RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
POLR2J3-205ENST00000489144 HAMPP81172 84 aa12.28□□□□□ -0.44
POLR2J3-205ENST00000489144 NREPQ16612 68 aa12.28□□□□□ -0.44
POLR2J3-205ENST00000489144 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
POLR2J3-205ENST00000489144 ANGP03950 147 aaKnown RBP12.27□□□□□ -0.44
POLR2J3-205ENST00000489144 CXCL6P80162 114 aa12.27□□□□□ -0.44
POLR2J3-205ENST00000489144 KTN1-AS1Q86SY8 53 aa12.27□□□□□ -0.44
POLR2J3-205ENST00000489144 PRYO14603 147 aa12.26□□□□□ -0.45
POLR2J3-205ENST00000489144 Q6ZRP5 223 aa12.26□□□□□ -0.45
POLR2J3-205ENST00000489144 WFDC10BQ8IUB3 73 aa12.25□□□□□ -0.45
POLR2J3-205ENST00000489144 TENM2Q9NT68 2774 aa12.25□□□□□ -0.45
POLR2J3-205ENST00000489144 Q6ZVQ6 151 aa12.24□□□□□ -0.45
POLR2J3-205ENST00000489144 CSMD3Q7Z407 3707 aa12.24□□□□□ -0.45
POLR2J3-205ENST00000489144 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
POLR2J3-205ENST00000489144 hDV103S1A0JD37 113 aa12.24□□□□□ -0.45
POLR2J3-205ENST00000489144 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
POLR2J3-205ENST00000489144 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
POLR2J3-205ENST00000489144 LELP1Q5T871 98 aa12.22□□□□□ -0.45
POLR2J3-205ENST00000489144 Q6ZQT0 140 aa12.22□□□□□ -0.45
POLR2J3-205ENST00000489144 FAM19A3Q7Z5A8 133 aa12.21□□□□□ -0.45
POLR2J3-205ENST00000489144 Q8N814 137 aa12.2□□□□□ -0.46
POLR2J3-205ENST00000489144 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
POLR2J3-205ENST00000489144 REG3AQ06141 175 aa12.19□□□□□ -0.46
POLR2J3-205ENST00000489144 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
POLR2J3-205ENST00000489144 PSPHP1O15172 72 aa12.19□□□□□ -0.46
POLR2J3-205ENST00000489144 CCL18P55774 89 aa12.19□□□□□ -0.46
POLR2J3-205ENST00000489144 BPY2O14599 106 aa12.18□□□□□ -0.46
POLR2J3-205ENST00000489144 LOC110117498A0A087WWA1 95 aa12.18□□□□□ -0.46
POLR2J3-205ENST00000489144 IGHV3OR16-9A0A0B4J2B5 98 aa12.17□□□□□ -0.46
POLR2J3-205ENST00000489144 M0R378 163 aa12.17□□□□□ -0.46
POLR2J3-205ENST00000489144 TRAV22A0A0B4J277 110 aa12.16□□□□□ -0.46
POLR2J3-205ENST00000489144 LRCOL1A6NCL2 159 aa12.16□□□□□ -0.46
POLR2J3-205ENST00000489144 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-205ENST00000489144 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
POLR2J3-205ENST00000489144 LINC00158P58513 81 aa12.14□□□□□ -0.47
POLR2J3-205ENST00000489144 UBE2BP63146 152 aa12.14□□□□□ -0.47
POLR2J3-205ENST00000489144 B9D2Q9BPU9 175 aa12.14□□□□□ -0.47
POLR2J3-205ENST00000489144 H3BNG1 76 aa12.12□□□□□ -0.47
POLR2J3-205ENST00000489144 M0R2N4 97 aa12.12□□□□□ -0.47
POLR2J3-205ENST00000489144 SYCNQ0VAF6 134 aa12.12□□□□□ -0.47
POLR2J3-205ENST00000489144 TGP01266 2768 aa12.11□□□□□ -0.47
POLR2J3-205ENST00000489144 NDUFS5O43920 106 aa12.1□□□□□ -0.47
POLR2J3-205ENST00000489144 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
POLR2J3-205ENST00000489144 COX7B2Q8TF08 81 aa12.1□□□□□ -0.47
POLR2J3-205ENST00000489144 OCR1Q9BZK8 76 aa12.1□□□□□ -0.47
POLR2J3-205ENST00000489144 HIGD2AQ9BW72 106 aa12.08□□□□□ -0.48
POLR2J3-205ENST00000489144 A8MU10 97 aa12.08□□□□□ -0.48
POLR2J3-205ENST00000489144 FBN3Q75N90 2809 aa12.07□□□□□ -0.48
POLR2J3-205ENST00000489144 PDE6GP18545 87 aa12.07□□□□□ -0.48
POLR2J3-205ENST00000489144 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-205ENST00000489144 SCXQ7RTU7 201 aa12.06□□□□□ -0.48
POLR2J3-205ENST00000489144 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
POLR2J3-205ENST00000489144 STARD9Q9P2P6 4700 aa12.05□□□□□ -0.48
POLR2J3-205ENST00000489144 A8MUN3 132 aa12.04□□□□□ -0.48
POLR2J3-205ENST00000489144 PRR34Q9NV39 138 aa12.04□□□□□ -0.48
POLR2J3-205ENST00000489144 PHF5AQ7RTV0 110 aaKnown RBP12.03□□□□□ -0.48
POLR2J3-205ENST00000489144 DNAH10Q8IVF4 4471 aa12.02□□□□□ -0.48
POLR2J3-205ENST00000489144 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
POLR2J3-205ENST00000489144 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-205ENST00000489144 H3BS24 57 aa12□□□□□ -0.49
POLR2J3-205ENST00000489144 UBE2AP49459 152 aa12□□□□□ -0.49
POLR2J3-205ENST00000489144 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
POLR2J3-205ENST00000489144 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
POLR2J3-205ENST00000489144 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
POLR2J3-205ENST00000489144 Q5VV11 94 aa11.99□□□□□ -0.49
POLR2J3-205ENST00000489144 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
POLR2J3-205ENST00000489144 C16orf90A8MZG2 172 aa11.99□□□□□ -0.49
POLR2J3-205ENST00000489144 PSCAO43653 123 aa11.98□□□□□ -0.49
POLR2J3-205ENST00000489144 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
POLR2J3-205ENST00000489144 C10orf25Q5T742 122 aa11.98□□□□□ -0.49
POLR2J3-205ENST00000489144 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
POLR2J3-205ENST00000489144 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
POLR2J3-205ENST00000489144 DYNC2H1Q8NCM8 4307 aaKnown RBP11.96□□□□□ -0.49
POLR2J3-205ENST00000489144 SPAG11BQ08648 103 aa11.96□□□□□ -0.5
POLR2J3-205ENST00000489144 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.5
POLR2J3-205ENST00000489144 CASC10Q5T4H9 136 aa11.95□□□□□ -0.5
POLR2J3-205ENST00000489144 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
POLR2J3-205ENST00000489144 Q8IZM0 81 aa11.95□□□□□ -0.5
POLR2J3-205ENST00000489144 SPTSSBQ8NFR3 76 aa11.95□□□□□ -0.5
POLR2J3-205ENST00000489144 MUC7Q8TAX7 377 aa11.95□□□□□ -0.5
POLR2J3-205ENST00000489144 LINC00575Q6W349 94 aa11.94□□□□□ -0.5
POLR2J3-205ENST00000489144 A6NN06 94 aa11.94□□□□□ -0.5
POLR2J3-205ENST00000489144 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
POLR2J3-205ENST00000489144 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
POLR2J3-205ENST00000489144 IGKV4-1P06312 121 aa11.93□□□□□ -0.5
POLR2J3-205ENST00000489144 CYP4F30PQ9H0H9 118 aa11.92□□□□□ -0.5
POLR2J3-205ENST00000489144 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
POLR2J3-205ENST00000489144 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
POLR2J3-205ENST00000489144 KRTAP1-5Q9BYS1 174 aa11.92□□□□□ -0.5
POLR2J3-205ENST00000489144 CHKB-CPT1BH3BT56 60 aa11.91□□□□□ -0.5
POLR2J3-205ENST00000489144 LCE6AA0A183 80 aa11.9□□□□□ -0.5
POLR2J3-205ENST00000489144 HCG22E2RYF7 251 aa11.9□□□□□ -0.5
POLR2J3-205ENST00000489144 Q8N9L7 120 aa11.9□□□□□ -0.5
POLR2J3-205ENST00000489144 H3BQ85 93 aa11.89□□□□□ -0.51
POLR2J3-205ENST00000489144 C6orf99Q4VX62 202 aa11.89□□□□□ -0.51
POLR2J3-205ENST00000489144 C15orf56Q8N910 161 aa11.89□□□□□ -0.51
POLR2J3-205ENST00000489144 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
POLR2J3-205ENST00000489144 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
POLR2J3-205ENST00000489144 PRR3P79522 188 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-205ENST00000489144 LCA10Q71F78 164 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms