RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MRPL55Q7Z7F7 128 aaKnown RBP6□□□□□ -1.45
SF3B1-211ENST00000487698 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
SF3B1-211ENST00000487698 ELOF1P60002 83 aaKnown RBP5.99□□□□□ -1.45
SF3B1-211ENST00000487698 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
SF3B1-211ENST00000487698 DNAL4O96015 105 aa5.99□□□□□ -1.45
SF3B1-211ENST00000487698 PRYO14603 147 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 RTL8CO15255 209 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 RPL37AP8A6NKH3 93 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 COX7BP24311 80 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 SPRR1AP35321 89 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 TNP2Q05952 138 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 LINC00474Q9P2X8 69 aa5.98□□□□□ -1.45
SF3B1-211ENST00000487698 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-211ENST00000487698 PANO1I0J062 215 aa5.97□□□□□ -1.45
SF3B1-211ENST00000487698 LINC00528Q8N1L1 170 aa5.97□□□□□ -1.45
SF3B1-211ENST00000487698 K7ERU9 68 aa5.96□□□□□ -1.45
SF3B1-211ENST00000487698 PPDPFLQ8WWR9 84 aa5.96□□□□□ -1.45
SF3B1-211ENST00000487698 hADV29S1A0JD25 119 aa5.96□□□□□ -1.46
SF3B1-211ENST00000487698 FUSP35637 526 aaKnown RBP eCLIP5.96□□□□□ -1.46
SF3B1-211ENST00000487698 SPACA4Q8TDM5 124 aa5.96□□□□□ -1.46
SF3B1-211ENST00000487698 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.46
SF3B1-211ENST00000487698 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
SF3B1-211ENST00000487698 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
SF3B1-211ENST00000487698 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
SF3B1-211ENST00000487698 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-211ENST00000487698 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
SF3B1-211ENST00000487698 TEX49A0A1B0GTD5 131 aa5.95□□□□□ -1.46
SF3B1-211ENST00000487698 SNCGO76070 127 aa5.95□□□□□ -1.46
SF3B1-211ENST00000487698 IGLV5-52A0A0A0MRZ9 124 aa5.94□□□□□ -1.46
SF3B1-211ENST00000487698 B5MCH6 92 aa5.93□□□□□ -1.46
SF3B1-211ENST00000487698 Q6ZRX8 168 aa5.93□□□□□ -1.46
SF3B1-211ENST00000487698 LCE6AA0A183 80 aa5.93□□□□□ -1.46
SF3B1-211ENST00000487698 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
SF3B1-211ENST00000487698 Q6ZQY7 126 aa5.93□□□□□ -1.46
SF3B1-211ENST00000487698 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
SF3B1-211ENST00000487698 INAFM2P0DMQ5 153 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-211ENST00000487698 KRTAP11-1Q8IUC1 163 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 PKD1P98161 4303 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 ETDCA0A1B0GVM5 59 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 J3QR89 54 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
SF3B1-211ENST00000487698 TMEM256-PLSCR3K7ERE1 68 aa5.91□□□□□ -1.46
SF3B1-211ENST00000487698 Q9BRP9 147 aa5.91□□□□□ -1.46
SF3B1-211ENST00000487698 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
SF3B1-211ENST00000487698 H3BQ85 93 aa5.89□□□□□ -1.47
SF3B1-211ENST00000487698 UBE2BP63146 152 aa5.89□□□□□ -1.47
SF3B1-211ENST00000487698 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
SF3B1-211ENST00000487698 DPH3Q96FX2 82 aa5.88□□□□□ -1.47
SF3B1-211ENST00000487698 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
SF3B1-211ENST00000487698 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
SF3B1-211ENST00000487698 RYR2Q92736 4967 aa5.87□□□□□ -1.47
SF3B1-211ENST00000487698 GHRHP01286 108 aa5.87□□□□□ -1.47
SF3B1-211ENST00000487698 JMJD7-PLA2G4BH0Y9G9 81 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 H0Y9J4 135 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-211ENST00000487698 FAM19A1Q7Z5A9 133 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 PRLHP81277 87 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
SF3B1-211ENST00000487698 IGLV5-48A0A075B6I7 105 aa5.85□□□□□ -1.47
SF3B1-211ENST00000487698 FAM240AA0A1B0GVK7 77 aa5.85□□□□□ -1.47
SF3B1-211ENST00000487698 Q6ZSA8 131 aa5.85□□□□□ -1.47
SF3B1-211ENST00000487698 BCE1O60756 84 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
SF3B1-211ENST00000487698 LINC00336Q6ZUF6 198 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 Q8N377 158 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
SF3B1-211ENST00000487698 A0A1B0GV72 72 aa5.83□□□□□ -1.48
SF3B1-211ENST00000487698 KRTAP10-1P60331 282 aa5.83□□□□□ -1.48
SF3B1-211ENST00000487698 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
SF3B1-211ENST00000487698 VPS25Q9BRG1 176 aa5.83□□□□□ -1.48
SF3B1-211ENST00000487698 LAMTOR3Q9UHA4 124 aa5.83□□□□□ -1.48
SF3B1-211ENST00000487698 NDUFV3P56181 108 aaKnown RBP5.83□□□□□ -1.48
SF3B1-211ENST00000487698 RBM3P98179 157 aaKnown RBP5.82□□□□□ -1.48
SF3B1-211ENST00000487698 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
SF3B1-211ENST00000487698 LOC110117498A0A087WWA1 95 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 PSORS1C2Q9UIG4 136 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 UBE2AP49459 152 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 DEFB105AQ8NG35 78 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 CIRBP-AS1Q8TBR5 109 aa5.81□□□□□ -1.48
SF3B1-211ENST00000487698 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
SF3B1-211ENST00000487698 ACYP1P07311 99 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 Q6ZQT0 140 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 CCKP06307 115 aa5.8□□□□□ -1.48
SF3B1-211ENST00000487698 SMIM29Q86T20 159 aa5.78□□□□□ -1.48
SF3B1-211ENST00000487698 C3orf22Q8N5N4 141 aa5.78□□□□□ -1.48
SF3B1-211ENST00000487698 PDE6GP18545 87 aa5.78□□□□□ -1.48
SF3B1-211ENST00000487698 DSCR8Q96T75 97 aa5.78□□□□□ -1.48
SF3B1-211ENST00000487698 SPRR1BP22528 89 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms