RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 K7EQZ3 153 aa2.35□□□□□ -2.03
LMBR1-218ENST00000486837 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
LMBR1-218ENST00000486837 PRO3102Q9H379 93 aa2.35□□□□□ -2.03
LMBR1-218ENST00000486837 Q9Y3F1 56 aa2.35□□□□□ -2.03
LMBR1-218ENST00000486837 TRGV1A0A0A0MS02 117 aa2.34□□□□□ -2.03
LMBR1-218ENST00000486837 A0A1B0GU69 56 aa2.34□□□□□ -2.03
LMBR1-218ENST00000486837 APELAP0DMC3 54 aa2.34□□□□□ -2.03
LMBR1-218ENST00000486837 PATE1Q8WXA2 126 aa2.32□□□□□ -2.04
LMBR1-218ENST00000486837 TOMM7Q9P0U1 55 aa2.32□□□□□ -2.04
LMBR1-218ENST00000486837 KAAG1Q9UBP8 84 aa2.32□□□□□ -2.04
LMBR1-218ENST00000486837 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
LMBR1-218ENST00000486837 SDK1Q7Z5N4 2213 aa2.3□□□□□ -2.04
LMBR1-218ENST00000486837 PTPRQQ9UMZ3 2332 aa2.3□□□□□ -2.04
LMBR1-218ENST00000486837 TP53AIP1Q9HCN2 124 aa2.3□□□□□ -2.04
LMBR1-218ENST00000486837 NAV3Q8IVL0 2385 aa2.29□□□□□ -2.04
LMBR1-218ENST00000486837 A0A0G2JQZ4 141 aa2.29□□□□□ -2.04
LMBR1-218ENST00000486837 ANGP03950 147 aaKnown RBP2.29□□□□□ -2.04
LMBR1-218ENST00000486837 ACYP2P14621 99 aa2.29□□□□□ -2.04
LMBR1-218ENST00000486837 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
LMBR1-218ENST00000486837 MED13LQ71F56 2210 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 SORL1Q92673 2214 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 A8MTW9 85 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 PCOTHQ58A44 107 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 DEFB132Q7Z7B7 95 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 Q96NJ1 140 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 CCL19Q99731 98 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 HIVEP2P31629 2446 aa2.28□□□□□ -2.04
LMBR1-218ENST00000486837 BRWD1Q9NSI6 2320 aa2.27□□□□□ -2.05
LMBR1-218ENST00000486837 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
LMBR1-218ENST00000486837 LYNX1G3V0Z9 82 aa2.27□□□□□ -2.05
LMBR1-218ENST00000486837 MINOS1Q5TGZ0 78 aa2.27□□□□□ -2.05
LMBR1-218ENST00000486837 WFDC10BQ8IUB3 73 aa2.27□□□□□ -2.05
LMBR1-218ENST00000486837 DEFB1P60022 68 aa2.26□□□□□ -2.05
LMBR1-218ENST00000486837 DEFB108BQ8NET1 73 aa2.26□□□□□ -2.05
LMBR1-218ENST00000486837 PLCE1Q9P212 2302 aa2.26□□□□□ -2.05
LMBR1-218ENST00000486837 CNTRLQ7Z7A1 2325 aa2.25□□□□□ -2.05
LMBR1-218ENST00000486837 SPACA4Q8TDM5 124 aa2.25□□□□□ -2.05
LMBR1-218ENST00000486837 URB1O60287 2271 aaKnown RBP2.25□□□□□ -2.05
LMBR1-218ENST00000486837 ABCA4P78363 2273 aa2.25□□□□□ -2.05
LMBR1-218ENST00000486837 A0A0C4DFX4 3053 aa2.24□□□□□ -2.05
LMBR1-218ENST00000486837 GVQW2A0A096LPI5 108 aaPredicted RBP2.24□□□□□ -2.05
LMBR1-218ENST00000486837 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
LMBR1-218ENST00000486837 MMP24-AS1A0A0U1RRL7 71 aa2.23□□□□□ -2.05
LMBR1-218ENST00000486837 KRTAP13-1Q8IUC0 172 aa2.23□□□□□ -2.05
LMBR1-218ENST00000486837 C5orf56Q8N8D9 126 aa2.23□□□□□ -2.05
LMBR1-218ENST00000486837 C6orf48Q9UBA6 75 aa2.23□□□□□ -2.05
LMBR1-218ENST00000486837 ALMS1Q8TCU4 4167 aa2.23□□□□□ -2.05
LMBR1-218ENST00000486837 KMT2BQ9UMN6 2715 aaPredicted RBP2.22□□□□□ -2.05
LMBR1-218ENST00000486837 LY6G6CO95867 125 aa2.22□□□□□ -2.05
LMBR1-218ENST00000486837 DEFB131AP59861 70 aa2.21□□□□□ -2.06
LMBR1-218ENST00000486837 SPINK13Q1W4C9 94 aa2.21□□□□□ -2.06
LMBR1-218ENST00000486837 SSBP3-AS1Q7Z2R9 100 aa2.21□□□□□ -2.06
LMBR1-218ENST00000486837 C4orf3Q8WVX3 66 aa2.21□□□□□ -2.06
LMBR1-218ENST00000486837 RHPN1-AS1Q9BWJ2 59 aa2.21□□□□□ -2.06
LMBR1-218ENST00000486837 ASCC3Q8N3C0 2202 aaKnown RBP2.21□□□□□ -2.06
LMBR1-218ENST00000486837 RPL37AP61513 92 aaKnown RBP2.2□□□□□ -2.06
LMBR1-218ENST00000486837 CLPSL2Q6UWE3 100 aa2.2□□□□□ -2.06
LMBR1-218ENST00000486837 H3BUA1 57 aa2.18□□□□□ -2.06
LMBR1-218ENST00000486837 DEFB105AQ8NG35 78 aa2.18□□□□□ -2.06
LMBR1-218ENST00000486837 USMG5Q96IX5 58 aa2.18□□□□□ -2.06
LMBR1-218ENST00000486837 KNL1Q8NG31 2342 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 H0YAA0 97 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 UNQ6190/PRO20217Q6UXQ8 127 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 ABCA1O95477 2261 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 DOPEY2Q9Y3R5 2298 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 ASXL3Q9C0F0 2248 aa2.17□□□□□ -2.06
LMBR1-218ENST00000486837 SPRR1AP35321 89 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 DEFB109BQ30KR1 87 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 Q6ZRX8 168 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 CRIPTQ9P021 101 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 CACNA1GO43497 2377 aa2.16□□□□□ -2.06
LMBR1-218ENST00000486837 TECTAO75443 2155 aa2.15□□□□□ -2.07
LMBR1-218ENST00000486837 G3V318 75 aa2.15□□□□□ -2.07
LMBR1-218ENST00000486837 Q6ZSA8 131 aa2.15□□□□□ -2.07
LMBR1-218ENST00000486837 FN1P02751 2386 aaKnown RBP2.14□□□□□ -2.07
LMBR1-218ENST00000486837 DEFB133Q30KQ1 61 aa2.14□□□□□ -2.07
LMBR1-218ENST00000486837 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
LMBR1-218ENST00000486837 HTN1P15515 57 aa2.13□□□□□ -2.07
LMBR1-218ENST00000486837 ICE1Q9Y2F5 2266 aa2.12□□□□□ -2.07
LMBR1-218ENST00000486837 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
LMBR1-218ENST00000486837 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
LMBR1-218ENST00000486837 SPRR1BP22528 89 aa2.1□□□□□ -2.07
LMBR1-218ENST00000486837 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
LMBR1-218ENST00000486837 COX6B2Q6YFQ2 88 aa2.1□□□□□ -2.07
LMBR1-218ENST00000486837 ANKRD17O75179 2603 aaKnown RBP2.1□□□□□ -2.07
LMBR1-218ENST00000486837 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
LMBR1-218ENST00000486837 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
LMBR1-218ENST00000486837 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
LMBR1-218ENST00000486837 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
LMBR1-218ENST00000486837 WNK2Q9Y3S1 2297 aa2.07□□□□□ -2.08
LMBR1-218ENST00000486837 LYNX1P0DP58 116 aa2.07□□□□□ -2.08
LMBR1-218ENST00000486837 DEFB119Q8N690 84 aa2.07□□□□□ -2.08
LMBR1-218ENST00000486837 WNK1Q9H4A3 2382 aa2.06□□□□□ -2.08
LMBR1-218ENST00000486837 COL6A3P12111 3177 aa2.06□□□□□ -2.08
LMBR1-218ENST00000486837 H3BUX3 64 aa2.06□□□□□ -2.08
LMBR1-218ENST00000486837 K7EIL1 84 aa2.06□□□□□ -2.08
LMBR1-218ENST00000486837 DEFB130BP0DP73 79 aa2.06□□□□□ -2.08
LMBR1-218ENST00000486837 DEFB130AP0DP74 79 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms