RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 LINC00575Q6W349 94 aa16.82■□□□□ 0.28
SHOX2-204ENST00000483851 DNAH10Q8IVF4 4471 aa16.81■□□□□ 0.28
SHOX2-204ENST00000483851 SMCR5Q8TEV8 140 aa16.81■□□□□ 0.28
SHOX2-204ENST00000483851 C7orf33Q8WU49 177 aa16.81■□□□□ 0.28
SHOX2-204ENST00000483851 KCNQ1DNQ9H478 68 aa16.8■□□□□ 0.28
SHOX2-204ENST00000483851 A0A096LNI7 61 aa16.8■□□□□ 0.28
SHOX2-204ENST00000483851 FAM168BA1KXE4 195 aa16.78■□□□□ 0.28
SHOX2-204ENST00000483851 C14orf132Q9NPU4 83 aa16.78■□□□□ 0.28
SHOX2-204ENST00000483851 TRBV7-7A0A0K0K1E9 115 aa16.77■□□□□ 0.27
SHOX2-204ENST00000483851 KRTAP7-1Q8IUC3 87 aa16.77■□□□□ 0.27
SHOX2-204ENST00000483851 TMEM256-PLSCR3K7ERE1 68 aa16.76■□□□□ 0.27
SHOX2-204ENST00000483851 GAGE2AQ6NT46 116 aa16.76■□□□□ 0.27
SHOX2-204ENST00000483851 LINC00474Q9P2X8 69 aa16.76■□□□□ 0.27
SHOX2-204ENST00000483851 A0A1B0GV72 72 aa16.75■□□□□ 0.27
SHOX2-204ENST00000483851 ELOF1P60002 83 aaKnown RBP16.75■□□□□ 0.27
SHOX2-204ENST00000483851 MRPL55Q7Z7F7 128 aaKnown RBP16.75■□□□□ 0.27
SHOX2-204ENST00000483851 LINC00643Q86TS7 51 aa16.75■□□□□ 0.27
SHOX2-204ENST00000483851 COX7BP24311 80 aa16.74■□□□□ 0.27
SHOX2-204ENST00000483851 IGLV1-50A0A075B6I6 118 aa16.73■□□□□ 0.27
SHOX2-204ENST00000483851 FAM19A5Q7Z5A7 132 aaPredicted RBP16.73■□□□□ 0.27
SHOX2-204ENST00000483851 PRYO14603 147 aa16.72■□□□□ 0.27
SHOX2-204ENST00000483851 IGKV2-24A0A0C4DH68 120 aa16.71■□□□□ 0.27
SHOX2-204ENST00000483851 hADV29S1A0JD25 119 aa16.71■□□□□ 0.27
SHOX2-204ENST00000483851 JMJD7-PLA2G4BH0Y9G9 81 aa16.7■□□□□ 0.26
SHOX2-204ENST00000483851 DNAH6Q9C0G6 4158 aa16.69■□□□□ 0.26
SHOX2-204ENST00000483851 IMUPQ9GZP8 106 aa16.68■□□□□ 0.26
SHOX2-204ENST00000483851 H3BQ85 93 aa16.67■□□□□ 0.26
SHOX2-204ENST00000483851 SPRR1AP35321 89 aa16.67■□□□□ 0.26
SHOX2-204ENST00000483851 NDUFV3P56181 108 aaKnown RBP16.67■□□□□ 0.26
SHOX2-204ENST00000483851 LINC00528Q8N1L1 170 aa16.66■□□□□ 0.26
SHOX2-204ENST00000483851 ALMS1Q8TCU4 4167 aa16.66■□□□□ 0.26
SHOX2-204ENST00000483851 A0A1W2PNN7 141 aa16.65■□□□□ 0.26
SHOX2-204ENST00000483851 CCKP06307 115 aa16.65■□□□□ 0.26
SHOX2-204ENST00000483851 KMT2AQ03164 3969 aa16.64■□□□□ 0.25
SHOX2-204ENST00000483851 RPL37AP8A6NKH3 93 aa16.63■□□□□ 0.25
SHOX2-204ENST00000483851 GHRHP01286 108 aa16.63■□□□□ 0.25
SHOX2-204ENST00000483851 RTL8CO15255 209 aa16.62■□□□□ 0.25
SHOX2-204ENST00000483851 KRTAP4-16G5E9R7 235 aaPredicted RBP16.61■□□□□ 0.25
SHOX2-204ENST00000483851 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.61■□□□□ 0.25
SHOX2-204ENST00000483851 ANAPC13Q9BS18 74 aa16.61■□□□□ 0.25
SHOX2-204ENST00000483851 LINC00846Q9NV44 126 aa16.61■□□□□ 0.25
SHOX2-204ENST00000483851 CHTF8P0CG12 524 aa16.61■□□□□ 0.25
SHOX2-204ENST00000483851 Q6ZQY7 126 aa16.59■□□□□ 0.25
SHOX2-204ENST00000483851 ETDCA0A1B0GVM5 59 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 REG3GQ6UW15 175 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 Q6ZRX8 168 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 SPACA4Q8TDM5 124 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 EPM2AB3EWF7 344 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 B5MCH6 92 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 DHRS4-AS1Q9P1J3 65 aa16.56■□□□□ 0.24
SHOX2-204ENST00000483851 IGLV5-52A0A0A0MRZ9 124 aa16.54■□□□□ 0.24
SHOX2-204ENST00000483851 TNP2Q05952 138 aa16.54■□□□□ 0.24
SHOX2-204ENST00000483851 DNAH2Q9P225 4427 aa16.53■□□□□ 0.24
SHOX2-204ENST00000483851 LOC110117498A0A087WWA1 95 aa16.52■□□□□ 0.24
SHOX2-204ENST00000483851 Q6JHZ5 121 aa16.52■□□□□ 0.23
SHOX2-204ENST00000483851 RBM3P98179 157 aaKnown RBP16.51■□□□□ 0.23
SHOX2-204ENST00000483851 Q6ZQT0 140 aa16.5■□□□□ 0.23
SHOX2-204ENST00000483851 PANO1I0J062 215 aa16.49■□□□□ 0.23
SHOX2-204ENST00000483851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.49■□□□□ 0.23
SHOX2-204ENST00000483851 DPH3Q96FX2 82 aa16.48■□□□□ 0.23
SHOX2-204ENST00000483851 PHF5AQ7RTV0 110 aaKnown RBP16.48■□□□□ 0.23
SHOX2-204ENST00000483851 LAMTOR3Q9UHA4 124 aa16.47■□□□□ 0.23
SHOX2-204ENST00000483851 UBE2BP63146 152 aa16.46■□□□□ 0.23
SHOX2-204ENST00000483851 DNAH17Q9UFH2 4485 aa16.44■□□□□ 0.22
SHOX2-204ENST00000483851 FAM236AA0A1B0GUQ0 79 aa16.44■□□□□ 0.22
SHOX2-204ENST00000483851 FAM236BA0A1B0GV22 79 aa16.44■□□□□ 0.22
SHOX2-204ENST00000483851 Q9BRP9 147 aa16.44■□□□□ 0.22
SHOX2-204ENST00000483851 LCE6AA0A183 80 aa16.42■□□□□ 0.22
SHOX2-204ENST00000483851 PLAC8Q9NZF1 115 aa16.41■□□□□ 0.22
SHOX2-204ENST00000483851 H0Y9J4 135 aa16.4■□□□□ 0.22
SHOX2-204ENST00000483851 PDE6GP18545 87 aa16.4■□□□□ 0.22
SHOX2-204ENST00000483851 FUSP35637 526 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHOX2-204ENST00000483851 IGKV3D-7A0A0C4DH55 119 aa16.39■□□□□ 0.22
SHOX2-204ENST00000483851 HIST1H4AP62805 103 aaKnown RBP16.39■□□□□ 0.22
SHOX2-204ENST00000483851 TRBV7-4A0A0J9YYF1 115 aa16.38■□□□□ 0.21
SHOX2-204ENST00000483851 FAM19A1Q7Z5A9 133 aa16.38■□□□□ 0.21
SHOX2-204ENST00000483851 DSCR8Q96T75 97 aa16.38■□□□□ 0.21
SHOX2-204ENST00000483851 HECTD4Q9Y4D8 3996 aa16.36■□□□□ 0.21
SHOX2-204ENST00000483851 KRTAP11-1Q8IUC1 163 aa16.35■□□□□ 0.21
SHOX2-204ENST00000483851 CCDC179H3BU77 68 aa16.35■□□□□ 0.21
SHOX2-204ENST00000483851 ATP5EP2Q5VTU8 51 aa16.34■□□□□ 0.21
SHOX2-204ENST00000483851 IGLV5-48A0A075B6I7 105 aa16.33■□□□□ 0.21
SHOX2-204ENST00000483851 KRTAP10-2P60368 255 aa16.33■□□□□ 0.21
SHOX2-204ENST00000483851 BCE1O60756 84 aa16.31■□□□□ 0.2
SHOX2-204ENST00000483851 LINC01547P58512 204 aaPredicted RBP16.31■□□□□ 0.2
SHOX2-204ENST00000483851 UBL5Q9BZL1 73 aa16.31■□□□□ 0.2
SHOX2-204ENST00000483851 FRAS1Q86XX4 4008 aa16.3■□□□□ 0.2
SHOX2-204ENST00000483851 Q8N377 158 aa16.3■□□□□ 0.2
SHOX2-204ENST00000483851 PRLHP81277 87 aa16.29■□□□□ 0.2
SHOX2-204ENST00000483851 ERC2-IT1O76042 136 aa16.29■□□□□ 0.2
SHOX2-204ENST00000483851 LINC00336Q6ZUF6 198 aa16.28■□□□□ 0.2
SHOX2-204ENST00000483851 DEFB105AQ8NG35 78 aa16.25■□□□□ 0.19
SHOX2-204ENST00000483851 UBE2AP49459 152 aa16.25■□□□□ 0.19
SHOX2-204ENST00000483851 A0A087WVE0 104 aa16.23■□□□□ 0.19
SHOX2-204ENST00000483851 ST20-AS1Q8NBB2 130 aa16.23■□□□□ 0.19
SHOX2-204ENST00000483851 HIGD2AQ9BW72 106 aa16.23■□□□□ 0.19
SHOX2-204ENST00000483851 KRTAP13-1Q8IUC0 172 aa16.22■□□□□ 0.19
SHOX2-204ENST00000483851 HYDINQ4G0P3 5121 aa16.22■□□□□ 0.19
SHOX2-204ENST00000483851 Q6ZSA8 131 aa16.22■□□□□ 0.19
SHOX2-204ENST00000483851 Q6ZVQ6 151 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms