RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ZCCHC13Q8WW36 166 aaKnown RBP2.31□□□□□ -2.04
UPF3A-207ENST00000481131 LINC00526Q96FQ7 95 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 TIMM21Q9BVV7 248 aa2.31□□□□□ -2.04
UPF3A-207ENST00000481131 NXT2Q9NPJ8 142 aaKnown RBP2.31□□□□□ -2.04
UPF3A-207ENST00000481131 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
UPF3A-207ENST00000481131 KIAA1109Q2LD37 5005 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 HSPG2P98160 4391 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 LINC01546A6NGU7 62 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 IGIPA6NJ69 53 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 ZNF73O43830 326 aaPredicted RBP2.3□□□□□ -2.04
UPF3A-207ENST00000481131 COX6A2Q02221 97 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 TOMM6Q96B49 74 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 TMEM141Q96I45 108 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 SPANXA1Q9NS26 97 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 CYSLTR1Q9Y271 337 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
UPF3A-207ENST00000481131 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 NUPR1O60356 82 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 UBE2D1P51668 147 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 MRPS36P82909 103 aaKnown RBP2.29□□□□□ -2.04
UPF3A-207ENST00000481131 SS18Q15532 418 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 FAM19A2Q8N3H0 131 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 AMELXQ99217 191 aa2.29□□□□□ -2.04
UPF3A-207ENST00000481131 HERC2O95714 4834 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 GVQW2A0A096LPI5 108 aaPredicted RBP2.28□□□□□ -2.04
UPF3A-207ENST00000481131 C1orf196B1AJZ1 125 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 K7EMI3 77 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 COX7A2LO14548 114 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 HBDP02042 147 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 LINC00614P0C842 121 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 SMAGPQ0VAQ4 97 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 Q6ZRU5 148 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 BAGE3Q86Y29 109 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
UPF3A-207ENST00000481131 VPS13BQ7Z7G8 4022 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 IGHV1-58A0A0C4DH39 117 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BKO60814 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 SMR3BP02814 79 aaPredicted RBP2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BJP06899 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BOP23527 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BBP33778 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 NDUFA6P56556 154 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BDP58876 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 LINC00313P59037 77 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BCP62807 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 SPAG11BQ08648 103 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST2H2BEQ16778 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 FAM229BQ4G0N7 80 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.27□□□□□ -2.05
UPF3A-207ENST00000481131 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 C2orf82Q6UX34 121 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 Q6ZSA8 131 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 C9orf163Q8N9P6 203 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BHQ93079 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BNQ99877 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 HIST1H2BMQ99879 126 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 CST9LQ9H4G1 147 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 CDKN2A-AS1Q9UH64 79 aa2.27□□□□□ -2.05
UPF3A-207ENST00000481131 IGHV3-64A0A075B6Q5 118 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 A0A096LNI7 61 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 C11orf86A6NJI1 115 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 SPINK8P0C7L1 97 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 FABP4P15090 132 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 S100A1P23297 94 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 RAB5BP61020 215 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 C9orf116Q5BN46 136 aaPredicted RBP2.26□□□□□ -2.05
UPF3A-207ENST00000481131 UNQ6190/PRO20217Q6UXQ8 127 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 SDIM1Q6ZPB5 146 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 CHCHD1Q96BP2 118 aaKnown RBP2.26□□□□□ -2.05
UPF3A-207ENST00000481131 CARD19Q96LW7 228 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 PMCHL2Q9BQD1 86 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 C2orf88Q9BSF0 95 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 TOMM7Q9P0U1 55 aa2.26□□□□□ -2.05
UPF3A-207ENST00000481131 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.25□□□□□ -2.05
UPF3A-207ENST00000481131 TINCRA0A1B0GVN0 87 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 IGLC3P0DOY3 106 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 G0S2P27469 103 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 HERVK_113P63121 156 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 IFI27L1Q96BM0 104 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 MRPL35Q9NZE8 188 aaKnown RBP2.25□□□□□ -2.05
UPF3A-207ENST00000481131 C6orf48Q9UBA6 75 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
UPF3A-207ENST00000481131 LINC01549A6NIU2 74 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 NDUFA1O15239 70 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 LEPROTL1O95214 131 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 APOMO95445 188 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 CIRBPQ14011 172 aaKnown RBP2.24□□□□□ -2.05
UPF3A-207ENST00000481131 TMEM170BQ5T4T1 132 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 Q5VSD8 79 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 SCGB1D4Q6XE38 83 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 SPACA4Q8TDM5 124 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 COX7B2Q8TF08 81 aa2.24□□□□□ -2.05
UPF3A-207ENST00000481131 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
UPF3A-207ENST00000481131 FAT1Q14517 4588 aa2.23□□□□□ -2.05
UPF3A-207ENST00000481131 TRAV12-1A0A0B4J245 112 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms