RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 HHLA3Q9XRX5 114 aa3.04□□□□□ -1.92
STRADBP1-201ENST00000478954 TRBV7-3A0A075B6L6 115 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 TRBV19A0A075B6N1 114 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 IGKV2D-26A0A0A0MRZ7 120 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 LINC01549A6NIU2 74 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 FABP5P3A8MUU1 101 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 OOSP1A8MZH6 123 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 HRES1P13985 223 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 DEFB114Q30KQ6 69 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 ZNF833PQ6ZTB9 187 aa3.03□□□□□ -1.92
STRADBP1-201ENST00000478954 SSPOA2VEC9 5147 aa3.03□□□□□ -1.93
STRADBP1-201ENST00000478954 A0A1B0GW54 56 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 F8VRH5 84 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 H3BVH4 76 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 K7EMI3 77 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 UBE2L6O14933 153 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 IGKV1-16P04430 117 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 RPL27AP46776 148 aaKnown RBP3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 UBE2D3P61077 147 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 UBE2D2P62837 147 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 WT1-ASQ06250 92 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 EXOC3-AS1Q8N2X6 119 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 LEAP2Q969E1 77 aa3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 MRPL35Q9NZE8 188 aaKnown RBP3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
STRADBP1-201ENST00000478954 TMSB15BA0A087X1C1 80 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 TRAV41A0A0B4J266 112 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 H3BRN7 92 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 NDUFA3O95167 84 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 IGLC6P0CF74 106 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 UBE2D1P51668 147 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 FXYD7P58549 80 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 LINC00311Q8N616 119 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 CARD19Q96LW7 228 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 CNFNQ9BYD5 112 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 TTTY13Q9BZ97 58 aa3.01□□□□□ -1.93
STRADBP1-201ENST00000478954 TRAV16A0A0A6YYK6 109 aaPredicted RBP3□□□□□ -1.93
STRADBP1-201ENST00000478954 IGHV3-73A0A0B4J1V6 119 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 TRAV2A0A0B4J234 112 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 ZNF815PA8K554 130 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 PPP1R17O96001 155 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 RPL7P18124 248 aaKnown RBP3□□□□□ -1.93
STRADBP1-201ENST00000478954 CRIP1P50238 77 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 ATXN8Q156A1 80 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 Q6ZRN7 208 aaPredicted RBP3□□□□□ -1.93
STRADBP1-201ENST00000478954 SCGB3A1Q96QR1 104 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 PRO1854Q9UHT4 67 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
STRADBP1-201ENST00000478954 C9JAW5 83 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 CCDC179H3BU77 68 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 TCL1BO95988 128 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 C10orf55Q5SWW7 151 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 PRR9Q5T870 116 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 IGFL1Q6UW32 110 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 C10orf126Q8N4M7 172 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 DYNLRB2Q8TF09 96 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 LINC01600Q96MT4 127 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 SLC50A1Q9BRV3 221 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 PRADC1Q9BSG0 188 aa2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 MRPL36Q9P0J6 103 aaKnown RBP2.99□□□□□ -1.93
STRADBP1-201ENST00000478954 TRAV4A0A0B4J268 109 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 RBAKDNA6NC62 111 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 E7EUB6 86 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 ACYP1P07311 99 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 COX6CP09669 75 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 TMEM170BQ5T4T1 132 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 SMIM2Q9BVW6 85 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 IMUPQ9GZP8 106 aa2.98□□□□□ -1.93
STRADBP1-201ENST00000478954 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 IGKV2-40A0A087WW87 121 aaPredicted RBP2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 TRBV10-2A0A0K0K1G8 114 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 H3BT86 120 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 I3L2K1 104 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 J3KT08 172 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 M0R3E3 92 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 IGKV1-17P01599 117 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 IGKV2D-40P01614 121 aaPredicted RBP2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 LGALS3P17931 250 aaKnown RBP2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 SPANXN1Q5VSR9 72 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 TMEM141Q96I45 108 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
STRADBP1-201ENST00000478954 USH2AO75445 5202 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 A0A0J9YY99 117 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 TRBV7-7A0A0K0K1E9 115 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 A0A1B0GX51 115 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 C11orf86A6NJI1 115 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 M0R2P5 195 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 EMP1P54849 157 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 C9orf153Q5TBE3 101 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 SFTA2Q6UW10 78 aa2.96□□□□□ -1.94
STRADBP1-201ENST00000478954 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms