RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 CFAP46Q8IYW2 2715 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 I3L3M4 83 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 FREM3P0C091 2139 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 FXYD6P3P58550 94 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 ZNF625Q96I27 306 aaPredicted RBP2.01□□□□□ -2.09
FXN-204ENST00000484259 PKDREJQ9NTG1 2253 aa2.01□□□□□ -2.09
FXN-204ENST00000484259 USP9YO00507 2555 aaPredicted RBP2.01□□□□□ -2.09
FXN-204ENST00000484259 NOTCH2Q04721 2471 aa2□□□□□ -2.09
FXN-204ENST00000484259 CREBBPQ92793 2442 aa2□□□□□ -2.09
FXN-204ENST00000484259 GCN1Q92616 2671 aaKnown RBP2□□□□□ -2.09
FXN-204ENST00000484259 USP9XQ93008 2570 aaPredicted RBP2□□□□□ -2.09
FXN-204ENST00000484259 A0A0G2JQZ4 141 aa2□□□□□ -2.09
FXN-204ENST00000484259 NDUFA4O00483 81 aa2□□□□□ -2.09
FXN-204ENST00000484259 C5orf56Q8N8D9 126 aa2□□□□□ -2.09
FXN-204ENST00000484259 CACNA1CQ13936 2221 aa2□□□□□ -2.09
FXN-204ENST00000484259 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
FXN-204ENST00000484259 NAV2Q8IVL1 2488 aa2□□□□□ -2.09
FXN-204ENST00000484259 CACNA1DQ01668 2161 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 ZZEF1O43149 2961 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 FREM2Q5SZK8 3169 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 HECTD1Q9ULT8 2610 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 PRRC2CQ9Y520 2896 aaKnown RBP1.99□□□□□ -2.09
FXN-204ENST00000484259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.99□□□□□ -2.09
FXN-204ENST00000484259 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
FXN-204ENST00000484259 SPINK4O60575 86 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 ARL14EPLP0DKL9 152 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 C14orf177Q52M58 125 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 SPACA4Q8TDM5 124 aa1.99□□□□□ -2.09
FXN-204ENST00000484259 MPDZO75970 2070 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 NCOA6Q14686 2063 aaPredicted RBP1.98□□□□□ -2.09
FXN-204ENST00000484259 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
FXN-204ENST00000484259 FLNCQ14315 2725 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 TRGV1A0A0A0MS02 117 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 KALRNO60229 2985 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 MAPK1IP1LQ8NDC0 245 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 Q96NJ1 140 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 LINC00472Q9H8W2 130 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 TMEM167BQ9NRX6 74 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 TIMM8BQ9Y5J9 83 aaPredicted RBP1.98□□□□□ -2.09
FXN-204ENST00000484259 CELSR3Q9NYQ7 3312 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 ABCA4P78363 2273 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 SPEGQ15772 3267 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 SPG11Q96JI7 2443 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 UBR5O95071 2799 aaPredicted RBP1.98□□□□□ -2.09
FXN-204ENST00000484259 MED12Q93074 2177 aa1.98□□□□□ -2.09
FXN-204ENST00000484259 CFAP47Q6ZTR5 3102 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 IGLV4-60A0A075B6I1 120 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 H0YGX0 51 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 INE1O15225 51 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 MRPL33O75394 65 aaKnown RBP1.97□□□□□ -2.09
FXN-204ENST00000484259 COA5Q86WW8 74 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 KRTAP7-1Q8IUC3 87 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 KCNQ1DNQ9H478 68 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 NBEAQ8NFP9 2946 aa1.97□□□□□ -2.09
FXN-204ENST00000484259 ATMQ13315 3056 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 CENPEQ02224 2701 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 A0A087WYN8 130 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 A0A1B0GU69 56 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 ACYP2P14621 99 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 COX7BP24311 80 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 ASPMQ8IZT6 3477 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 CR1P17927 2039 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 AKAP6Q13023 2319 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 CCDC168Q8NDH2 2452 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 MAST4O15021 2626 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 UNC79Q9P2D8 2635 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 HEATR1Q9H583 2144 aaKnown RBP1.96□□□□□ -2.1
FXN-204ENST00000484259 ABCA12Q86UK0 2595 aa1.96□□□□□ -2.1
FXN-204ENST00000484259 LOC400499M0QZD8 3231 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 ANKRD17O75179 2603 aaKnown RBP1.95□□□□□ -2.1
FXN-204ENST00000484259 ROS1P08922 2347 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 ETDCA0A1B0GVM5 59 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 NCR3O14931 201 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 IGKV3-15P01624 115 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 TFF3Q07654 80 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 Q8N9L7 120 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 LINC00304Q8N9R0 145 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 ASH1LQ9NR48 2969 aaKnown RBP1.95□□□□□ -2.1
FXN-204ENST00000484259 SETXQ7Z333 2677 aaKnown RBP1.95□□□□□ -2.1
FXN-204ENST00000484259 FREM1Q5H8C1 2179 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 ALPK2Q86TB3 2170 aa1.95□□□□□ -2.1
FXN-204ENST00000484259 MYO9AB2RTY4 2548 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 LAMA5O15230 3695 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 PLCE1Q9P212 2302 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 BOD1L1Q8NFC6 3051 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 ZFHX4Q86UP3 3567 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 CPSF4LA6NMK7 179 aaKnown RBP1.94□□□□□ -2.1
FXN-204ENST00000484259 M0R2N4 97 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 NDUFA3O95167 84 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 HAMPP81172 84 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 KRTAP11-1Q8IUC1 163 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 TENM4Q6N022 2769 aa1.94□□□□□ -2.1
FXN-204ENST00000484259 CADP27708 2225 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms