RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
CLHC1-213ENST00000494539 CADP27708 2225 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 NAV3Q8IVL0 2385 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 IGIPA6NJ69 53 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 COX6B1P14854 86 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 SPINK7P58062 85 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 GAFA1Q96PS6 74 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 ANKRD17O75179 2603 aaKnown RBP0.95□□□□□ -2.26
CLHC1-213ENST00000494539 TOGARAM1Q9Y4F4 1720 aa0.95□□□□□ -2.26
CLHC1-213ENST00000494539 ZNF831Q5JPB2 1677 aa0.94□□□□□ -2.26
CLHC1-213ENST00000494539 LMO7Q8WWI1 1683 aa0.94□□□□□ -2.26
CLHC1-213ENST00000494539 H0YGX0 51 aa0.94□□□□□ -2.26
CLHC1-213ENST00000494539 RPL38P63173 70 aaKnown RBP0.94□□□□□ -2.26
CLHC1-213ENST00000494539 DEFB112Q30KQ8 113 aa0.94□□□□□ -2.26
CLHC1-213ENST00000494539 CACNA1CQ13936 2221 aa0.94□□□□□ -2.26
CLHC1-213ENST00000494539 TNCP24821 2201 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 C4AP0C0L4 1744 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 I3L3M4 83 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 M0R1W7 72 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 NDUFA4O00483 81 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 MRPL33O75394 65 aaKnown RBP0.93□□□□□ -2.26
CLHC1-213ENST00000494539 UBE2DNLQ8IWF7 75 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 KCNQ1DNQ9H478 68 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 TMEM167BQ9NRX6 74 aa0.93□□□□□ -2.26
CLHC1-213ENST00000494539 A0A0G2JMZ2 1700 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 A0A1B0GU69 56 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 LINC00959A0A1B0GUT2 108 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 ETDCA0A1B0GVM5 59 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 COX7BP24311 80 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 LRRC37AA6NMS7 1700 aa0.92□□□□□ -2.26
CLHC1-213ENST00000494539 A0A0D9SG42 100 aa0.91□□□□□ -2.26
CLHC1-213ENST00000494539 SSBP3-AS1Q7Z2R9 100 aa0.91□□□□□ -2.26
CLHC1-213ENST00000494539 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
CLHC1-213ENST00000494539 C4BP0C0L5 1744 aa0.91□□□□□ -2.26
CLHC1-213ENST00000494539 AHCTF1Q8WYP5 2266 aa0.9□□□□□ -2.26
CLHC1-213ENST00000494539 PLXNB2O15031 1838 aa0.9□□□□□ -2.27
CLHC1-213ENST00000494539 DEFB131BA0A096LNP1 70 aa0.9□□□□□ -2.27
CLHC1-213ENST00000494539 CPSF4LA6NMK7 179 aaKnown RBP0.9□□□□□ -2.27
CLHC1-213ENST00000494539 SPINK4O60575 86 aa0.9□□□□□ -2.27
CLHC1-213ENST00000494539 NDUFA3O95167 84 aa0.89□□□□□ -2.27
CLHC1-213ENST00000494539 TIMM8BQ9Y5J9 83 aaPredicted RBP0.89□□□□□ -2.27
CLHC1-213ENST00000494539 GOLGA4Q13439 2230 aaKnown RBP0.88□□□□□ -2.27
CLHC1-213ENST00000494539 SPTY2D1-AS1A0A0U1RR47 76 aa0.88□□□□□ -2.27
CLHC1-213ENST00000494539 SMIM2Q9BVW6 85 aa0.88□□□□□ -2.27
CLHC1-213ENST00000494539 CNFNQ9BYD5 112 aa0.88□□□□□ -2.27
CLHC1-213ENST00000494539 FAM208BQ5VWN6 2430 aa0.88□□□□□ -2.27
CLHC1-213ENST00000494539 ZNF462Q96JM2 2506 aa0.86□□□□□ -2.27
CLHC1-213ENST00000494539 COX6B2Q6YFQ2 88 aa0.86□□□□□ -2.27
CLHC1-213ENST00000494539 Q8IZM0 81 aa0.86□□□□□ -2.27
CLHC1-213ENST00000494539 BPTFQ12830 3046 aa0.86□□□□□ -2.27
CLHC1-213ENST00000494539 TNRC6CQ9HCJ0 1690 aaKnown RBP0.85□□□□□ -2.27
CLHC1-213ENST00000494539 URB1O60287 2271 aaKnown RBP0.85□□□□□ -2.27
CLHC1-213ENST00000494539 LYNX1G3V0Z9 82 aa0.85□□□□□ -2.27
CLHC1-213ENST00000494539 NDUFA1O15239 70 aa0.85□□□□□ -2.27
CLHC1-213ENST00000494539 LINC00158P58513 81 aa0.85□□□□□ -2.27
CLHC1-213ENST00000494539 LINC00308Q8TCZ7 52 aa0.85□□□□□ -2.27
CLHC1-213ENST00000494539 I3L2K1 104 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 K7EQZ3 153 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 CRIP1P50238 77 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 USMG5Q96IX5 58 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 TP53AIP1Q9HCN2 124 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 CRIPTQ9P021 101 aa0.84□□□□□ -2.27
CLHC1-213ENST00000494539 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.28
CLHC1-213ENST00000494539 CCL22O00626 93 aa0.83□□□□□ -2.28
CLHC1-213ENST00000494539 TFF3Q07654 80 aa0.83□□□□□ -2.28
CLHC1-213ENST00000494539 CDKN2A-AS1Q9UH64 79 aa0.83□□□□□ -2.28
CLHC1-213ENST00000494539 CNOT1A5YKK6 2376 aaKnown RBP0.83□□□□□ -2.28
CLHC1-213ENST00000494539 COX6A2Q02221 97 aa0.82□□□□□ -2.28
CLHC1-213ENST00000494539 DEFB123Q8N688 67 aa0.82□□□□□ -2.28
CLHC1-213ENST00000494539 CACNA1EQ15878 2313 aa0.82□□□□□ -2.28
CLHC1-213ENST00000494539 PDE4DIPQ5VU43 2346 aa0.82□□□□□ -2.28
CLHC1-213ENST00000494539 IAPPP10997 89 aa0.81□□□□□ -2.28
CLHC1-213ENST00000494539 PRB3Q04118 309 aaPredicted RBP0.81□□□□□ -2.28
CLHC1-213ENST00000494539 PIGYQ3MUY2 71 aa0.81□□□□□ -2.28
CLHC1-213ENST00000494539 ARHGAP5-AS1Q96IT6 56 aa0.81□□□□□ -2.28
CLHC1-213ENST00000494539 MRPL34Q9BQ48 92 aaKnown RBP0.81□□□□□ -2.28
CLHC1-213ENST00000494539 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CLHC1-213ENST00000494539 MINOS1Q5TGZ0 78 aa0.8□□□□□ -2.28
CLHC1-213ENST00000494539 PRO3102Q9H379 93 aa0.8□□□□□ -2.28
CLHC1-213ENST00000494539 C6orf48Q9UBA6 75 aa0.8□□□□□ -2.28
CLHC1-213ENST00000494539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.283e-21■■■■■ 78.4
CLHC1-213ENST00000494539 CACNA1HO95180 2353 aa0.79□□□□□ -2.28
CLHC1-213ENST00000494539 POLR2KP53803 58 aaKnown RBP0.79□□□□□ -2.28
CLHC1-213ENST00000494539 LINC01590Q5TEZ4 76 aa0.79□□□□□ -2.28
CLHC1-213ENST00000494539 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
CLHC1-213ENST00000494539 IGLV5-48A0A075B6I7 105 aa0.78□□□□□ -2.28
CLHC1-213ENST00000494539 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
CLHC1-213ENST00000494539 PLCE1Q9P212 2302 aa0.78□□□□□ -2.28
CLHC1-213ENST00000494539 LOC730098B7Z3J9 87 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 H0YAA0 97 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 DEFB131AP59861 70 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 DOPEY2Q9Y3R5 2298 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 KNL1Q8NG31 2342 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 PTPRQQ9UMZ3 2332 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 CHD9Q3L8U1 2897 aa0.77□□□□□ -2.29
CLHC1-213ENST00000494539 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
CLHC1-213ENST00000494539 C2CD3Q4AC94 2353 aa0.76□□□□□ -2.29
CLHC1-213ENST00000494539 RPS27LQ71UM5 84 aaKnown RBP0.76□□□□□ -2.29
CLHC1-213ENST00000494539 SPTBN2O15020 2390 aa0.76□□□□□ -2.29
CLHC1-213ENST00000494539 TPRP12270 2363 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms