RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 Q6ZRX8 168 aa10.11□□□□□ -0.79
ATG3-205ENST00000488910 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
ATG3-205ENST00000488910 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
ATG3-205ENST00000488910 C20orf202A1L168 122 aa10.1□□□□□ -0.79
ATG3-205ENST00000488910 JOSD1Q15040 202 aaPredicted RBP10.1□□□□□ -0.79
ATG3-205ENST00000488910 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
ATG3-205ENST00000488910 SPANXCQ9NY87 97 aa10.1□□□□□ -0.79
ATG3-205ENST00000488910 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
ATG3-205ENST00000488910 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
ATG3-205ENST00000488910 ERC2-IT1O76042 136 aa10.08□□□□□ -0.8
ATG3-205ENST00000488910 AKR1D1P51857 326 aa10.08□□□□□ -0.8
ATG3-205ENST00000488910 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
ATG3-205ENST00000488910 Q9BRP9 147 aa10.08□□□□□ -0.8
ATG3-205ENST00000488910 HINT1P49773 126 aaPredicted RBP10.07□□□□□ -0.8
ATG3-205ENST00000488910 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
ATG3-205ENST00000488910 TTTY13Q9BZ97 58 aa10.06□□□□□ -0.8
ATG3-205ENST00000488910 LINC00518Q8N0U6 118 aa10.05□□□□□ -0.8
ATG3-205ENST00000488910 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
ATG3-205ENST00000488910 Q8NBF4 154 aa10.04□□□□□ -0.8
ATG3-205ENST00000488910 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
ATG3-205ENST00000488910 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
ATG3-205ENST00000488910 S100A1P23297 94 aa10.03□□□□□ -0.8
ATG3-205ENST00000488910 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
ATG3-205ENST00000488910 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
ATG3-205ENST00000488910 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.81
ATG3-205ENST00000488910 COPS9Q8WXC6 57 aa10.02□□□□□ -0.81
ATG3-205ENST00000488910 SPINK1P00995 79 aa10.01□□□□□ -0.81
ATG3-205ENST00000488910 ANKRD39Q53RE8 183 aa10.01□□□□□ -0.81
ATG3-205ENST00000488910 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
ATG3-205ENST00000488910 SNRPEP62304 92 aaKnown RBP10□□□□□ -0.81
ATG3-205ENST00000488910 IGLV9-49A0A0B4J1Y8 123 aa9.99□□□□□ -0.81
ATG3-205ENST00000488910 IFITM1P13164 125 aa9.99□□□□□ -0.81
ATG3-205ENST00000488910 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
ATG3-205ENST00000488910 Q6ZVH6 145 aa9.99□□□□□ -0.81
ATG3-205ENST00000488910 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
ATG3-205ENST00000488910 MOBPQ13875 183 aa9.98□□□□□ -0.81
ATG3-205ENST00000488910 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
ATG3-205ENST00000488910 FP248Q71RG6 208 aaPredicted RBP9.97□□□□□ -0.81
ATG3-205ENST00000488910 S100A2P29034 98 aa9.96□□□□□ -0.82
ATG3-205ENST00000488910 PCP2Q8IVA1 136 aa9.96□□□□□ -0.82
ATG3-205ENST00000488910 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.82
ATG3-205ENST00000488910 RPS29P62273 56 aaKnown RBP9.95□□□□□ -0.82
ATG3-205ENST00000488910 ST20-AS1Q8NBB2 130 aa9.95□□□□□ -0.82
ATG3-205ENST00000488910 HIST1H2BLQ99880 126 aa9.95□□□□□ -0.82
ATG3-205ENST00000488910 CDIP1Q9H305 208 aa9.94□□□□□ -0.82
ATG3-205ENST00000488910 MUC2Q02817 5179 aa9.94□□□□□ -0.82
ATG3-205ENST00000488910 COX7BP24311 80 aa9.93□□□□□ -0.82
ATG3-205ENST00000488910 ELOF1P60002 83 aaKnown RBP9.93□□□□□ -0.82
ATG3-205ENST00000488910 C6orf99Q4VX62 202 aa9.93□□□□□ -0.82
ATG3-205ENST00000488910 TRBV7-6A0A0J9YX20 115 aa9.92□□□□□ -0.82
ATG3-205ENST00000488910 S100A6P06703 90 aa9.92□□□□□ -0.82
ATG3-205ENST00000488910 SPRR1BP22528 89 aa9.92□□□□□ -0.82
ATG3-205ENST00000488910 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
ATG3-205ENST00000488910 MUSTN1Q8IVN3 82 aa9.92□□□□□ -0.82
ATG3-205ENST00000488910 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
ATG3-205ENST00000488910 HSBP1L1C9JCN9 74 aa9.9□□□□□ -0.82
ATG3-205ENST00000488910 A6NDN8 102 aa9.89□□□□□ -0.83
ATG3-205ENST00000488910 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
ATG3-205ENST00000488910 A0A1B0GWB2 263 aa9.87□□□□□ -0.83
ATG3-205ENST00000488910 SLC25A20O43772 301 aa9.87□□□□□ -0.83
ATG3-205ENST00000488910 Q8N377 158 aa9.87□□□□□ -0.83
ATG3-205ENST00000488910 LAMTOR3Q9UHA4 124 aa9.87□□□□□ -0.83
ATG3-205ENST00000488910 TAL2Q16559 108 aa9.85□□□□□ -0.83
ATG3-205ENST00000488910 A0A0U1RQV1 116 aa9.84□□□□□ -0.83
ATG3-205ENST00000488910 A4D1N5 150 aa9.84□□□□□ -0.83
ATG3-205ENST00000488910 TEX49A0A1B0GTD5 131 aa9.83□□□□□ -0.84
ATG3-205ENST00000488910 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
ATG3-205ENST00000488910 MUC17Q685J3 4493 aa9.83□□□□□ -0.84
ATG3-205ENST00000488910 DEFB105AQ8NG35 78 aa9.81□□□□□ -0.84
ATG3-205ENST00000488910 SMIM11BQ8TCY0 68 aa9.81□□□□□ -0.84
ATG3-205ENST00000488910 SCGB1D1O95968 90 aa9.8□□□□□ -0.84
ATG3-205ENST00000488910 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
ATG3-205ENST00000488910 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
ATG3-205ENST00000488910 VAMP3Q15836 100 aa9.77□□□□□ -0.85
ATG3-205ENST00000488910 Q1RN00 199 aa9.77□□□□□ -0.85
ATG3-205ENST00000488910 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
ATG3-205ENST00000488910 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
ATG3-205ENST00000488910 LINC01547P58512 204 aaPredicted RBP9.76□□□□□ -0.85
ATG3-205ENST00000488910 CD164Q04900 197 aa9.76□□□□□ -0.85
ATG3-205ENST00000488910 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
ATG3-205ENST00000488910 COX8AP10176 69 aa9.74□□□□□ -0.85
ATG3-205ENST00000488910 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
ATG3-205ENST00000488910 DLEU1O43261 78 aa9.72□□□□□ -0.85
ATG3-205ENST00000488910 HIST1H4GQ99525 98 aa9.72□□□□□ -0.85
ATG3-205ENST00000488910 H7C2G1 150 aa9.71□□□□□ -0.86
ATG3-205ENST00000488910 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.86
ATG3-205ENST00000488910 LINC00575Q6W349 94 aa9.71□□□□□ -0.86
ATG3-205ENST00000488910 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
ATG3-205ENST00000488910 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
ATG3-205ENST00000488910 hADV29S1A0JD25 119 aa9.68□□□□□ -0.86
ATG3-205ENST00000488910 Q5XG85 94 aa9.68□□□□□ -0.86
ATG3-205ENST00000488910 XP32Q5T750 250 aa9.66□□□□□ -0.86
ATG3-205ENST00000488910 BVES-AS1Q5T3Y7 98 aa9.65□□□□□ -0.86
ATG3-205ENST00000488910 C14orf144Q96I85 54 aa9.65□□□□□ -0.86
ATG3-205ENST00000488910 C12orf57Q99622 126 aa9.65□□□□□ -0.86
ATG3-205ENST00000488910 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
ATG3-205ENST00000488910 PAM16Q9Y3D7 125 aa9.64□□□□□ -0.87
ATG3-205ENST00000488910 F8WEM9 126 aa9.63□□□□□ -0.87
ATG3-205ENST00000488910 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
ATG3-205ENST00000488910 Q6ZQY7 126 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms