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 TIMM8BQ9Y5J9 83 aaPredicted RBP1.01□□□□□ -2.25
CAST-229ENST00000510098 BPTFQ12830 3046 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 DOPEY2Q9Y3R5 2298 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 CACNA1HO95180 2353 aa1.01□□□□□ -2.25
CAST-229ENST00000510098 K7EMI3 77 aa1□□□□□ -2.25
CAST-229ENST00000510098 FCER1GP30273 86 aa1□□□□□ -2.25
CAST-229ENST00000510098 DEFB110Q30KQ9 67 aa1□□□□□ -2.25
CAST-229ENST00000510098 UBL5Q9BZL1 73 aa1□□□□□ -2.25
CAST-229ENST00000510098 PLNP26678 52 aa0.99□□□□□ -2.25
CAST-229ENST00000510098 PRCDQ00LT1 54 aa0.99□□□□□ -2.25
CAST-229ENST00000510098 COX6B2Q6YFQ2 88 aa0.99□□□□□ -2.25
CAST-229ENST00000510098 C2CD3Q4AC94 2353 aa0.99□□□□□ -2.25
CAST-229ENST00000510098 ALMS1Q8TCU4 4167 aa0.98□□□□□ -2.25
CAST-229ENST00000510098 SPTBN2O15020 2390 aa0.98□□□□□ -2.25
CAST-229ENST00000510098 NDUFA3O95167 84 aa0.98□□□□□ -2.25
CAST-229ENST00000510098 CRIP1P50238 77 aa0.98□□□□□ -2.25
CAST-229ENST00000510098 PIEZO2Q9H5I5 2752 aa0.98□□□□□ -2.25
CAST-229ENST00000510098 DEFB108AA8MXU0 73 aa0.97□□□□□ -2.25
CAST-229ENST00000510098 SPRR1AP35321 89 aa0.97□□□□□ -2.25
CAST-229ENST00000510098 RPL39P5Q59GN2 51 aa0.97□□□□□ -2.25
CAST-229ENST00000510098 TMEM167AQ8TBQ9 72 aa0.97□□□□□ -2.25
CAST-229ENST00000510098 MEGF8Q7Z7M0 2845 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 MRPL33O75394 65 aaKnown RBP0.96□□□□□ -2.26
CAST-229ENST00000510098 WT1-ASQ06250 92 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 SMIM2Q9BVW6 85 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 KCNQ1DNQ9H478 68 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 TTC28Q96AY4 2481 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 USF3Q68DE3 2245 aa0.96□□□□□ -2.26
CAST-229ENST00000510098 PTPRZ1P23471 2315 aaPredicted RBP0.96□□□□□ -2.26
CAST-229ENST00000510098 IGIPA6NJ69 53 aa0.95□□□□□ -2.26
CAST-229ENST00000510098 SPRR1BP22528 89 aa0.95□□□□□ -2.26
CAST-229ENST00000510098 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.95□□□□□ -2.26
CAST-229ENST00000510098 PTPRQQ9UMZ3 2332 aa0.95□□□□□ -2.26
CAST-229ENST00000510098 DEFB131BA0A096LNP1 70 aa0.94□□□□□ -2.26
CAST-229ENST00000510098 POLR2KP53803 58 aaKnown RBP0.94□□□□□ -2.26
CAST-229ENST00000510098 LEAP2Q969E1 77 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 261 ms