RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 C15orf56Q8N910 161 aa9.72□□□□□ -0.85
EPHB4-206ENST00000487222 UTRNP46939 3433 aa9.71□□□□□ -0.86
EPHB4-206ENST00000487222 Q8N377 158 aa9.7□□□□□ -0.86
EPHB4-206ENST00000487222 COA5Q86WW8 74 aa9.69□□□□□ -0.86
EPHB4-206ENST00000487222 CYP4F30PQ9H0H9 118 aa9.69□□□□□ -0.86
EPHB4-206ENST00000487222 A8MUN3 132 aa9.69□□□□□ -0.86
EPHB4-206ENST00000487222 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
EPHB4-206ENST00000487222 C9orf129Q5T035 196 aaKnown RBP9.67□□□□□ -0.86
EPHB4-206ENST00000487222 BPTFQ12830 3046 aa9.66□□□□□ -0.86
EPHB4-206ENST00000487222 CHD7Q9P2D1 2997 aa9.65□□□□□ -0.86
EPHB4-206ENST00000487222 MAST4O15021 2626 aa9.65□□□□□ -0.86
EPHB4-206ENST00000487222 Q96NJ1 140 aa9.65□□□□□ -0.86
EPHB4-206ENST00000487222 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
EPHB4-206ENST00000487222 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.86
EPHB4-206ENST00000487222 H7BZZ5 65 aa9.65□□□□□ -0.87
EPHB4-206ENST00000487222 PLA2G2DQ9UNK4 145 aa9.65□□□□□ -0.87
EPHB4-206ENST00000487222 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
EPHB4-206ENST00000487222 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
EPHB4-206ENST00000487222 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
EPHB4-206ENST00000487222 ATRQ13535 2644 aa9.64□□□□□ -0.87
EPHB4-206ENST00000487222 IGLV8-61A0A075B6I0 122 aa9.63□□□□□ -0.87
EPHB4-206ENST00000487222 K7EIL1 84 aa9.63□□□□□ -0.87
EPHB4-206ENST00000487222 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
EPHB4-206ENST00000487222 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
EPHB4-206ENST00000487222 HELZ2Q9BYK8 2649 aaKnown RBP9.59□□□□□ -0.87
EPHB4-206ENST00000487222 A0A1B0GVX0 72 aa9.59□□□□□ -0.87
EPHB4-206ENST00000487222 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.87
EPHB4-206ENST00000487222 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
EPHB4-206ENST00000487222 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
EPHB4-206ENST00000487222 UQCR11O14957 56 aa9.58□□□□□ -0.88
EPHB4-206ENST00000487222 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
EPHB4-206ENST00000487222 KRTAP1-3Q8IUG1 177 aa9.58□□□□□ -0.88
EPHB4-206ENST00000487222 ZNF861PO60384 105 aa9.57□□□□□ -0.88
EPHB4-206ENST00000487222 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
EPHB4-206ENST00000487222 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
EPHB4-206ENST00000487222 CENPEQ02224 2701 aa9.55□□□□□ -0.88
EPHB4-206ENST00000487222 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
EPHB4-206ENST00000487222 A0A1W2PNN7 141 aa9.55□□□□□ -0.88
EPHB4-206ENST00000487222 A0A1W2PNM2 257 aa9.55□□□□□ -0.88
EPHB4-206ENST00000487222 DSCR10P59022 87 aa9.54□□□□□ -0.88
EPHB4-206ENST00000487222 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
EPHB4-206ENST00000487222 KRTAP1-1Q07627 177 aa9.52□□□□□ -0.88
EPHB4-206ENST00000487222 CFAP46Q8IYW2 2715 aa9.51□□□□□ -0.89
EPHB4-206ENST00000487222 IGLV5-48A0A075B6I7 105 aa9.5□□□□□ -0.89
EPHB4-206ENST00000487222 A0A087WTM6 91 aa9.5□□□□□ -0.89
EPHB4-206ENST00000487222 CHD9Q3L8U1 2897 aa9.49□□□□□ -0.89
EPHB4-206ENST00000487222 PCNTO95613 3336 aa9.49□□□□□ -0.89
EPHB4-206ENST00000487222 C5orf42Q9H799 3197 aa9.49□□□□□ -0.89
EPHB4-206ENST00000487222 CNBPP62633 177 aaKnown RBP9.47□□□□□ -0.89
EPHB4-206ENST00000487222 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
EPHB4-206ENST00000487222 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
EPHB4-206ENST00000487222 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
EPHB4-206ENST00000487222 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
EPHB4-206ENST00000487222 WIPF1O43516 503 aa9.45□□□□□ -0.9
EPHB4-206ENST00000487222 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
EPHB4-206ENST00000487222 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
EPHB4-206ENST00000487222 RANBP2P49792 3224 aaKnown RBP9.43□□□□□ -0.9
EPHB4-206ENST00000487222 CD164Q04900 197 aa9.43□□□□□ -0.9
EPHB4-206ENST00000487222 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
EPHB4-206ENST00000487222 ANAPC11Q9NYG5 84 aa9.42□□□□□ -0.9
EPHB4-206ENST00000487222 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
EPHB4-206ENST00000487222 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
EPHB4-206ENST00000487222 PSORS1C2Q9UIG4 136 aa9.42□□□□□ -0.9
EPHB4-206ENST00000487222 OCR1Q9BZK8 76 aa9.4□□□□□ -0.9
EPHB4-206ENST00000487222 HTTP42858 3142 aa9.4□□□□□ -0.9
EPHB4-206ENST00000487222 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
EPHB4-206ENST00000487222 KTN1-AS1Q86SY8 53 aa9.36□□□□□ -0.91
EPHB4-206ENST00000487222 ZNF292O60281 2723 aa9.34□□□□□ -0.91
EPHB4-206ENST00000487222 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
EPHB4-206ENST00000487222 AKAP13Q12802 2813 aa9.33□□□□□ -0.92
EPHB4-206ENST00000487222 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
EPHB4-206ENST00000487222 CR1P17927 2039 aa9.32□□□□□ -0.92
EPHB4-206ENST00000487222 CDC42SE1Q9NRR8 79 aa9.31□□□□□ -0.92
EPHB4-206ENST00000487222 TRANK1O15050 2925 aa9.3□□□□□ -0.92
EPHB4-206ENST00000487222 LCA10Q71F78 164 aa9.3□□□□□ -0.92
EPHB4-206ENST00000487222 Q1T7F1 81 aa9.29□□□□□ -0.92
EPHB4-206ENST00000487222 MGAQ8IWI9 3026 aa9.28□□□□□ -0.92
EPHB4-206ENST00000487222 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
EPHB4-206ENST00000487222 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
EPHB4-206ENST00000487222 Q5XG85 94 aa9.25□□□□□ -0.93
EPHB4-206ENST00000487222 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
EPHB4-206ENST00000487222 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
EPHB4-206ENST00000487222 TEP1Q99973 2627 aaKnown RBP9.24□□□□□ -0.93
EPHB4-206ENST00000487222 Q8N1X5 172 aa9.24□□□□□ -0.93
EPHB4-206ENST00000487222 J3QL48 77 aa9.23□□□□□ -0.93
EPHB4-206ENST00000487222 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
EPHB4-206ENST00000487222 CFAP54Q96N23 3096 aa9.22□□□□□ -0.93
EPHB4-206ENST00000487222 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
EPHB4-206ENST00000487222 LAMA3Q16787 3333 aa9.21□□□□□ -0.94
EPHB4-206ENST00000487222 TEX15Q9BXT5 2789 aa9.2□□□□□ -0.94
EPHB4-206ENST00000487222 Q8NDZ9 215 aa9.19□□□□□ -0.94
EPHB4-206ENST00000487222 CYSTM1Q9H1C7 97 aa9.19□□□□□ -0.94
EPHB4-206ENST00000487222 SPRR1AP35321 89 aa9.18□□□□□ -0.94
EPHB4-206ENST00000487222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.15□□□□□ -0.94
EPHB4-206ENST00000487222 RBM12B-AS1Q9P1G2 102 aa9.15□□□□□ -0.94
EPHB4-206ENST00000487222 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.94
EPHB4-206ENST00000487222 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
EPHB4-206ENST00000487222 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
EPHB4-206ENST00000487222 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
EPHB4-206ENST00000487222 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms