RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LINC00470Q9BZP3 86 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 CPSF1Q10570 1443 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 ADGRL2O95490 1459 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 ZFYVE16Q7Z3T8 1539 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 ADAMTS12P58397 1594 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 PAPPAQ13219 1627 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 ZC3H13Q5T200 1668 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 KIF21AQ7Z4S6 1674 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 SPHKAPQ2M3C7 1700 aa-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 PDCD11Q14690 1871 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P29-201ENST00000505659 UBE2L5PA0A1B0GUS4 154 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 IGLC7A0M8Q6 106 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 FAM24AA6NFZ4 105 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 MIF4GDA9UHW6 222 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 SYS1-DBNDD2H3BUS1 97 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 H7BZZ5 65 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 NDUFC1O43677 76 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 SFT2D2O95562 160 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 IFNGP01579 166 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 APOC2P02655 101 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 SFTA3P0C7M3 94 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 UBA52P62987 128 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 MUSTN1Q8IVN3 82 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB106AQ8N104 65 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB124Q8NES8 71 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 TSC22D3Q99576 134 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 SPANXDQ9BXN6 97 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 FAM107BQ9H098 131 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 HIGD1BQ9P298 99 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 CDKN2A-AS1Q9UH64 79 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 FYCO1Q9BQS8 1478 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 MBD5Q9P267 1494 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 KIAA0586Q9BVV6 1533 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 BICRAQ9NZM4 1560 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 USP32Q8NFA0 1604 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 PTPN23Q9H3S7 1636 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 CROCC2H7BZ55 1655 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 RIMS1Q86UR5 1692 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 BTAF1O14981 1849 aa-0.25□□□□□ -2.45
HMGB1P29-201ENST00000505659 A0A1B0GUL6 1792 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 CHD1O14646 1710 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 POLR1AO95602 1720 aaPredicted RBP-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 DOT1LQ8TEK3 1739 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 QRICH2Q9H0J4 1663 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 PREX2Q70Z35 1606 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 RAPGEF6Q8TEU7 1601 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 NRXN3Q9Y4C0 1643 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 ARHGEF5Q12774 1597 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 ARHGEF12Q9NZN5 1544 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 POLA1P09884 1462 aaPredicted RBP-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 GAPVD1Q14C86 1478 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 ROCK2O75116 1388 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 KTN1Q86UP2 1357 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRAV21A0A0B4J279 112 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 TMEM262E9PQX1 116 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 I3L3M4 83 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 HMGN4O00479 90 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 ACYP1P07311 99 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 COX8AP10176 69 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 COX7BP24311 80 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 LINC00158P58513 81 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 WT1-ASQ06250 92 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 WHAMMP3Q1A5X7 153 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 C9orf153Q5TBE3 101 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 SERP2Q8N6R1 65 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 MYOZ3Q8TDC0 251 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 CDC42SE2Q9NRR3 84 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 FAIMQ9NVQ4 179 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 RABAC1Q9UI14 185 aa-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.26□□□□□ -2.45
HMGB1P29-201ENST00000505659 NUP188Q5SRE5 1749 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 UBR1Q8IWV7 1749 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 MAST1Q9Y2H9 1570 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 HMGXB3Q12766 1538 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 MAP3K1Q13233 1512 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 MAGI3Q5TCQ9 1506 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 ATP7BP35670 1465 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 NCOA2Q15596 1464 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 A0A0G2JND7 137 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRBV7-4A0A0J9YYF1 115 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 C7orf77A4D0Y5 90 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 OOSP1A8MZH6 123 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 K7EP13 123 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 GNG7O60262 68 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 S100A8P05109 93 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 IFI6P09912 130 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 IAPPP10997 89 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 S100PP25815 95 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 CRIP1P50238 77 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 POLR2KP53803 58 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 UBE2L3P68036 154 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 S100A12P80511 92 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 CATR1Q13166 79 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 MRPL54Q6P161 138 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 ENHOQ6UWT2 76 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms