RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PRR34Q9NV39 138 aa5.1□□□□□ -1.59
BRCA1-221ENST00000493795 ACACBO00763 2458 aa5.09□□□□□ -1.59
BRCA1-221ENST00000493795 NOTCH2Q04721 2471 aa5.08□□□□□ -1.6
BRCA1-221ENST00000493795 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
BRCA1-221ENST00000493795 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
BRCA1-221ENST00000493795 C2CD3Q4AC94 2353 aa5.08□□□□□ -1.6
BRCA1-221ENST00000493795 M0R2T5 61 aa5.08□□□□□ -1.6
BRCA1-221ENST00000493795 DOPEY1Q5JWR5 2465 aa5.07□□□□□ -1.6
BRCA1-221ENST00000493795 PTPN13Q12923 2485 aa5.06□□□□□ -1.6
BRCA1-221ENST00000493795 SPINK7P58062 85 aa5.06□□□□□ -1.6
BRCA1-221ENST00000493795 IGLV7-46A0A075B6I9 117 aa5.06□□□□□ -1.6
BRCA1-221ENST00000493795 CPAMD8Q8IZJ3 1885 aa5.06□□□□□ -1.6
BRCA1-221ENST00000493795 EIF4EBP3O60516 100 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-221ENST00000493795 MUC22E2RYF6 1773 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-221ENST00000493795 NAV2Q8IVL1 2488 aa5.04□□□□□ -1.6
BRCA1-221ENST00000493795 ABCA2Q9BZC7 2435 aa5.04□□□□□ -1.6
BRCA1-221ENST00000493795 S4R3F8 94 aa5.04□□□□□ -1.6
BRCA1-221ENST00000493795 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
BRCA1-221ENST00000493795 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
BRCA1-221ENST00000493795 CNBPP62633 177 aaKnown RBP5.03□□□□□ -1.6
BRCA1-221ENST00000493795 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
BRCA1-221ENST00000493795 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
BRCA1-221ENST00000493795 PTPRBP23467 1997 aa5.03□□□□□ -1.6
BRCA1-221ENST00000493795 CACNA1AO00555 2505 aa5.02□□□□□ -1.61
BRCA1-221ENST00000493795 KLK9Q2XQG4 91 aa5.02□□□□□ -1.61
BRCA1-221ENST00000493795 C10orf142B7Z368 130 aa5.02□□□□□ -1.61
BRCA1-221ENST00000493795 K7EIL1 84 aa5.02□□□□□ -1.61
BRCA1-221ENST00000493795 CUL9Q8IWT3 2517 aa5.01□□□□□ -1.61
BRCA1-221ENST00000493795 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
BRCA1-221ENST00000493795 LINC00612Q8N6U2 182 aa5.01□□□□□ -1.61
BRCA1-221ENST00000493795 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
BRCA1-221ENST00000493795 GIG44P09565 113 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-221ENST00000493795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-221ENST00000493795 ZCCHC13Q8WW36 166 aaKnown RBP4.98□□□□□ -1.61
BRCA1-221ENST00000493795 CCDC168Q8NDH2 2452 aa4.97□□□□□ -1.61
BRCA1-221ENST00000493795 R4GN34 69 aa4.97□□□□□ -1.61
BRCA1-221ENST00000493795 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.61
BRCA1-221ENST00000493795 ROMO1P60602 79 aa4.96□□□□□ -1.62
BRCA1-221ENST00000493795 CASC10Q5T4H9 136 aa4.96□□□□□ -1.62
BRCA1-221ENST00000493795 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
BRCA1-221ENST00000493795 SRCAPQ6ZRS2 3230 aa4.95□□□□□ -1.62
BRCA1-221ENST00000493795 MYO18BQ8IUG5 2567 aa4.94□□□□□ -1.62
BRCA1-221ENST00000493795 COL27A1Q8IZC6 1860 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-221ENST00000493795 FAM229BQ4G0N7 80 aa4.93□□□□□ -1.62
BRCA1-221ENST00000493795 PCNTO95613 3336 aa4.92□□□□□ -1.62
BRCA1-221ENST00000493795 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
BRCA1-221ENST00000493795 Q5VV11 94 aa4.92□□□□□ -1.62
BRCA1-221ENST00000493795 Q5XG85 94 aa4.92□□□□□ -1.62
BRCA1-221ENST00000493795 TTC28Q96AY4 2481 aa4.92□□□□□ -1.62
BRCA1-221ENST00000493795 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
BRCA1-221ENST00000493795 BDP1A6H8Y1 2624 aa4.91□□□□□ -1.62
BRCA1-221ENST00000493795 TNP2Q05952 138 aa4.9□□□□□ -1.62
BRCA1-221ENST00000493795 COL4A2P08572 1712 aa4.9□□□□□ -1.62
BRCA1-221ENST00000493795 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
BRCA1-221ENST00000493795 Q5W150 140 aa4.89□□□□□ -1.63
BRCA1-221ENST00000493795 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
BRCA1-221ENST00000493795 MYO9AB2RTY4 2548 aa4.88□□□□□ -1.63
BRCA1-221ENST00000493795 USP34Q70CQ2 3546 aa4.87□□□□□ -1.63
BRCA1-221ENST00000493795 FP248Q71RG6 208 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-221ENST00000493795 M0QZ58 72 aa4.87□□□□□ -1.63
BRCA1-221ENST00000493795 BRCA2P51587 3418 aa4.86□□□□□ -1.63
BRCA1-221ENST00000493795 KRTAP10-3P60369 221 aa4.86□□□□□ -1.63
BRCA1-221ENST00000493795 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
BRCA1-221ENST00000493795 ZNF462Q96JM2 2506 aa4.85□□□□□ -1.63
BRCA1-221ENST00000493795 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
BRCA1-221ENST00000493795 CENPFP49454 3210 aa4.83□□□□□ -1.64
BRCA1-221ENST00000493795 LRRK2Q5S007 2527 aa4.82□□□□□ -1.64
BRCA1-221ENST00000493795 F8P00451 2351 aa4.82□□□□□ -1.64
BRCA1-221ENST00000493795 PLAC8Q9NZF1 115 aa4.81□□□□□ -1.64
BRCA1-221ENST00000493795 A0A096LNT2 108 aa4.79□□□□□ -1.64
BRCA1-221ENST00000493795 FN1P02751 2386 aaKnown RBP4.79□□□□□ -1.64
BRCA1-221ENST00000493795 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
BRCA1-221ENST00000493795 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
BRCA1-221ENST00000493795 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
BRCA1-221ENST00000493795 SPRR1BP22528 89 aa4.76□□□□□ -1.65
BRCA1-221ENST00000493795 CYSTM1Q9H1C7 97 aa4.76□□□□□ -1.65
BRCA1-221ENST00000493795 SPRR1AP35321 89 aa4.75□□□□□ -1.65
BRCA1-221ENST00000493795 JMJD1CQ15652 2540 aa4.75□□□□□ -1.65
BRCA1-221ENST00000493795 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
BRCA1-221ENST00000493795 TLN1Q9Y490 2541 aaKnown RBP4.73□□□□□ -1.65
BRCA1-221ENST00000493795 ABCA12Q86UK0 2595 aa4.73□□□□□ -1.65
BRCA1-221ENST00000493795 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
BRCA1-221ENST00000493795 CR1P17927 2039 aa4.72□□□□□ -1.65
BRCA1-221ENST00000493795 Q8NDZ9 215 aa4.71□□□□□ -1.66
BRCA1-221ENST00000493795 IGF2RP11717 2491 aa4.71□□□□□ -1.66
BRCA1-221ENST00000493795 PIEZO2Q9H5I5 2752 aa4.71□□□□□ -1.66
BRCA1-221ENST00000493795 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
BRCA1-221ENST00000493795 NCOR2Q9Y618 2525 aa4.71□□□□□ -1.66
BRCA1-221ENST00000493795 Q5VSD8 79 aa4.69□□□□□ -1.66
BRCA1-221ENST00000493795 TLN2Q9Y4G6 2542 aa4.69□□□□□ -1.66
BRCA1-221ENST00000493795 Q6ZR54 194 aa4.69□□□□□ -1.66
BRCA1-221ENST00000493795 PANO1I0J062 215 aa4.68□□□□□ -1.66
BRCA1-221ENST00000493795 REV3LO60673 3130 aa4.68□□□□□ -1.66
BRCA1-221ENST00000493795 PCSK5Q92824 1860 aa4.67□□□□□ -1.66
BRCA1-221ENST00000493795 OXTP01178 125 aa4.67□□□□□ -1.66
BRCA1-221ENST00000493795 HTTP42858 3142 aa4.65□□□□□ -1.66
BRCA1-221ENST00000493795 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
BRCA1-221ENST00000493795 ACANP16112 2415 aa4.65□□□□□ -1.67
BRCA1-221ENST00000493795 LAMA3Q16787 3333 aa4.64□□□□□ -1.67
BRCA1-221ENST00000493795 ZFYVE26Q68DK2 2539 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms