RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SPRR1AP35321 89 aa5.34□□□□□ -1.55
HDAC6-232ENST00000489053 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
HDAC6-232ENST00000489053 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 B5MCH6 92 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 ZNF73O43830 326 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-232ENST00000489053 IGLV6-57P01721 117 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 COA6Q5JTJ3 125 aaKnown RBP5.33□□□□□ -1.56
HDAC6-232ENST00000489053 Q6ZRX8 168 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 LINC00518Q8N0U6 118 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 C3orf22Q8N5N4 141 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 LINC00308Q8TCZ7 52 aa5.33□□□□□ -1.56
HDAC6-232ENST00000489053 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
HDAC6-232ENST00000489053 S100A6P06703 90 aa5.32□□□□□ -1.56
HDAC6-232ENST00000489053 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
HDAC6-232ENST00000489053 SPANXDQ9BXN6 97 aa5.32□□□□□ -1.56
HDAC6-232ENST00000489053 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
HDAC6-232ENST00000489053 LPAP08519 4548 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 CTAG1AP78358 180 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 ATOH7Q8N100 152 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 Q8NBF4 154 aa5.31□□□□□ -1.56
HDAC6-232ENST00000489053 IGLV7-46A0A075B6I9 117 aa5.3□□□□□ -1.56
HDAC6-232ENST00000489053 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-232ENST00000489053 MOBPQ13875 183 aa5.3□□□□□ -1.56
HDAC6-232ENST00000489053 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
HDAC6-232ENST00000489053 CDIP1Q9H305 208 aa5.3□□□□□ -1.56
HDAC6-232ENST00000489053 SNRPEP62304 92 aaKnown RBP5.29□□□□□ -1.56
HDAC6-232ENST00000489053 TTTY13Q9BZ97 58 aa5.29□□□□□ -1.56
HDAC6-232ENST00000489053 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
HDAC6-232ENST00000489053 A6NDN8 102 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 ERC2-IT1O76042 136 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 SPINK1P00995 79 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 IFITM1P13164 125 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 COX7BP24311 80 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 LINC00483Q53H64 154 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 Q6ZVH6 145 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 LITAFQ99732 161 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 Q9BRP9 147 aa5.28□□□□□ -1.56
HDAC6-232ENST00000489053 A0A0U1RQV1 116 aa5.27□□□□□ -1.57
HDAC6-232ENST00000489053 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-232ENST00000489053 ANKRD39Q53RE8 183 aa5.27□□□□□ -1.57
HDAC6-232ENST00000489053 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
HDAC6-232ENST00000489053 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
HDAC6-232ENST00000489053 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-232ENST00000489053 LAMTOR3Q9UHA4 124 aa5.26□□□□□ -1.57
HDAC6-232ENST00000489053 TRAV13-2A0A0B4J235 113 aa5.25□□□□□ -1.57
HDAC6-232ENST00000489053 TAL2Q16559 108 aa5.25□□□□□ -1.57
HDAC6-232ENST00000489053 C6orf99Q4VX62 202 aa5.25□□□□□ -1.57
HDAC6-232ENST00000489053 PCP2Q8IVA1 136 aa5.25□□□□□ -1.57
HDAC6-232ENST00000489053 HIST3H2BBQ8N257 126 aa5.25□□□□□ -1.57
HDAC6-232ENST00000489053 SCGB1D1O95968 90 aa5.24□□□□□ -1.57
HDAC6-232ENST00000489053 MUSTN1Q8IVN3 82 aa5.24□□□□□ -1.57
HDAC6-232ENST00000489053 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
HDAC6-232ENST00000489053 DEFB105AQ8NG35 78 aa5.24□□□□□ -1.57
HDAC6-232ENST00000489053 HIST1H2BLQ99880 126 aa5.24□□□□□ -1.57
HDAC6-232ENST00000489053 NHP2Q9NX24 153 aaKnown RBP5.24□□□□□ -1.57
HDAC6-232ENST00000489053 SLC25A20O43772 301 aa5.23□□□□□ -1.57
HDAC6-232ENST00000489053 ELOF1P60002 83 aaKnown RBP5.23□□□□□ -1.57
HDAC6-232ENST00000489053 TPRXLQ17RH7 258 aa5.23□□□□□ -1.57
HDAC6-232ENST00000489053 TMA7Q9Y2S6 64 aaKnown RBP5.23□□□□□ -1.57
HDAC6-232ENST00000489053 TRBV7-6A0A0J9YX20 115 aa5.22□□□□□ -1.57
HDAC6-232ENST00000489053 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
HDAC6-232ENST00000489053 A4D1N5 150 aa5.22□□□□□ -1.57
HDAC6-232ENST00000489053 VAMP3Q15836 100 aa5.22□□□□□ -1.57
HDAC6-232ENST00000489053 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
HDAC6-232ENST00000489053 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
HDAC6-232ENST00000489053 TEX49A0A1B0GTD5 131 aa5.2□□□□□ -1.58
HDAC6-232ENST00000489053 Q1RN00 199 aa5.19□□□□□ -1.58
HDAC6-232ENST00000489053 HRCT1Q6UXD1 115 aa5.19□□□□□ -1.58
HDAC6-232ENST00000489053 HIST1H4GQ99525 98 aa5.19□□□□□ -1.58
HDAC6-232ENST00000489053 PRO1933Q9H354 126 aa5.19□□□□□ -1.58
HDAC6-232ENST00000489053 F8WEM9 126 aa5.18□□□□□ -1.58
HDAC6-232ENST00000489053 SPRR1BP22528 89 aa5.18□□□□□ -1.58
HDAC6-232ENST00000489053 H7C2G1 150 aa5.17□□□□□ -1.58
HDAC6-232ENST00000489053 Q8N377 158 aa5.17□□□□□ -1.58
HDAC6-232ENST00000489053 SMIM11BQ8TCY0 68 aa5.17□□□□□ -1.58
HDAC6-232ENST00000489053 SNCGO76070 127 aa5.16□□□□□ -1.58
HDAC6-232ENST00000489053 C12orf57Q99622 126 aa5.15□□□□□ -1.59
HDAC6-232ENST00000489053 MUC2Q02817 5179 aa5.15□□□□□ -1.59
HDAC6-232ENST00000489053 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
HDAC6-232ENST00000489053 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
HDAC6-232ENST00000489053 RAB37Q96AX2 223 aa5.14□□□□□ -1.59
HDAC6-232ENST00000489053 VAMP8Q9BV40 100 aa5.14□□□□□ -1.59
HDAC6-232ENST00000489053 hADV29S1A0JD25 119 aa5.13□□□□□ -1.59
HDAC6-232ENST00000489053 COX8AP10176 69 aa5.13□□□□□ -1.59
HDAC6-232ENST00000489053 CD164Q04900 197 aa5.13□□□□□ -1.59
HDAC6-232ENST00000489053 BVES-AS1Q5T3Y7 98 aa5.13□□□□□ -1.59
HDAC6-232ENST00000489053 PAM16Q9Y3D7 125 aa5.13□□□□□ -1.59
HDAC6-232ENST00000489053 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
HDAC6-232ENST00000489053 SPATA45Q537H7 98 aa5.12□□□□□ -1.59
HDAC6-232ENST00000489053 C14orf144Q96I85 54 aa5.12□□□□□ -1.59
HDAC6-232ENST00000489053 DLEU1O43261 78 aa5.11□□□□□ -1.59
HDAC6-232ENST00000489053 TCL1BO95988 128 aa5.11□□□□□ -1.59
HDAC6-232ENST00000489053 LINC00575Q6W349 94 aa5.11□□□□□ -1.59
HDAC6-232ENST00000489053 TMEM238LA0A1B0GVL6 79 aa5.1□□□□□ -1.59
HDAC6-232ENST00000489053 A6NJY4 79 aa5.1□□□□□ -1.59
HDAC6-232ENST00000489053 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
HDAC6-232ENST00000489053 Q6ZQY7 126 aa5.1□□□□□ -1.59
HDAC6-232ENST00000489053 SNHG12Q9BXW3 62 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms