RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 USP17L23D6RBM5 183 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 SEC61GP60059 68 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 NKAPP1Q8N9T2 125 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 M0R2N4 97 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 FBN3Q75N90 2809 aa11.72□□□□□ -0.53
PDLIM7-207ENST00000486828 CASC10Q5T4H9 136 aa11.71□□□□□ -0.53
PDLIM7-207ENST00000486828 RMI2Q96E14 147 aa11.71□□□□□ -0.53
PDLIM7-207ENST00000486828 TRBV7-4A0A0J9YYF1 115 aa11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 COX7CP15954 63 aa11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 C7orf33Q8WU49 177 aa11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
PDLIM7-207ENST00000486828 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
PDLIM7-207ENST00000486828 PRKDCP78527 4128 aaKnown RBP11.68□□□□□ -0.54
PDLIM7-207ENST00000486828 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-207ENST00000486828 IGLV5-37A0A075B6J1 123 aa11.66□□□□□ -0.54
PDLIM7-207ENST00000486828 Q6ZVQ6 151 aa11.65□□□□□ -0.54
PDLIM7-207ENST00000486828 FAM19A1Q7Z5A9 133 aa11.64□□□□□ -0.55
PDLIM7-207ENST00000486828 COL7A1Q02388 2944 aa11.64□□□□□ -0.55
PDLIM7-207ENST00000486828 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
PDLIM7-207ENST00000486828 STAB2Q8WWQ8 2551 aa11.63□□□□□ -0.55
PDLIM7-207ENST00000486828 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
PDLIM7-207ENST00000486828 LINC01547P58512 204 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-207ENST00000486828 SERP2Q8N6R1 65 aa11.62□□□□□ -0.55
PDLIM7-207ENST00000486828 DNAH9Q9NYC9 4486 aa11.61□□□□□ -0.55
PDLIM7-207ENST00000486828 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
PDLIM7-207ENST00000486828 PRYO14603 147 aa11.6□□□□□ -0.55
PDLIM7-207ENST00000486828 CRYGAP11844 174 aa11.6□□□□□ -0.55
PDLIM7-207ENST00000486828 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
PDLIM7-207ENST00000486828 HAMPP81172 84 aa11.59□□□□□ -0.55
PDLIM7-207ENST00000486828 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
PDLIM7-207ENST00000486828 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 RPL37AP8A6NKH3 93 aa11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 KRTAP4-16G5E9R7 235 aaPredicted RBP11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 SPRR1AP35321 89 aa11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 Q6ZRX8 168 aa11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 DHRS4-AS1Q9P1J3 65 aa11.58□□□□□ -0.55
PDLIM7-207ENST00000486828 CXCL6P80162 114 aa11.58□□□□□ -0.56
PDLIM7-207ENST00000486828 Q8N377 158 aa11.56□□□□□ -0.56
PDLIM7-207ENST00000486828 PRO0628Q9UI54 55 aa11.56□□□□□ -0.56
PDLIM7-207ENST00000486828 ETDCA0A1B0GVM5 59 aa11.55□□□□□ -0.56
PDLIM7-207ENST00000486828 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-207ENST00000486828 DEFB105AQ8NG35 78 aa11.54□□□□□ -0.56
PDLIM7-207ENST00000486828 Q9BRP9 147 aa11.54□□□□□ -0.56
PDLIM7-207ENST00000486828 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.56
PDLIM7-207ENST00000486828 V9GYY9 64 aa11.52□□□□□ -0.56
PDLIM7-207ENST00000486828 IGLV5-48A0A075B6I7 105 aa11.51□□□□□ -0.57
PDLIM7-207ENST00000486828 TGP01266 2768 aa11.51□□□□□ -0.57
PDLIM7-207ENST00000486828 BCE1O60756 84 aa11.5□□□□□ -0.57
PDLIM7-207ENST00000486828 APLNQ9ULZ1 77 aa11.48□□□□□ -0.57
PDLIM7-207ENST00000486828 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
PDLIM7-207ENST00000486828 UBE2DNLQ8IWF7 75 aa11.47□□□□□ -0.57
PDLIM7-207ENST00000486828 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
PDLIM7-207ENST00000486828 SCXQ7RTU7 201 aa11.47□□□□□ -0.57
PDLIM7-207ENST00000486828 REG3GQ6UW15 175 aa11.46□□□□□ -0.58
PDLIM7-207ENST00000486828 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.58
PDLIM7-207ENST00000486828 C16orf90A8MZG2 172 aa11.45□□□□□ -0.58
PDLIM7-207ENST00000486828 PSCAO43653 123 aa11.45□□□□□ -0.58
PDLIM7-207ENST00000486828 A0A096LNI7 61 aa11.45□□□□□ -0.58
PDLIM7-207ENST00000486828 TNP2Q05952 138 aa11.45□□□□□ -0.58
PDLIM7-207ENST00000486828 ERC2-IT1O76042 136 aa11.43□□□□□ -0.58
PDLIM7-207ENST00000486828 NREPQ16612 68 aa11.43□□□□□ -0.58
PDLIM7-207ENST00000486828 UBE2BP63146 152 aa11.43□□□□□ -0.58
PDLIM7-207ENST00000486828 TRAV7A0A075B6U4 112 aa11.41□□□□□ -0.58
PDLIM7-207ENST00000486828 A0A1B0GW54 56 aa11.41□□□□□ -0.58
PDLIM7-207ENST00000486828 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
PDLIM7-207ENST00000486828 Q5XG85 94 aa11.41□□□□□ -0.58
PDLIM7-207ENST00000486828 IGKV2-24A0A0C4DH68 120 aa11.4□□□□□ -0.58
PDLIM7-207ENST00000486828 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM7-207ENST00000486828 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
PDLIM7-207ENST00000486828 A0A1W2PNN7 141 aa11.39□□□□□ -0.59
PDLIM7-207ENST00000486828 TMEM258P61165 79 aa11.39□□□□□ -0.59
PDLIM7-207ENST00000486828 C1orf137Q5JT78 98 aa11.39□□□□□ -0.59
PDLIM7-207ENST00000486828 A0A1W2PNM2 257 aa11.39□□□□□ -0.59
PDLIM7-207ENST00000486828 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
PDLIM7-207ENST00000486828 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-207ENST00000486828 Q8NBF4 154 aa11.36□□□□□ -0.59
PDLIM7-207ENST00000486828 BPY2O14599 106 aa11.35□□□□□ -0.59
PDLIM7-207ENST00000486828 IGKV4-1P06312 121 aa11.35□□□□□ -0.59
PDLIM7-207ENST00000486828 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
PDLIM7-207ENST00000486828 C4orf26Q17RF5 130 aa11.34□□□□□ -0.59
PDLIM7-207ENST00000486828 HRCT1Q6UXD1 115 aa11.34□□□□□ -0.59
PDLIM7-207ENST00000486828 SMIM29Q86T20 159 aa11.34□□□□□ -0.59
PDLIM7-207ENST00000486828 Q8N9L7 120 aa11.34□□□□□ -0.59
PDLIM7-207ENST00000486828 SPRR4Q96PI1 79 aa11.33□□□□□ -0.6
PDLIM7-207ENST00000486828 DNAH7Q8WXX0 4024 aa11.32□□□□□ -0.6
PDLIM7-207ENST00000486828 DYNC2H1Q8NCM8 4307 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-207ENST00000486828 DNAH10Q8IVF4 4471 aa11.32□□□□□ -0.6
PDLIM7-207ENST00000486828 PRLHP81277 87 aa11.31□□□□□ -0.6
PDLIM7-207ENST00000486828 NUPR2A6NF83 97 aa11.31□□□□□ -0.6
PDLIM7-207ENST00000486828 NBDYA0A0U1RRE5 68 aa11.3□□□□□ -0.6
PDLIM7-207ENST00000486828 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
PDLIM7-207ENST00000486828 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
PDLIM7-207ENST00000486828 F8WEM9 126 aa11.29□□□□□ -0.6
PDLIM7-207ENST00000486828 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
PDLIM7-207ENST00000486828 C9orf163Q8N9P6 203 aa11.29□□□□□ -0.6
PDLIM7-207ENST00000486828 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms