RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 LY6G6CO95867 125 aa1.15□□□□□ -2.23
RC3H1-205ENST00000484867 HAMPP81172 84 aa1.15□□□□□ -2.23
RC3H1-205ENST00000484867 KRTAP21-3Q3LHN1 58 aa1.15□□□□□ -2.23
RC3H1-205ENST00000484867 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
RC3H1-205ENST00000484867 FLG2Q5D862 2391 aaPredicted RBP1.15□□□□□ -2.23
RC3H1-205ENST00000484867 RP1L1Q8IWN7 2480 aaPredicted RBP1.15□□□□□ -2.23
RC3H1-205ENST00000484867 IAPPP10997 89 aa1.14□□□□□ -2.23
RC3H1-205ENST00000484867 RPL38P63173 70 aaKnown RBP1.14□□□□□ -2.23
RC3H1-205ENST00000484867 PRB3Q04118 309 aaPredicted RBP1.14□□□□□ -2.23
RC3H1-205ENST00000484867 TFF3Q07654 80 aa1.14□□□□□ -2.23
RC3H1-205ENST00000484867 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
RC3H1-205ENST00000484867 NHSQ6T4R5 1651 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 ERCC6L2Q5T890 1561 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 NCR3O14931 201 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 COX6B1P14854 86 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 COX7BP24311 80 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 SPINK13Q1W4C9 94 aa1.13□□□□□ -2.23
RC3H1-205ENST00000484867 IGIPA6NJ69 53 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 PLNP26678 52 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
RC3H1-205ENST00000484867 UBL5Q9BZL1 73 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 LMO7Q8WWI1 1683 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 SSC5DA1L4H1 1573 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 ZFHX3Q15911 3703 aa1.12□□□□□ -2.23
RC3H1-205ENST00000484867 CNTRLQ7Z7A1 2325 aa1.11□□□□□ -2.23
RC3H1-205ENST00000484867 NDUFA4O00483 81 aa1.11□□□□□ -2.23
RC3H1-205ENST00000484867 LINC00575Q6W349 94 aa1.11□□□□□ -2.23
RC3H1-205ENST00000484867 ARHGAP5-AS1Q96IT6 56 aa1.11□□□□□ -2.23
RC3H1-205ENST00000484867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.11□□□□□ -2.232e-9■■■■■ 59.7
RC3H1-205ENST00000484867 CNOT1A5YKK6 2376 aaKnown RBP1.11□□□□□ -2.23
RC3H1-205ENST00000484867 LRRC37AA6NMS7 1700 aa1.1□□□□□ -2.23
RC3H1-205ENST00000484867 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
RC3H1-205ENST00000484867 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
RC3H1-205ENST00000484867 LOC730098B7Z3J9 87 aa1.1□□□□□ -2.23
RC3H1-205ENST00000484867 LYNX1P0DP58 116 aa1.1□□□□□ -2.23
RC3H1-205ENST00000484867 A0A0G2JMZ2 1700 aa1.09□□□□□ -2.23
RC3H1-205ENST00000484867 LRRC37A2A6NM11 1700 aa1.09□□□□□ -2.23
RC3H1-205ENST00000484867 ANGP03950 147 aaKnown RBP1.09□□□□□ -2.23
RC3H1-205ENST00000484867 CRIPTQ9P021 101 aa1.09□□□□□ -2.23
RC3H1-205ENST00000484867 CCL22O00626 93 aa1.08□□□□□ -2.24
RC3H1-205ENST00000484867 CRIP1P50238 77 aa1.08□□□□□ -2.24
RC3H1-205ENST00000484867 SPINK9Q5DT21 86 aa1.08□□□□□ -2.24
RC3H1-205ENST00000484867 Q6ZSA8 131 aa1.08□□□□□ -2.24
RC3H1-205ENST00000484867 TMEM167BQ9NRX6 74 aa1.08□□□□□ -2.24
RC3H1-205ENST00000484867 PTPRZ1P23471 2315 aaPredicted RBP1.07□□□□□ -2.24
RC3H1-205ENST00000484867 RPS27P42677 84 aaKnown RBP1.07□□□□□ -2.24
RC3H1-205ENST00000484867 UBE2DNLQ8IWF7 75 aa1.07□□□□□ -2.24
RC3H1-205ENST00000484867 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
RC3H1-205ENST00000484867 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 IGF2RP11717 2491 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 ETDCA0A1B0GVM5 59 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 LINC01590Q5TEZ4 76 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 NAV3Q8IVL0 2385 aa1.06□□□□□ -2.24
RC3H1-205ENST00000484867 SPTY2D1-AS1A0A0U1RR47 76 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 K7EIL1 84 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 DEFB114Q30KQ6 69 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 LINC00308Q8TCZ7 52 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 LEAP2Q969E1 77 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 PRO3102Q9H379 93 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
RC3H1-205ENST00000484867 H0YGX0 51 aa1.04□□□□□ -2.24
RC3H1-205ENST00000484867 ROS1P08922 2347 aa1.03□□□□□ -2.24
RC3H1-205ENST00000484867 I3L2K1 104 aa1.03□□□□□ -2.24
RC3H1-205ENST00000484867 LINC00158P58513 81 aa1.03□□□□□ -2.24
RC3H1-205ENST00000484867 RPL39P62891 51 aaKnown RBP1.03□□□□□ -2.24
RC3H1-205ENST00000484867 SMIM2Q9BVW6 85 aa1.03□□□□□ -2.24
RC3H1-205ENST00000484867 DEFB131BA0A096LNP1 70 aa1.02□□□□□ -2.25
RC3H1-205ENST00000484867 RPL39LQ96EH5 51 aaKnown RBP1.02□□□□□ -2.25
RC3H1-205ENST00000484867 CDKN2A-AS1Q9UH64 79 aa1.02□□□□□ -2.25
RC3H1-205ENST00000484867 TPRP12270 2363 aaKnown RBP1.01□□□□□ -2.25
RC3H1-205ENST00000484867 PKDREJQ9NTG1 2253 aa1.01□□□□□ -2.25
RC3H1-205ENST00000484867 PIGYQ3MUY2 71 aa1.01□□□□□ -2.25
RC3H1-205ENST00000484867 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
RC3H1-205ENST00000484867 BPTFQ12830 3046 aa1.01□□□□□ -2.25
RC3H1-205ENST00000484867 K7EQZ3 153 aa1□□□□□ -2.25
RC3H1-205ENST00000484867 NDUFA1O15239 70 aa1□□□□□ -2.25
RC3H1-205ENST00000484867 DEFB123Q8N688 67 aa1□□□□□ -2.25
RC3H1-205ENST00000484867 C10orf95Q9H7T3 257 aa1□□□□□ -2.25
RC3H1-205ENST00000484867 ACACAQ13085 2346 aa0.99□□□□□ -2.25
RC3H1-205ENST00000484867 WNK2Q9Y3S1 2297 aa0.99□□□□□ -2.25
RC3H1-205ENST00000484867 MRPL33O75394 65 aaKnown RBP0.99□□□□□ -2.25
RC3H1-205ENST00000484867 WFDC13Q8IUB5 93 aa0.99□□□□□ -2.25
RC3H1-205ENST00000484867 DEFB106AQ8N104 65 aa0.99□□□□□ -2.25
RC3H1-205ENST00000484867 MRPL34Q9BQ48 92 aaKnown RBP0.99□□□□□ -2.25
RC3H1-205ENST00000484867 HELZ2Q9BYK8 2649 aaKnown RBP0.99□□□□□ -2.25
RC3H1-205ENST00000484867 TNRC6CQ9HCJ0 1690 aaKnown RBP0.98□□□□□ -2.25
RC3H1-205ENST00000484867 KRTAP10-4P60372 401 aaPredicted RBP0.98□□□□□ -2.25
RC3H1-205ENST00000484867 COX6A2Q02221 97 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 LELP1Q5T871 98 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 Q8IZM0 81 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 USMG5Q96IX5 58 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 CNFNQ9BYD5 112 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 PCNX1Q96RV3 2341 aa0.98□□□□□ -2.25
RC3H1-205ENST00000484867 JMJD1CQ15652 2540 aa0.97□□□□□ -2.25
RC3H1-205ENST00000484867 STATHP02808 62 aa0.97□□□□□ -2.25
RC3H1-205ENST00000484867 POLR2KP53803 58 aaKnown RBP0.97□□□□□ -2.25
RC3H1-205ENST00000484867 KMT2BQ9UMN6 2715 aaPredicted RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms