RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 LRRC9Q6ZRR7 1453 aa-0.6□□□□□ -2.5
GYPB-210ENST00000508841 MON2Q7Z3U7 1717 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 UBR1Q8IWV7 1749 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 LRRIQ1Q96JM4 1722 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 EIF4G3O43432 1585 aaKnown RBP-0.6□□□□□ -2.51
GYPB-210ENST00000508841 SSSCA1O60232 199 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 BCE1O60756 84 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
GYPB-210ENST00000508841 CLPSL2Q6UWE3 100 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 DUOX2Q9NRD8 1548 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 ABCA6Q8N139 1617 aa-0.6□□□□□ -2.51
GYPB-210ENST00000508841 ERVK-7P63135 1459 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 MLH3Q9UHC1 1453 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 PDCD11Q14690 1871 aaKnown RBP-0.61□□□□□ -2.51
GYPB-210ENST00000508841 NWD1Q149M9 1564 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 SHPRHQ149N8 1683 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 ALS2Q96Q42 1657 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 STATHP02808 62 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 SPRR1BP22528 89 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 PRLHP81277 87 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 RPS27LQ71UM5 84 aaKnown RBP-0.61□□□□□ -2.51
GYPB-210ENST00000508841 ARL11Q969Q4 196 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 NAA60Q9H7X0 242 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 DDX60Q8IY21 1712 aaKnown RBP-0.61□□□□□ -2.51
GYPB-210ENST00000508841 NALCNQ8IZF0 1738 aa-0.61□□□□□ -2.51
GYPB-210ENST00000508841 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
GYPB-210ENST00000508841 PREX1Q8TCU6 1659 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 RRBP1Q9P2E9 1410 aaKnown RBP-0.62□□□□□ -2.51
GYPB-210ENST00000508841 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 CC2D2AQ9P2K1 1620 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 A0A087WVE0 104 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 F8WEM9 126 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 H3BSH0 61 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 SPRR1AP35321 89 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 UBE2D3P61077 147 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 DCDP81605 110 aaKnown RBP-0.62□□□□□ -2.51
GYPB-210ENST00000508841 TP53AIP1Q9HCN2 124 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 KIF20BQ96Q89 1820 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 DIP2AQ14689 1571 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 C5P01031 1676 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 KIF1AQ12756 1690 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 KIF21AQ7Z4S6 1674 aa-0.62□□□□□ -2.51
GYPB-210ENST00000508841 SCAPERQ9BY12 1400 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 ANKRD50Q9ULJ7 1429 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 ERICH3Q5RHP9 1530 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 MAGI3Q5TCQ9 1506 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.63□□□□□ -2.51
GYPB-210ENST00000508841 DCAF1Q9Y4B6 1507 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 DEFB135Q30KP9 77 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 POLA1P09884 1462 aaPredicted RBP-0.63□□□□□ -2.51
GYPB-210ENST00000508841 MYOM2P54296 1465 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 DIP2CQ9Y2E4 1556 aa-0.63□□□□□ -2.51
GYPB-210ENST00000508841 CCDC180Q9P1Z9 1646 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 LMO7Q8WWI1 1683 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 GLI2P10070 1586 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 RB1CC1Q8TDY2 1594 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 MAGI1Q96QZ7 1491 aaPredicted RBP-0.64□□□□□ -2.51
GYPB-210ENST00000508841 PLIN4Q96Q06 1357 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 FAM25AB3EWG3 89 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 FAM25CB3EWG5 89 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 FAM25GB3EWG6 89 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 CCL22O00626 93 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 HMGA1P17096 107 aaKnown RBP-0.64□□□□□ -2.51
GYPB-210ENST00000508841 CCDC58Q4VC31 144 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 TMEM170BQ5T4T1 132 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 AMELXQ99217 191 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 LINC00470Q9BZP3 86 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 CRIPTQ9P021 101 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 FOCADQ5VW36 1801 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 NUP188Q5SRE5 1749 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 TOP2BQ02880 1626 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 MYO3AQ8NEV4 1616 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 VPS8Q8N3P4 1428 aa-0.64□□□□□ -2.51
GYPB-210ENST00000508841 NHSQ6T4R5 1651 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 ROCK2O75116 1388 aaKnown RBP-0.65□□□□□ -2.51
GYPB-210ENST00000508841 M0QZ58 72 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 TFF3Q07654 80 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 LSM10Q969L4 123 aaKnown RBP-0.65□□□□□ -2.51
GYPB-210ENST00000508841 LINC00472Q9H8W2 130 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 PIK3C2BO00750 1634 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
GYPB-210ENST00000508841 MAPKBP1O60336 1514 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 NSD3Q9BZ95 1437 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 CFAP43Q8NDM7 1665 aa-0.65□□□□□ -2.51
GYPB-210ENST00000508841 MYH4Q9Y623 1939 aa-0.66□□□□□ -2.51
GYPB-210ENST00000508841 ATP7BP35670 1465 aa-0.66□□□□□ -2.51
GYPB-210ENST00000508841 DDX60LQ5H9U9 1706 aaKnown RBP-0.66□□□□□ -2.51
GYPB-210ENST00000508841 DEFB131BA0A096LNP1 70 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 LINC01546A6NGU7 62 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 H0YGG7 62 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 CD52P31358 61 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 UBE2D2P62837 147 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 LINC01556Q5JQF7 62 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 SMIM5Q71RC9 77 aa-0.66□□□□□ -2.52
GYPB-210ENST00000508841 RICTORQ6R327 1708 aa-0.67□□□□□ -2.52
GYPB-210ENST00000508841 MAP3K1Q13233 1512 aa-0.67□□□□□ -2.52
GYPB-210ENST00000508841 UGGT2Q9NYU1 1516 aa-0.67□□□□□ -2.52
GYPB-210ENST00000508841 MT-ATP8P03928 68 aa-0.67□□□□□ -2.52
GYPB-210ENST00000508841 HTN3P15516 51 aa-0.67□□□□□ -2.52
GYPB-210ENST00000508841 TPPP2P59282 170 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms