RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 ARHGAP5-AS1Q96IT6 56 aa1.5□□□□□ -2.17
KDM3A-213ENST00000488971 IAPPP10997 89 aa1.49□□□□□ -2.17
KDM3A-213ENST00000488971 TFF3Q07654 80 aa1.49□□□□□ -2.17
KDM3A-213ENST00000488971 LINC01590Q5TEZ4 76 aa1.49□□□□□ -2.17
KDM3A-213ENST00000488971 CACNA1BQ00975 2339 aa1.49□□□□□ -2.17
KDM3A-213ENST00000488971 TNRC6CQ9HCJ0 1690 aaKnown RBP1.48□□□□□ -2.17
KDM3A-213ENST00000488971 CADP27708 2225 aa1.48□□□□□ -2.17
KDM3A-213ENST00000488971 NDUFA3O95167 84 aa1.48□□□□□ -2.17
KDM3A-213ENST00000488971 DEFB114Q30KQ6 69 aa1.48□□□□□ -2.17
KDM3A-213ENST00000488971 IGIPA6NJ69 53 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 H3BSH0 61 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 I3L3M4 83 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 M0R1W7 72 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 CCL22O00626 93 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 ANGP03950 147 aaKnown RBP1.47□□□□□ -2.17
KDM3A-213ENST00000488971 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
KDM3A-213ENST00000488971 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
KDM3A-213ENST00000488971 ETDCA0A1B0GVM5 59 aa1.46□□□□□ -2.18
KDM3A-213ENST00000488971 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
KDM3A-213ENST00000488971 MRPL33O75394 65 aaKnown RBP1.45□□□□□ -2.18
KDM3A-213ENST00000488971 TECTAO75443 2155 aa1.45□□□□□ -2.18
KDM3A-213ENST00000488971 K7EIL1 84 aa1.44□□□□□ -2.18
KDM3A-213ENST00000488971 DEFB106AQ8N104 65 aa1.44□□□□□ -2.18
KDM3A-213ENST00000488971 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
KDM3A-213ENST00000488971 ASXL3Q9C0F0 2248 aa1.43□□□□□ -2.18
KDM3A-213ENST00000488971 RPS27P42677 84 aaKnown RBP1.43□□□□□ -2.18
KDM3A-213ENST00000488971 PIGYQ3MUY2 71 aa1.43□□□□□ -2.18
KDM3A-213ENST00000488971 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
KDM3A-213ENST00000488971 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
KDM3A-213ENST00000488971 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
KDM3A-213ENST00000488971 USMG5Q96IX5 58 aa1.42□□□□□ -2.18
KDM3A-213ENST00000488971 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
KDM3A-213ENST00000488971 DEFB131BA0A096LNP1 70 aa1.41□□□□□ -2.18
KDM3A-213ENST00000488971 H0YGX0 51 aa1.41□□□□□ -2.18
KDM3A-213ENST00000488971 SMIM2Q9BVW6 85 aa1.41□□□□□ -2.18
KDM3A-213ENST00000488971 TNCP24821 2201 aa1.41□□□□□ -2.18
KDM3A-213ENST00000488971 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
KDM3A-213ENST00000488971 ZDBF2Q9HCK1 2354 aa1.4□□□□□ -2.19
KDM3A-213ENST00000488971 I3L2K1 104 aa1.4□□□□□ -2.19
KDM3A-213ENST00000488971 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
KDM3A-213ENST00000488971 URB1O60287 2271 aaKnown RBP1.4□□□□□ -2.19
KDM3A-213ENST00000488971 CRIP1P50238 77 aa1.39□□□□□ -2.19
KDM3A-213ENST00000488971 COL6A6A6NMZ7 2263 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 MUC6Q6W4X9 2439 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 KNTC1P50748 2209 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 K7EQZ3 153 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 SPINK9Q5DT21 86 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 DEFB123Q8N688 67 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 LINC00308Q8TCZ7 52 aa1.38□□□□□ -2.19
KDM3A-213ENST00000488971 MRPL34Q9BQ48 92 aaKnown RBP1.38□□□□□ -2.19
KDM3A-213ENST00000488971 AHCTF1Q8WYP5 2266 aa1.37□□□□□ -2.19
KDM3A-213ENST00000488971 NDUFA1O15239 70 aa1.37□□□□□ -2.19
KDM3A-213ENST00000488971 Q6ZSA8 131 aa1.37□□□□□ -2.19
KDM3A-213ENST00000488971 BPTFQ12830 3046 aa1.37□□□□□ -2.19
KDM3A-213ENST00000488971 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
KDM3A-213ENST00000488971 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
KDM3A-213ENST00000488971 NAV3Q8IVL0 2385 aa1.36□□□□□ -2.19
KDM3A-213ENST00000488971 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
KDM3A-213ENST00000488971 PRCDQ00LT1 54 aa1.35□□□□□ -2.19
KDM3A-213ENST00000488971 JMJD1CQ15652 2540 aa1.34□□□□□ -2.19
KDM3A-213ENST00000488971 GOLGA4Q13439 2230 aaKnown RBP1.34□□□□□ -2.19
KDM3A-213ENST00000488971 POLR2KP53803 58 aaKnown RBP1.34□□□□□ -2.19
KDM3A-213ENST00000488971 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
KDM3A-213ENST00000488971 RPL39LQ96EH5 51 aaKnown RBP1.34□□□□□ -2.19
KDM3A-213ENST00000488971 CDKN2A-AS1Q9UH64 79 aa1.34□□□□□ -2.19
KDM3A-213ENST00000488971 CACNA1EQ15878 2313 aa1.33□□□□□ -2.2
KDM3A-213ENST00000488971 FAM208BQ5VWN6 2430 aa1.33□□□□□ -2.2
KDM3A-213ENST00000488971 RPL39P62891 51 aaKnown RBP1.33□□□□□ -2.2
KDM3A-213ENST00000488971 Q8IZM0 81 aa1.33□□□□□ -2.2
KDM3A-213ENST00000488971 LINC00158P58513 81 aa1.32□□□□□ -2.2
KDM3A-213ENST00000488971 COX6A2Q02221 97 aa1.32□□□□□ -2.2
KDM3A-213ENST00000488971 PRO3102Q9H379 93 aa1.32□□□□□ -2.2
KDM3A-213ENST00000488971 OTOGLQ3ZCN5 2332 aa1.32□□□□□ -2.2
KDM3A-213ENST00000488971 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
KDM3A-213ENST00000488971 LEAP2Q969E1 77 aa1.31□□□□□ -2.2
KDM3A-213ENST00000488971 C10orf95Q9H7T3 257 aa1.31□□□□□ -2.2
KDM3A-213ENST00000488971 ROS1P08922 2347 aa1.31□□□□□ -2.2
KDM3A-213ENST00000488971 STATHP02808 62 aa1.3□□□□□ -2.2
KDM3A-213ENST00000488971 WT1-ASQ06250 92 aa1.29□□□□□ -2.2
KDM3A-213ENST00000488971 TMEM167AQ8TBQ9 72 aa1.29□□□□□ -2.2
KDM3A-213ENST00000488971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.29□□□□□ -2.22e-7■■■■□ 20.2
KDM3A-213ENST00000488971 CNOT1A5YKK6 2376 aaKnown RBP1.28□□□□□ -2.2
KDM3A-213ENST00000488971 RPL39P5Q59GN2 51 aa1.28□□□□□ -2.2
KDM3A-213ENST00000488971 DEFB108AA8MXU0 73 aa1.27□□□□□ -2.21
KDM3A-213ENST00000488971 LYNX1G3V0Z9 82 aa1.27□□□□□ -2.21
KDM3A-213ENST00000488971 M0QY20 66 aa1.27□□□□□ -2.21
KDM3A-213ENST00000488971 MINOS1Q5TGZ0 78 aa1.27□□□□□ -2.21
KDM3A-213ENST00000488971 H0YAA0 97 aa1.26□□□□□ -2.21
KDM3A-213ENST00000488971 SPRR1AP35321 89 aa1.26□□□□□ -2.21
KDM3A-213ENST00000488971 Q5VSD8 79 aa1.26□□□□□ -2.21
KDM3A-213ENST00000488971 APLNQ9ULZ1 77 aa1.26□□□□□ -2.21
KDM3A-213ENST00000488971 A0A0D9SG42 100 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
KDM3A-213ENST00000488971 LELP1Q5T871 98 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 DEFB105AQ8NG35 78 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 DEFB104AQ8WTQ1 72 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 DOPEY2Q9Y3R5 2298 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 PIEZO2Q9H5I5 2752 aa1.25□□□□□ -2.21
KDM3A-213ENST00000488971 H0YGG7 62 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms