RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 SLIT1O75093 1534 aa1.17□□□□□ -2.22
SRRM1-218ENST00000494934 DEFB131BA0A096LNP1 70 aa1.17□□□□□ -2.22
SRRM1-218ENST00000494934 GLI2P10070 1586 aa1.17□□□□□ -2.22
SRRM1-218ENST00000494934 A0A1B0GUL6 1792 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 TNCP24821 2201 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 NESP48681 1621 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 PRH1P02810 166 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 COX6B1P14854 86 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 CMC2Q9NRP2 79 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 UGGT1Q9NYU2 1555 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 MROH2AA6NES4 1674 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 ANKRD36CQ5JPF3 1778 aa1.16□□□□□ -2.22
SRRM1-218ENST00000494934 I3L2K1 104 aa1.15□□□□□ -2.23
SRRM1-218ENST00000494934 K7EQZ3 153 aa1.15□□□□□ -2.23
SRRM1-218ENST00000494934 PLNP26678 52 aa1.15□□□□□ -2.23
SRRM1-218ENST00000494934 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.23
SRRM1-218ENST00000494934 KIF1AQ12756 1690 aa1.15□□□□□ -2.23
SRRM1-218ENST00000494934 ITSN2Q9NZM3 1697 aa1.15□□□□□ -2.23
SRRM1-218ENST00000494934 NOTCH1P46531 2555 aa1.13□□□□□ -2.23
SRRM1-218ENST00000494934 CDKN2A-AS1Q9UH64 79 aa1.13□□□□□ -2.23
SRRM1-218ENST00000494934 BIVM-ERCC5R4GMW8 1640 aa1.13□□□□□ -2.23
SRRM1-218ENST00000494934 TNRC6CQ9HCJ0 1690 aaKnown RBP1.13□□□□□ -2.23
SRRM1-218ENST00000494934 TJP1Q07157 1748 aa1.12□□□□□ -2.23
SRRM1-218ENST00000494934 H0YGX0 51 aa1.12□□□□□ -2.23
SRRM1-218ENST00000494934 M0R1W7 72 aa1.12□□□□□ -2.23
SRRM1-218ENST00000494934 TOMM5Q8N4H5 51 aa1.12□□□□□ -2.23
SRRM1-218ENST00000494934 FAM208BQ5VWN6 2430 aa1.11□□□□□ -2.23
SRRM1-218ENST00000494934 EFCAB6Q5THR3 1501 aa1.11□□□□□ -2.23
SRRM1-218ENST00000494934 Q5VSD8 79 aa1.11□□□□□ -2.23
SRRM1-218ENST00000494934 PRO3102Q9H379 93 aa1.11□□□□□ -2.23
SRRM1-218ENST00000494934 ABCC8Q09428 1581 aa1.11□□□□□ -2.23
SRRM1-218ENST00000494934 IQGAP2Q13576 1575 aa1.1□□□□□ -2.23
SRRM1-218ENST00000494934 A0A0D9SG42 100 aa1.1□□□□□ -2.23
SRRM1-218ENST00000494934 SPINK4O60575 86 aa1.1□□□□□ -2.23
SRRM1-218ENST00000494934 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
SRRM1-218ENST00000494934 ABCA5Q8WWZ7 1642 aa1.09□□□□□ -2.23
SRRM1-218ENST00000494934 KIAA0586Q9BVV6 1533 aa1.09□□□□□ -2.24
SRRM1-218ENST00000494934 NRXN3Q9Y4C0 1643 aa1.08□□□□□ -2.24
SRRM1-218ENST00000494934 TMEM167BQ9NRX6 74 aa1.08□□□□□ -2.24
SRRM1-218ENST00000494934 JMJD1CQ15652 2540 aa1.08□□□□□ -2.24
SRRM1-218ENST00000494934 IGIPA6NJ69 53 aa1.07□□□□□ -2.24
SRRM1-218ENST00000494934 ABRACLQ9P1F3 81 aa1.07□□□□□ -2.24
SRRM1-218ENST00000494934 APLNQ9ULZ1 77 aa1.07□□□□□ -2.24
SRRM1-218ENST00000494934 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 NDUFA3O95167 84 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 LINC00158P58513 81 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 DEPDC5O75140 1603 aa1.06□□□□□ -2.24
SRRM1-218ENST00000494934 LYNX1G3V0Z9 82 aa1.05□□□□□ -2.24
SRRM1-218ENST00000494934 SPRR1AP35321 89 aa1.05□□□□□ -2.24
SRRM1-218ENST00000494934 CRIP1P50238 77 aa1.05□□□□□ -2.24
SRRM1-218ENST00000494934 ANKRD17O75179 2603 aaKnown RBP1.05□□□□□ -2.24
SRRM1-218ENST00000494934 PLCE1Q9P212 2302 aa1.05□□□□□ -2.24
SRRM1-218ENST00000494934 SMIM27A0A1W2PRY6 76 aa1.04□□□□□ -2.24
SRRM1-218ENST00000494934 BPTFQ12830 3046 aa1.04□□□□□ -2.24
SRRM1-218ENST00000494934 SPRR1BP22528 89 aa1.03□□□□□ -2.24
SRRM1-218ENST00000494934 MINOS1Q5TGZ0 78 aa1.03□□□□□ -2.24
SRRM1-218ENST00000494934 AGLP35573 1532 aa1.03□□□□□ -2.24
SRRM1-218ENST00000494934 ZNF469Q96JG9 3925 aaPredicted RBP1.03□□□□□ -2.25
SRRM1-218ENST00000494934 PTPRQQ9UMZ3 2332 aa1.03□□□□□ -2.25
SRRM1-218ENST00000494934 CNOT1A5YKK6 2376 aaKnown RBP1.03□□□□□ -2.25
SRRM1-218ENST00000494934 C4AP0C0L4 1744 aa1.02□□□□□ -2.25
SRRM1-218ENST00000494934 C4BP0C0L5 1744 aa1.02□□□□□ -2.25
SRRM1-218ENST00000494934 FAM208AQ9UK61 1670 aaKnown RBP1.02□□□□□ -2.25
SRRM1-218ENST00000494934 TOGARAM1Q9Y4F4 1720 aa1.02□□□□□ -2.25
SRRM1-218ENST00000494934 DDX60Q8IY21 1712 aaKnown RBP1.01□□□□□ -2.25
SRRM1-218ENST00000494934 H1FX-AS1Q4G0G2 97 aa1.01□□□□□ -2.25
SRRM1-218ENST00000494934 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
SRRM1-218ENST00000494934 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
SRRM1-218ENST00000494934 PTPRZ1P23471 2315 aaPredicted RBP1□□□□□ -2.25
SRRM1-218ENST00000494934 TOP2AP11388 1531 aaKnown RBP1□□□□□ -2.25
SRRM1-218ENST00000494934 LINC01546A6NGU7 62 aa1□□□□□ -2.25
SRRM1-218ENST00000494934 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
SRRM1-218ENST00000494934 USF3Q68DE3 2245 aa1□□□□□ -2.25
SRRM1-218ENST00000494934 C6orf48Q9UBA6 75 aa0.99□□□□□ -2.25
SRRM1-218ENST00000494934 LINC00308Q8TCZ7 52 aa0.98□□□□□ -2.25
SRRM1-218ENST00000494934 TIMM8BQ9Y5J9 83 aaPredicted RBP0.98□□□□□ -2.25
SRRM1-218ENST00000494934 CDC42BPAQ5VT25 1732 aa0.98□□□□□ -2.25
SRRM1-218ENST00000494934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.97□□□□□ -2.252e-7■■■■□ 21.5
SRRM1-218ENST00000494934 IAPPP10997 89 aa0.97□□□□□ -2.25
SRRM1-218ENST00000494934 DEFB109BQ30KR1 87 aa0.97□□□□□ -2.25
SRRM1-218ENST00000494934 H0YAA0 97 aa0.96□□□□□ -2.26
SRRM1-218ENST00000494934 H3BUA1 57 aa0.96□□□□□ -2.26
SRRM1-218ENST00000494934 SPINK6Q6UWN8 80 aa0.96□□□□□ -2.26
SRRM1-218ENST00000494934 APCP25054 2843 aa0.95□□□□□ -2.26
SRRM1-218ENST00000494934 C2CD3Q4AC94 2353 aa0.95□□□□□ -2.26
SRRM1-218ENST00000494934 MEGF8Q7Z7M0 2845 aa0.95□□□□□ -2.26
SRRM1-218ENST00000494934 PIEZO2Q9H5I5 2752 aa0.94□□□□□ -2.26
SRRM1-218ENST00000494934 SPTBN2O15020 2390 aa0.93□□□□□ -2.26
SRRM1-218ENST00000494934 KLK9Q2XQG4 91 aa0.93□□□□□ -2.26
SRRM1-218ENST00000494934 SMIM2Q9BVW6 85 aa0.93□□□□□ -2.26
SRRM1-218ENST00000494934 LMO7Q8WWI1 1683 aa0.93□□□□□ -2.26
SRRM1-218ENST00000494934 SPINK1P00995 79 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 DEFB130BP0DP73 79 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 DEFB130AP0DP74 79 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 LELP1Q5T871 98 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 ATP7AQ04656 1500 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 WNK2Q9Y3S1 2297 aa0.92□□□□□ -2.26
SRRM1-218ENST00000494934 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms