RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
NUP50-217ENST00000491860 MOBPQ13875 183 aa4.96□□□□□ -1.62
NUP50-217ENST00000491860 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
NUP50-217ENST00000491860 A0A0J9YXY3 114 aa4.95□□□□□ -1.62
NUP50-217ENST00000491860 ZNF73O43830 326 aaPredicted RBP4.95□□□□□ -1.62
NUP50-217ENST00000491860 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
NUP50-217ENST00000491860 Q9BRP9 147 aa4.95□□□□□ -1.62
NUP50-217ENST00000491860 TIMM17BO60830 172 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 C9orf153Q5TBE3 101 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 SPANXCQ9NY87 97 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 DHRS4-AS1Q9P1J3 65 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
NUP50-217ENST00000491860 LINC00518Q8N0U6 118 aa4.93□□□□□ -1.62
NUP50-217ENST00000491860 Q8N377 158 aa4.93□□□□□ -1.62
NUP50-217ENST00000491860 COPS9Q8WXC6 57 aa4.93□□□□□ -1.62
NUP50-217ENST00000491860 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
NUP50-217ENST00000491860 SPANXDQ9BXN6 97 aa4.93□□□□□ -1.62
NUP50-217ENST00000491860 COLCA2A8K830 154 aa4.92□□□□□ -1.62
NUP50-217ENST00000491860 SYS1-DBNDD2H3BUS1 97 aa4.92□□□□□ -1.62
NUP50-217ENST00000491860 PET117Q6UWS5 81 aa4.92□□□□□ -1.62
NUP50-217ENST00000491860 SPRR1BP22528 89 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 AKR1D1P51857 326 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 NPC2P61916 151 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 SOSTDC1Q6X4U4 206 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 LINC00308Q8TCZ7 52 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
NUP50-217ENST00000491860 ADAMTSL4-AS1Q5T5F5 129 aa4.9□□□□□ -1.63
NUP50-217ENST00000491860 LINC01545Q5VT33 79 aa4.9□□□□□ -1.63
NUP50-217ENST00000491860 ZNF815PA8K554 130 aa4.89□□□□□ -1.63
NUP50-217ENST00000491860 LINC01547P58512 204 aaPredicted RBP4.89□□□□□ -1.63
NUP50-217ENST00000491860 TRBV7-6A0A0J9YX20 115 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 C20orf202A1L168 122 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BKO60814 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BJP06899 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BOP23527 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BBP33778 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BDP58876 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BCP62807 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 CD164Q04900 197 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST2H2BEQ16778 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.88□□□□□ -1.63
NUP50-217ENST00000491860 XP32Q5T750 250 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 Q6ZVH6 145 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BHQ93079 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 LITAFQ99732 161 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BNQ99877 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 HIST1H2BMQ99879 126 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
NUP50-217ENST00000491860 IFITM1P13164 125 aa4.87□□□□□ -1.63
NUP50-217ENST00000491860 COX7BP24311 80 aa4.87□□□□□ -1.63
NUP50-217ENST00000491860 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
NUP50-217ENST00000491860 SLC7A5P1Q8MH63 180 aa4.87□□□□□ -1.63
NUP50-217ENST00000491860 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
NUP50-217ENST00000491860 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 A0A1B0GWB2 263 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 A4D1N5 150 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 EIF4EBP3O60516 100 aaPredicted RBP4.86□□□□□ -1.63
NUP50-217ENST00000491860 TAL2Q16559 108 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 SCGB1D4Q6XE38 83 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 PRO1933Q9H354 126 aa4.86□□□□□ -1.63
NUP50-217ENST00000491860 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
NUP50-217ENST00000491860 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
NUP50-217ENST00000491860 C3orf79P0CE67 100 aa4.84□□□□□ -1.63
NUP50-217ENST00000491860 COA6Q5JTJ3 125 aaKnown RBP4.84□□□□□ -1.63
NUP50-217ENST00000491860 H7C2G1 150 aa4.83□□□□□ -1.64
NUP50-217ENST00000491860 SNRPEP62304 92 aaKnown RBP4.83□□□□□ -1.64
NUP50-217ENST00000491860 Q5XG85 94 aa4.83□□□□□ -1.64
NUP50-217ENST00000491860 TRAV13-2A0A0B4J235 113 aa4.82□□□□□ -1.64
NUP50-217ENST00000491860 A6NDN8 102 aa4.82□□□□□ -1.64
NUP50-217ENST00000491860 KRTDAPP60985 99 aa4.82□□□□□ -1.64
NUP50-217ENST00000491860 HRCT1Q6UXD1 115 aa4.81□□□□□ -1.64
NUP50-217ENST00000491860 DEFB105AQ8NG35 78 aa4.81□□□□□ -1.64
NUP50-217ENST00000491860 IGLV5-48A0A075B6I7 105 aa4.8□□□□□ -1.64
NUP50-217ENST00000491860 VAMP3Q15836 100 aa4.8□□□□□ -1.64
NUP50-217ENST00000491860 Q1RN00 199 aa4.8□□□□□ -1.64
NUP50-217ENST00000491860 TCL1BO95988 128 aa4.79□□□□□ -1.64
NUP50-217ENST00000491860 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
NUP50-217ENST00000491860 F8WEM9 126 aa4.78□□□□□ -1.64
NUP50-217ENST00000491860 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
NUP50-217ENST00000491860 MUSTN1Q8IVN3 82 aa4.78□□□□□ -1.64
NUP50-217ENST00000491860 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
NUP50-217ENST00000491860 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
NUP50-217ENST00000491860 HSBP1L1C9JCN9 74 aa4.77□□□□□ -1.65
NUP50-217ENST00000491860 IGLV8-61A0A075B6I0 122 aa4.76□□□□□ -1.65
NUP50-217ENST00000491860 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NUP50-217ENST00000491860 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
NUP50-217ENST00000491860 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
NUP50-217ENST00000491860 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
NUP50-217ENST00000491860 Q6JHZ5 121 aa4.75□□□□□ -1.65
NUP50-217ENST00000491860 PCP2Q8IVA1 136 aa4.75□□□□□ -1.65
NUP50-217ENST00000491860 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
NUP50-217ENST00000491860 S100A2P29034 98 aa4.74□□□□□ -1.65
NUP50-217ENST00000491860 ATOH7Q8N100 152 aa4.74□□□□□ -1.65
NUP50-217ENST00000491860 PPDPFLQ8WWR9 84 aa4.74□□□□□ -1.65
NUP50-217ENST00000491860 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
NUP50-217ENST00000491860 hADV29S1A0JD25 119 aa4.72□□□□□ -1.65
NUP50-217ENST00000491860 SNCGO76070 127 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms