RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 TRAV23DV6A0A075B6W5 121 aa11.77□□□□□ -0.53
LMBR1-217ENST00000485985 SPINK1P00995 79 aa11.77□□□□□ -0.53
LMBR1-217ENST00000485985 KRTAP13-3Q3SY46 172 aa11.76□□□□□ -0.53
LMBR1-217ENST00000485985 SYS1-DBNDD2H3BUS1 97 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BKO60814 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BJP06899 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BOP23527 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BBP33778 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BDP58876 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BCP62807 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST2H2BEQ16778 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BHQ93079 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 LITAFQ99732 161 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BNQ99877 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 HIST1H2BMQ99879 126 aa11.74□□□□□ -0.53
LMBR1-217ENST00000485985 ZNF73O43830 326 aaPredicted RBP11.73□□□□□ -0.53
LMBR1-217ENST00000485985 Q8N377 158 aa11.72□□□□□ -0.53
LMBR1-217ENST00000485985 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
LMBR1-217ENST00000485985 RPS29P62273 56 aaKnown RBP11.7□□□□□ -0.54
LMBR1-217ENST00000485985 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-217ENST00000485985 LINC01545Q5VT33 79 aa11.7□□□□□ -0.54
LMBR1-217ENST00000485985 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
LMBR1-217ENST00000485985 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
LMBR1-217ENST00000485985 SPANXCQ9NY87 97 aa11.68□□□□□ -0.54
LMBR1-217ENST00000485985 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
LMBR1-217ENST00000485985 TTTY13Q9BZ97 58 aa11.67□□□□□ -0.54
LMBR1-217ENST00000485985 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
LMBR1-217ENST00000485985 TIMM17BO60830 172 aa11.65□□□□□ -0.54
LMBR1-217ENST00000485985 ZNF815PA8K554 130 aa11.64□□□□□ -0.55
LMBR1-217ENST00000485985 LINC01547P58512 204 aaPredicted RBP11.64□□□□□ -0.55
LMBR1-217ENST00000485985 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
LMBR1-217ENST00000485985 SLC25A20O43772 301 aa11.62□□□□□ -0.55
LMBR1-217ENST00000485985 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
LMBR1-217ENST00000485985 OR13C6PQ8NH95 151 aa11.62□□□□□ -0.55
LMBR1-217ENST00000485985 KRTAP4-1Q9BYQ7 146 aa11.62□□□□□ -0.55
LMBR1-217ENST00000485985 CBY1Q9Y3M2 126 aa11.61□□□□□ -0.55
LMBR1-217ENST00000485985 C5orf52A6NGY3 159 aa11.59□□□□□ -0.55
LMBR1-217ENST00000485985 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
LMBR1-217ENST00000485985 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
LMBR1-217ENST00000485985 SPANXDQ9BXN6 97 aa11.59□□□□□ -0.55
LMBR1-217ENST00000485985 SPRR1BP22528 89 aa11.58□□□□□ -0.56
LMBR1-217ENST00000485985 SEC61BP60468 96 aaKnown RBP11.58□□□□□ -0.56
LMBR1-217ENST00000485985 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
LMBR1-217ENST00000485985 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
LMBR1-217ENST00000485985 ELOF1P60002 83 aaKnown RBP11.55□□□□□ -0.56
LMBR1-217ENST00000485985 KRTDAPP60985 99 aa11.55□□□□□ -0.56
LMBR1-217ENST00000485985 C6orf99Q4VX62 202 aa11.54□□□□□ -0.56
LMBR1-217ENST00000485985 COX7BP24311 80 aa11.53□□□□□ -0.56
LMBR1-217ENST00000485985 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
LMBR1-217ENST00000485985 XP32Q5T750 250 aa11.52□□□□□ -0.57
LMBR1-217ENST00000485985 LINC00518Q8N0U6 118 aa11.52□□□□□ -0.57
LMBR1-217ENST00000485985 SLC25A34Q6PIV7 304 aa11.5□□□□□ -0.57
LMBR1-217ENST00000485985 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
LMBR1-217ENST00000485985 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
LMBR1-217ENST00000485985 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
LMBR1-217ENST00000485985 CRCT1Q9UGL9 99 aa11.48□□□□□ -0.57
LMBR1-217ENST00000485985 FSIP2Q5CZC0 6907 aa11.48□□□□□ -0.57
LMBR1-217ENST00000485985 Q1RN00 199 aa11.47□□□□□ -0.57
LMBR1-217ENST00000485985 LAMTOR3Q9UHA4 124 aa11.47□□□□□ -0.57
LMBR1-217ENST00000485985 C20orf202A1L168 122 aa11.46□□□□□ -0.57
LMBR1-217ENST00000485985 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
LMBR1-217ENST00000485985 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
LMBR1-217ENST00000485985 DEFB105AQ8NG35 78 aa11.45□□□□□ -0.58
LMBR1-217ENST00000485985 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
LMBR1-217ENST00000485985 IFITM1P13164 125 aa11.43□□□□□ -0.58
LMBR1-217ENST00000485985 S100A1P23297 94 aa11.43□□□□□ -0.58
LMBR1-217ENST00000485985 TAL2Q16559 108 aa11.43□□□□□ -0.58
LMBR1-217ENST00000485985 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 SMIM29Q86T20 159 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 MUSTN1Q8IVN3 82 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 COPS9Q8WXC6 57 aa11.41□□□□□ -0.58
LMBR1-217ENST00000485985 A6NDN8 102 aa11.4□□□□□ -0.58
LMBR1-217ENST00000485985 Q6ZVH6 145 aa11.39□□□□□ -0.59
LMBR1-217ENST00000485985 IGLV5-48A0A075B6I7 105 aa11.38□□□□□ -0.59
LMBR1-217ENST00000485985 CD164Q04900 197 aa11.38□□□□□ -0.59
LMBR1-217ENST00000485985 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
LMBR1-217ENST00000485985 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
LMBR1-217ENST00000485985 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
LMBR1-217ENST00000485985 H7C2G1 150 aa11.36□□□□□ -0.59
LMBR1-217ENST00000485985 SMIM11BQ8TCY0 68 aa11.34□□□□□ -0.59
LMBR1-217ENST00000485985 KRTAP19-2Q3LHN2 52 aa11.33□□□□□ -0.6
LMBR1-217ENST00000485985 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
LMBR1-217ENST00000485985 AKR1D1P51857 326 aa11.32□□□□□ -0.6
LMBR1-217ENST00000485985 A4D1N5 150 aa11.31□□□□□ -0.6
LMBR1-217ENST00000485985 PCOTHQ58A44 107 aa11.31□□□□□ -0.6
LMBR1-217ENST00000485985 Q5XG85 94 aa11.31□□□□□ -0.6
LMBR1-217ENST00000485985 SNRPEP62304 92 aaKnown RBP11.29□□□□□ -0.6
LMBR1-217ENST00000485985 HIST3H2BBQ8N257 126 aa11.29□□□□□ -0.6
LMBR1-217ENST00000485985 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
LMBR1-217ENST00000485985 MT1HP80294 61 aa11.28□□□□□ -0.6
LMBR1-217ENST00000485985 C1orf195Q5TG92 126 aa11.28□□□□□ -0.6
LMBR1-217ENST00000485985 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
LMBR1-217ENST00000485985 IGLV8-61A0A075B6I0 122 aa11.25□□□□□ -0.61
LMBR1-217ENST00000485985 CFC1BP0CG36 223 aa11.23□□□□□ -0.61
LMBR1-217ENST00000485985 S100A2P29034 98 aa11.21□□□□□ -0.61
LMBR1-217ENST00000485985 LINC00575Q6W349 94 aa11.21□□□□□ -0.61
LMBR1-217ENST00000485985 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms