RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 HIST1H4GQ99525 98 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
NEDD9-211ENST00000508546 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
NEDD9-211ENST00000508546 SFTA2Q6UW10 78 aa5.37□□□□□ -1.55
NEDD9-211ENST00000508546 Q8IZM0 81 aa5.37□□□□□ -1.55
NEDD9-211ENST00000508546 CEND1Q8N111 149 aa5.37□□□□□ -1.55
NEDD9-211ENST00000508546 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
NEDD9-211ENST00000508546 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
NEDD9-211ENST00000508546 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
NEDD9-211ENST00000508546 UBE2AP49459 152 aa5.36□□□□□ -1.55
NEDD9-211ENST00000508546 HERV-K104P63124 156 aa5.36□□□□□ -1.55
NEDD9-211ENST00000508546 COL5A1-AS1Q5SY13 56 aa5.36□□□□□ -1.55
NEDD9-211ENST00000508546 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
NEDD9-211ENST00000508546 A6NDN8 102 aa5.35□□□□□ -1.55
NEDD9-211ENST00000508546 TIMM17BO60830 172 aa5.35□□□□□ -1.55
NEDD9-211ENST00000508546 FXYD2P54710 66 aa5.35□□□□□ -1.55
NEDD9-211ENST00000508546 LITAFQ99732 161 aa5.35□□□□□ -1.55
NEDD9-211ENST00000508546 IGLV5-37A0A075B6J1 123 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 TMEM238LA0A1B0GVL6 79 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 A6NJY4 79 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 CXCL5P42830 114 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
NEDD9-211ENST00000508546 Q6ZVH6 145 aa5.33□□□□□ -1.56
NEDD9-211ENST00000508546 NHP2Q9NX24 153 aaKnown RBP5.33□□□□□ -1.56
NEDD9-211ENST00000508546 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
NEDD9-211ENST00000508546 SEC61BP60468 96 aaKnown RBP5.32□□□□□ -1.56
NEDD9-211ENST00000508546 RPL24P83731 157 aaKnown RBP5.32□□□□□ -1.56
NEDD9-211ENST00000508546 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
NEDD9-211ENST00000508546 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 IFITM1P13164 125 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 C3orf22Q8N5N4 141 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 DAND5Q8N907 189 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
NEDD9-211ENST00000508546 K7ERJ3 54 aa5.3□□□□□ -1.56
NEDD9-211ENST00000508546 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-211ENST00000508546 NPC2P61916 151 aa5.3□□□□□ -1.56
NEDD9-211ENST00000508546 MUSTN1Q8IVN3 82 aa5.3□□□□□ -1.56
NEDD9-211ENST00000508546 COPS9Q8WXC6 57 aa5.3□□□□□ -1.56
NEDD9-211ENST00000508546 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
NEDD9-211ENST00000508546 A0A1B0GV90 55 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 A0A1B0GWB2 263 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 A4D1N5 150 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 TAX1BP3O14907 124 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 PFN2P35080 140 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 LINC00158P58513 81 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 PRLHP81277 87 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 MIR7-3HGQ8N6C7 128 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 RAB37Q96AX2 223 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
NEDD9-211ENST00000508546 IGKV2-28A0A075B6P5 120 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 A0A0B4J2C4 111 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 IGKV2D-28P01615 120 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 MT1HP80294 61 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 COX17Q14061 63 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 FAM19A1Q7Z5A9 133 aa5.28□□□□□ -1.56
NEDD9-211ENST00000508546 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-211ENST00000508546 C4orf48Q5BLP8 95 aa5.27□□□□□ -1.57
NEDD9-211ENST00000508546 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
NEDD9-211ENST00000508546 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
NEDD9-211ENST00000508546 C9orf118A6NHY6 69 aa5.26□□□□□ -1.57
NEDD9-211ENST00000508546 CFC1BP0CG36 223 aa5.26□□□□□ -1.57
NEDD9-211ENST00000508546 CFC1P0CG37 223 aa5.26□□□□□ -1.57
NEDD9-211ENST00000508546 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
NEDD9-211ENST00000508546 USH2AO75445 5202 aa5.26□□□□□ -1.57
NEDD9-211ENST00000508546 H3BUT2 72 aa5.25□□□□□ -1.57
NEDD9-211ENST00000508546 M0R378 163 aa5.25□□□□□ -1.57
NEDD9-211ENST00000508546 NAA38Q9BRA0 125 aaKnown RBP5.25□□□□□ -1.57
NEDD9-211ENST00000508546 SND1-IT1Q9HBX3 110 aa5.25□□□□□ -1.57
NEDD9-211ENST00000508546 PRO1854Q9UHT4 67 aa5.25□□□□□ -1.57
NEDD9-211ENST00000508546 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
NEDD9-211ENST00000508546 SPINK1P00995 79 aa5.24□□□□□ -1.57
NEDD9-211ENST00000508546 VPREB1P12018 145 aa5.24□□□□□ -1.57
NEDD9-211ENST00000508546 KRTAP19-2Q3LHN2 52 aa5.24□□□□□ -1.57
NEDD9-211ENST00000508546 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
NEDD9-211ENST00000508546 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
NEDD9-211ENST00000508546 LOC107984156A0A0G2JMH3 177 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 Q1RN00 199 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 XP32Q5T750 250 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 ARL17AQ8IVW1 177 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 Q8NBF4 154 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 HIGD2AQ9BW72 106 aa5.23□□□□□ -1.57
NEDD9-211ENST00000508546 FABP2P12104 132 aa5.22□□□□□ -1.57
NEDD9-211ENST00000508546 VAMP3Q15836 100 aa5.22□□□□□ -1.57
NEDD9-211ENST00000508546 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-211ENST00000508546 TRAV13-2A0A0B4J235 113 aa5.21□□□□□ -1.58
NEDD9-211ENST00000508546 H7C2G1 150 aa5.21□□□□□ -1.58
NEDD9-211ENST00000508546 NDUFC2O95298 119 aa5.21□□□□□ -1.58
NEDD9-211ENST00000508546 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
NEDD9-211ENST00000508546 LYRM7Q5U5X0 104 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms