RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 NIPBLQ6KC79 2804 aaeCLIP2.56□□□□□ -2
PCDH11X-208ENST00000504220 A0A087WYN8 130 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 LINC00959A0A1B0GUT2 108 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 LINC00846Q9NV44 126 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 CD164L2Q6UWJ8 174 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 Q6ZSN1 163 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 SYCNQ0VAF6 134 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 NTM-AS1Q6ZSK4 140 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
PCDH11X-208ENST00000504220 HIVEP1P15822 2718 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 PDE6GP18545 87 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 LINC00313P59037 77 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CASC2Q6XLA1 102 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 LINC00208Q96KT6 92 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CDC42SE2Q9NRR3 84 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 SMIM1B2RUZ4 78 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 MRPS36P82909 103 aaKnown RBP2.55□□□□□ -2
PCDH11X-208ENST00000504220 Q8N3U1 123 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 IGLV9-49A0A0B4J1Y8 123 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 Q5VV11 94 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 NBEAL2Q6ZNJ1 2754 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CR1P17927 2039 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 ODF3L2Q3SX64 289 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 PCOTHQ58A44 107 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 RETNLBQ9BQ08 111 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 CNFNQ9BYD5 112 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LYSTQ99698 3801 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 MIFP14174 115 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q6YL49 198 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q8N6K4 173 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LINC01006Q8NI28 216 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 FBN3Q75N90 2809 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q6JHZ5 121 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LINC01547P58512 204 aaPredicted RBP2.53□□□□□ -2
PCDH11X-208ENST00000504220 COX8CQ7Z4L0 72 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 A0A096LNT2 108 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 hDV103S1A0JD37 113 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 ZNF702PQ9H963 129 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 NF1P21359 2839 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 B9D2Q9BPU9 175 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 TRAV10A0A0B4J240 114 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 SPINK1P00995 79 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 KRTAP1-1Q07627 177 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 Q6ZVQ6 151 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 Q8N814 137 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 ATP5EP2Q5VTU8 51 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 ANK2Q01484 3957 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LCE6AA0A183 80 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LYRM9A8MSI8 78 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 A0A087WSZ3 146 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 IGLV1-40P01703 118 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TENM2Q9NT68 2774 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TRAV22A0A0B4J277 110 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 MRGPRG-AS1Q2M3A8 158 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 X6R8D5 127 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 H3BQ85 93 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 C11orf72Q8NBR9 251 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 Q8IZM0 81 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 LELP1Q5T871 98 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 TMEM254Q8TBM7 123 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 PLAC8Q9NZF1 115 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 NDUFC1O43677 76 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 PRLHP81277 87 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 ESRGQ1W209 222 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 PRYO14603 147 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 KIAA0087Q14695 138 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 KIF25-AS1Q9Y6Z4 181 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00315P59091 139 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 BCE1O60756 84 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 C10orf25Q5T742 122 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 DHRS4-AS1Q9P1J3 65 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 LY6G6CO95867 125 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00612Q8N6U2 182 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 MXRA5Q9NR99 2828 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 MOBPQ13875 183 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 DNAH1Q9P2D7 4330 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 P0C880 135 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 KRTAP24-1Q3LI83 254 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 SMIM29Q86T20 159 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms