RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 CDIP1Q9H305 208 aa10.9□□□□□ -0.66
CLIP2-206ENST00000487091 TRAV23DV6A0A075B6W5 121 aa10.89□□□□□ -0.67
CLIP2-206ENST00000487091 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
CLIP2-206ENST00000487091 LINC01545Q5VT33 79 aa10.89□□□□□ -0.67
CLIP2-206ENST00000487091 PET117Q6UWS5 81 aa10.89□□□□□ -0.67
CLIP2-206ENST00000487091 FP248Q71RG6 208 aaPredicted RBP10.89□□□□□ -0.67
CLIP2-206ENST00000487091 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
CLIP2-206ENST00000487091 SPINK1P00995 79 aa10.88□□□□□ -0.67
CLIP2-206ENST00000487091 NPC2P61916 151 aa10.88□□□□□ -0.67
CLIP2-206ENST00000487091 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
CLIP2-206ENST00000487091 SSBP3-AS1Q7Z2R9 100 aa10.87□□□□□ -0.67
CLIP2-206ENST00000487091 CBY1Q9Y3M2 126 aa10.87□□□□□ -0.67
CLIP2-206ENST00000487091 TIMM17BO60830 172 aa10.86□□□□□ -0.67
CLIP2-206ENST00000487091 LITAFQ99732 161 aa10.86□□□□□ -0.67
CLIP2-206ENST00000487091 ZNF73O43830 326 aaPredicted RBP10.85□□□□□ -0.67
CLIP2-206ENST00000487091 MOBPQ13875 183 aa10.84□□□□□ -0.67
CLIP2-206ENST00000487091 LINC00308Q8TCZ7 52 aa10.84□□□□□ -0.67
CLIP2-206ENST00000487091 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
CLIP2-206ENST00000487091 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
CLIP2-206ENST00000487091 HINT1P49773 126 aaPredicted RBP10.82□□□□□ -0.68
CLIP2-206ENST00000487091 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
CLIP2-206ENST00000487091 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
CLIP2-206ENST00000487091 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
CLIP2-206ENST00000487091 C3orf79P0CE67 100 aa10.81□□□□□ -0.68
CLIP2-206ENST00000487091 RPS29P62273 56 aaKnown RBP10.81□□□□□ -0.68
CLIP2-206ENST00000487091 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
CLIP2-206ENST00000487091 SPANXDQ9BXN6 97 aa10.77□□□□□ -0.69
CLIP2-206ENST00000487091 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.69
CLIP2-206ENST00000487091 KRTDAPP60985 99 aa10.76□□□□□ -0.69
CLIP2-206ENST00000487091 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
CLIP2-206ENST00000487091 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
CLIP2-206ENST00000487091 ST20-AS1Q8NBB2 130 aa10.76□□□□□ -0.69
CLIP2-206ENST00000487091 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
CLIP2-206ENST00000487091 Q8N377 158 aa10.75□□□□□ -0.69
CLIP2-206ENST00000487091 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
CLIP2-206ENST00000487091 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
CLIP2-206ENST00000487091 C20orf202A1L168 122 aa10.73□□□□□ -0.69
CLIP2-206ENST00000487091 SLC25A20O43772 301 aa10.73□□□□□ -0.69
CLIP2-206ENST00000487091 SPRR1BP22528 89 aa10.72□□□□□ -0.69
CLIP2-206ENST00000487091 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.69
CLIP2-206ENST00000487091 SLC25A34Q6PIV7 304 aa10.7□□□□□ -0.7
CLIP2-206ENST00000487091 COPS9Q8WXC6 57 aa10.7□□□□□ -0.7
CLIP2-206ENST00000487091 AKR1D1P51857 326 aa10.69□□□□□ -0.7
CLIP2-206ENST00000487091 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
CLIP2-206ENST00000487091 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
CLIP2-206ENST00000487091 IFITM1P13164 125 aa10.68□□□□□ -0.7
CLIP2-206ENST00000487091 COX7BP24311 80 aa10.68□□□□□ -0.7
CLIP2-206ENST00000487091 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
CLIP2-206ENST00000487091 FAT4Q6V0I7 4981 aa10.67□□□□□ -0.7
CLIP2-206ENST00000487091 Q6ZVH6 145 aa10.67□□□□□ -0.7
CLIP2-206ENST00000487091 ASB16-AS1Q495Z4 193 aa10.66□□□□□ -0.7
CLIP2-206ENST00000487091 LCE2AQ5TA79 106 aaPredicted RBP10.66□□□□□ -0.7
CLIP2-206ENST00000487091 TRBV7-6A0A0J9YX20 115 aa10.65□□□□□ -0.7
CLIP2-206ENST00000487091 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
CLIP2-206ENST00000487091 LAMTOR3Q9UHA4 124 aa10.65□□□□□ -0.7
CLIP2-206ENST00000487091 SNRPEP62304 92 aaKnown RBP10.62□□□□□ -0.71
CLIP2-206ENST00000487091 PCP2Q8IVA1 136 aa10.62□□□□□ -0.71
CLIP2-206ENST00000487091 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
CLIP2-206ENST00000487091 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
CLIP2-206ENST00000487091 TAL2Q16559 108 aa10.61□□□□□ -0.71
CLIP2-206ENST00000487091 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
CLIP2-206ENST00000487091 A6NDN8 102 aa10.6□□□□□ -0.71
CLIP2-206ENST00000487091 LIMD2Q9BT23 127 aa10.6□□□□□ -0.71
CLIP2-206ENST00000487091 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
CLIP2-206ENST00000487091 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
CLIP2-206ENST00000487091 XP32Q5T750 250 aa10.57□□□□□ -0.72
CLIP2-206ENST00000487091 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CLIP2-206ENST00000487091 A4D1N5 150 aa10.56□□□□□ -0.72
CLIP2-206ENST00000487091 CD164Q04900 197 aa10.56□□□□□ -0.72
CLIP2-206ENST00000487091 Q1RN00 199 aa10.56□□□□□ -0.72
CLIP2-206ENST00000487091 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
CLIP2-206ENST00000487091 PRO1933Q9H354 126 aa10.55□□□□□ -0.72
CLIP2-206ENST00000487091 IGLV5-48A0A075B6I7 105 aa10.54□□□□□ -0.72
CLIP2-206ENST00000487091 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
CLIP2-206ENST00000487091 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
CLIP2-206ENST00000487091 SMIM29Q86T20 159 aa10.53□□□□□ -0.72
CLIP2-206ENST00000487091 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
CLIP2-206ENST00000487091 S100A2P29034 98 aa10.52□□□□□ -0.73
CLIP2-206ENST00000487091 SMIM11BQ8TCY0 68 aa10.52□□□□□ -0.73
CLIP2-206ENST00000487091 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
CLIP2-206ENST00000487091 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
CLIP2-206ENST00000487091 H7C2G1 150 aa10.5□□□□□ -0.73
CLIP2-206ENST00000487091 HSBP1L1C9JCN9 74 aa10.49□□□□□ -0.73
CLIP2-206ENST00000487091 Q5XG85 94 aa10.48□□□□□ -0.73
CLIP2-206ENST00000487091 S100A1P23297 94 aa10.47□□□□□ -0.73
CLIP2-206ENST00000487091 VAMP3Q15836 100 aa10.46□□□□□ -0.73
CLIP2-206ENST00000487091 S100A6P06703 90 aa10.44□□□□□ -0.74
CLIP2-206ENST00000487091 KRTAP9-2Q9BYQ4 174 aa10.44□□□□□ -0.74
CLIP2-206ENST00000487091 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
CLIP2-206ENST00000487091 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
CLIP2-206ENST00000487091 C9orf92A6NGG3 77 aa10.4□□□□□ -0.74
CLIP2-206ENST00000487091 C1orf195Q5TG92 126 aa10.4□□□□□ -0.74
CLIP2-206ENST00000487091 hADV29S1A0JD25 119 aa10.38□□□□□ -0.75
CLIP2-206ENST00000487091 F8WEM9 126 aa10.37□□□□□ -0.75
CLIP2-206ENST00000487091 SCGB1D1O95968 90 aa10.36□□□□□ -0.75
CLIP2-206ENST00000487091 Q6ZQY7 126 aa10.36□□□□□ -0.75
CLIP2-206ENST00000487091 PCOTHQ58A44 107 aa10.35□□□□□ -0.75
CLIP2-206ENST00000487091 TCL1BO95988 128 aa10.34□□□□□ -0.75
CLIP2-206ENST00000487091 COX8AP10176 69 aa10.34□□□□□ -0.75
CLIP2-206ENST00000487091 HIST1H4GQ99525 98 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms