RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 Q8NBF4 154 aa17.99■□□□□ 0.47
LDB1-204ENST00000490751 C3orf79P0CE67 100 aa17.98■□□□□ 0.47
LDB1-204ENST00000490751 C4orf48Q5BLP8 95 aa17.98■□□□□ 0.47
LDB1-204ENST00000490751 LITAFQ99732 161 aa17.98■□□□□ 0.47
LDB1-204ENST00000490751 IGLV7-46A0A075B6I9 117 aa17.97■□□□□ 0.47
LDB1-204ENST00000490751 COA6Q5JTJ3 125 aaKnown RBP17.96■□□□□ 0.47
LDB1-204ENST00000490751 TIMM17BO60830 172 aa17.95■□□□□ 0.46
LDB1-204ENST00000490751 LINC00308Q8TCZ7 52 aa17.95■□□□□ 0.46
LDB1-204ENST00000490751 ZNF815PA8K554 130 aa17.94■□□□□ 0.46
LDB1-204ENST00000490751 ZNF73O43830 326 aaPredicted RBP17.93■□□□□ 0.46
LDB1-204ENST00000490751 TPRXLQ17RH7 258 aa17.93■□□□□ 0.46
LDB1-204ENST00000490751 TTTY13Q9BZ97 58 aa17.93■□□□□ 0.46
LDB1-204ENST00000490751 KRTDAPP60985 99 aa17.92■□□□□ 0.46
LDB1-204ENST00000490751 JOSD1Q15040 202 aaPredicted RBP17.92■□□□□ 0.46
LDB1-204ENST00000490751 SPANXCQ9NY87 97 aa17.92■□□□□ 0.46
LDB1-204ENST00000490751 MUC2Q02817 5179 aa17.9■□□□□ 0.46
LDB1-204ENST00000490751 IGLV9-49A0A0B4J1Y8 123 aa17.89■□□□□ 0.45
LDB1-204ENST00000490751 MOBPQ13875 183 aa17.89■□□□□ 0.45
LDB1-204ENST00000490751 CDIP1Q9H305 208 aa17.89■□□□□ 0.45
LDB1-204ENST00000490751 CBY1Q9Y3M2 126 aa17.87■□□□□ 0.45
LDB1-204ENST00000490751 OR13C6PQ8NH95 151 aa17.86■□□□□ 0.45
LDB1-204ENST00000490751 SPINK1P00995 79 aa17.85■□□□□ 0.45
LDB1-204ENST00000490751 HINT1P49773 126 aaPredicted RBP17.83■□□□□ 0.44
LDB1-204ENST00000490751 C20orf202A1L168 122 aa17.82■□□□□ 0.44
LDB1-204ENST00000490751 FP248Q71RG6 208 aaPredicted RBP17.82■□□□□ 0.44
LDB1-204ENST00000490751 SSBP3-AS1Q7Z2R9 100 aa17.82■□□□□ 0.44
LDB1-204ENST00000490751 ST20-AS1Q8NBB2 130 aa17.8■□□□□ 0.44
LDB1-204ENST00000490751 SPANXDQ9BXN6 97 aa17.8■□□□□ 0.44
LDB1-204ENST00000490751 MUC17Q685J3 4493 aa17.78■□□□□ 0.44
LDB1-204ENST00000490751 ANKRD39Q53RE8 183 aa17.78■□□□□ 0.44
LDB1-204ENST00000490751 SCGB1D4Q6XE38 83 aa17.77■□□□□ 0.44
LDB1-204ENST00000490751 ATOH7Q8N100 152 aa17.76■□□□□ 0.43
LDB1-204ENST00000490751 LINC00518Q8N0U6 118 aa17.75■□□□□ 0.43
LDB1-204ENST00000490751 C5orf52A6NGY3 159 aa17.74■□□□□ 0.43
LDB1-204ENST00000490751 C9orf153Q5TBE3 101 aa17.74■□□□□ 0.43
LDB1-204ENST00000490751 RPS29P62273 56 aaKnown RBP17.72■□□□□ 0.43
LDB1-204ENST00000490751 A0A0U1RQV1 116 aa17.71■□□□□ 0.43
LDB1-204ENST00000490751 DHRS4-AS1Q9P1J3 65 aa17.7■□□□□ 0.42
LDB1-204ENST00000490751 C6orf99Q4VX62 202 aa17.68■□□□□ 0.42
LDB1-204ENST00000490751 Q8N377 158 aa17.68■□□□□ 0.42
LDB1-204ENST00000490751 AKR1D1P51857 326 aa17.67■□□□□ 0.42
LDB1-204ENST00000490751 COX7BP24311 80 aa17.66■□□□□ 0.42
LDB1-204ENST00000490751 ELOF1P60002 83 aaKnown RBP17.66■□□□□ 0.42
LDB1-204ENST00000490751 KRTAP13-3Q3SY46 172 aa17.66■□□□□ 0.42
LDB1-204ENST00000490751 PCP2Q8IVA1 136 aa17.66■□□□□ 0.42
LDB1-204ENST00000490751 SPRR1BP22528 89 aa17.65■□□□□ 0.42
LDB1-204ENST00000490751 COPS9Q8WXC6 57 aa17.65■□□□□ 0.42
LDB1-204ENST00000490751 IFITM1P13164 125 aa17.64■□□□□ 0.41
LDB1-204ENST00000490751 Q6ZVH6 145 aa17.62■□□□□ 0.41
LDB1-204ENST00000490751 SLC25A20O43772 301 aa17.61■□□□□ 0.41
LDB1-204ENST00000490751 SLC25A34Q6PIV7 304 aa17.6■□□□□ 0.41
LDB1-204ENST00000490751 MUSTN1Q8IVN3 82 aa17.59■□□□□ 0.41
LDB1-204ENST00000490751 HIST3H2BBQ8N257 126 aa17.58■□□□□ 0.4
LDB1-204ENST00000490751 A6NDN8 102 aa17.57■□□□□ 0.4
LDB1-204ENST00000490751 SNRPEP62304 92 aaKnown RBP17.57■□□□□ 0.4
LDB1-204ENST00000490751 TRBV7-6A0A0J9YX20 115 aa17.55■□□□□ 0.4
LDB1-204ENST00000490751 HIST1H2BLQ99880 126 aa17.55■□□□□ 0.4
LDB1-204ENST00000490751 LAMTOR3Q9UHA4 124 aa17.55■□□□□ 0.4
LDB1-204ENST00000490751 S100A2P29034 98 aa17.54■□□□□ 0.4
LDB1-204ENST00000490751 TAL2Q16559 108 aa17.52■□□□□ 0.4
LDB1-204ENST00000490751 A0A1B0GWB2 263 aa17.51■□□□□ 0.39
LDB1-204ENST00000490751 DEFB105AQ8NG35 78 aa17.51■□□□□ 0.39
LDB1-204ENST00000490751 S100A1P23297 94 aa17.49■□□□□ 0.39
LDB1-204ENST00000490751 FAT4Q6V0I7 4981 aa17.48■□□□□ 0.39
LDB1-204ENST00000490751 Q1RN00 199 aa17.48■□□□□ 0.39
LDB1-204ENST00000490751 HRCT1Q6UXD1 115 aa17.47■□□□□ 0.39
LDB1-204ENST00000490751 TEX49A0A1B0GTD5 131 aa17.46■□□□□ 0.39
LDB1-204ENST00000490751 TRAV13-2A0A0B4J235 113 aa17.45■□□□□ 0.38
LDB1-204ENST00000490751 HSBP1L1C9JCN9 74 aa17.44■□□□□ 0.38
LDB1-204ENST00000490751 LIMD2Q9BT23 127 aa17.44■□□□□ 0.38
LDB1-204ENST00000490751 ASB16-AS1Q495Z4 193 aa17.43■□□□□ 0.38
LDB1-204ENST00000490751 S100A6P06703 90 aa17.42■□□□□ 0.38
LDB1-204ENST00000490751 SMIM11BQ8TCY0 68 aa17.41■□□□□ 0.38
LDB1-204ENST00000490751 A4D1N5 150 aa17.4■□□□□ 0.38
LDB1-204ENST00000490751 IGLV5-48A0A075B6I7 105 aa17.39■□□□□ 0.37
LDB1-204ENST00000490751 LINC01547P58512 204 aaPredicted RBP17.39■□□□□ 0.37
LDB1-204ENST00000490751 SMIM29Q86T20 159 aa17.38■□□□□ 0.37
LDB1-204ENST00000490751 PRO1933Q9H354 126 aa17.38■□□□□ 0.37
LDB1-204ENST00000490751 LCE2AQ5TA79 106 aaPredicted RBP17.37■□□□□ 0.37
LDB1-204ENST00000490751 SEC61BP60468 96 aaKnown RBP17.36■□□□□ 0.37
LDB1-204ENST00000490751 NHP2Q9NX24 153 aaKnown RBP17.35■□□□□ 0.37
LDB1-204ENST00000490751 CD164Q04900 197 aa17.34■□□□□ 0.37
LDB1-204ENST00000490751 XP32Q5T750 250 aa17.32■□□□□ 0.36
LDB1-204ENST00000490751 H7C2G1 150 aa17.29■□□□□ 0.36
LDB1-204ENST00000490751 SCGB1D1O95968 90 aa17.27■□□□□ 0.36
LDB1-204ENST00000490751 VAMP3Q15836 100 aa17.26■□□□□ 0.35
LDB1-204ENST00000490751 KRTAP4-1Q9BYQ7 146 aa17.26■□□□□ 0.35
LDB1-204ENST00000490751 A0A0G2JQZ4 141 aa17.24■□□□□ 0.35
LDB1-204ENST00000490751 LINC00575Q6W349 94 aa17.21■□□□□ 0.35
LDB1-204ENST00000490751 Q5XG85 94 aa17.19■□□□□ 0.34
LDB1-204ENST00000490751 HIST1H4GQ99525 98 aa17.19■□□□□ 0.34
LDB1-204ENST00000490751 COX8AP10176 69 aa17.18■□□□□ 0.34
LDB1-204ENST00000490751 C12orf57Q99622 126 aa17.18■□□□□ 0.34
LDB1-204ENST00000490751 C9orf92A6NGG3 77 aa17.17■□□□□ 0.34
LDB1-204ENST00000490751 hADV29S1A0JD25 119 aa17.15■□□□□ 0.34
LDB1-204ENST00000490751 Q6ZQY7 126 aa17.15■□□□□ 0.34
LDB1-204ENST00000490751 F8WEM9 126 aa17.13■□□□□ 0.33
LDB1-204ENST00000490751 C1orf195Q5TG92 126 aa17.12■□□□□ 0.33
LDB1-204ENST00000490751 DLEU1O43261 78 aa17.1■□□□□ 0.33
LDB1-204ENST00000490751 BVES-AS1Q5T3Y7 98 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms