RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PRO3102Q9H379 93 aa1.27□□□□□ -2.21
XRN1-211ENST00000477237 G3V318 75 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 ACYP2P14621 99 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 PRCDQ00LT1 54 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 LINC00575Q6W349 94 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 DEFB106AQ8N104 65 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 RPL39LQ96EH5 51 aaKnown RBP1.26□□□□□ -2.21
XRN1-211ENST00000477237 CDKN2A-AS1Q9UH64 79 aa1.26□□□□□ -2.21
XRN1-211ENST00000477237 BRWD1Q9NSI6 2320 aa1.25□□□□□ -2.21
XRN1-211ENST00000477237 I3L2K1 104 aa1.25□□□□□ -2.21
XRN1-211ENST00000477237 INE1O15225 51 aa1.25□□□□□ -2.21
XRN1-211ENST00000477237 ANGP03950 147 aaKnown RBP1.25□□□□□ -2.21
XRN1-211ENST00000477237 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
XRN1-211ENST00000477237 PRB3Q04118 309 aaPredicted RBP1.25□□□□□ -2.21
XRN1-211ENST00000477237 LY6EQ16553 131 aa1.25□□□□□ -2.21
XRN1-211ENST00000477237 H3BRN7 92 aa1.24□□□□□ -2.21
XRN1-211ENST00000477237 PDE4DIPQ5VU43 2346 aa1.24□□□□□ -2.21
XRN1-211ENST00000477237 PTPRQQ9UMZ3 2332 aa1.24□□□□□ -2.21
XRN1-211ENST00000477237 TECTAO75443 2155 aa1.24□□□□□ -2.21
XRN1-211ENST00000477237 LYNX1G3V0Z9 82 aa1.23□□□□□ -2.21
XRN1-211ENST00000477237 K7EQZ3 153 aa1.23□□□□□ -2.21
XRN1-211ENST00000477237 SSBP3-AS1Q7Z2R9 100 aa1.23□□□□□ -2.21
XRN1-211ENST00000477237 GVQW2A0A096LPI5 108 aaPredicted RBP1.22□□□□□ -2.21
XRN1-211ENST00000477237 IGFL1Q6UW32 110 aa1.22□□□□□ -2.21
XRN1-211ENST00000477237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
XRN1-211ENST00000477237 USF3Q68DE3 2245 aa1.21□□□□□ -2.21
XRN1-211ENST00000477237 IGLV5-48A0A075B6I7 105 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 SPTY2D1-AS1A0A0U1RR47 76 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 DEFB134Q4QY38 66 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 Q6ZRX8 168 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 LEAP2Q969E1 77 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 SORL1Q92673 2214 aa1.21□□□□□ -2.22
XRN1-211ENST00000477237 IGKV2-24A0A0C4DH68 120 aa1.2□□□□□ -2.22
XRN1-211ENST00000477237 H0YAA0 97 aa1.2□□□□□ -2.22
XRN1-211ENST00000477237 M0QY20 66 aa1.2□□□□□ -2.22
XRN1-211ENST00000477237 Q6ZRN7 208 aaPredicted RBP1.2□□□□□ -2.22
XRN1-211ENST00000477237 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
XRN1-211ENST00000477237 PCOTHQ58A44 107 aa1.19□□□□□ -2.22
XRN1-211ENST00000477237 C10orf99Q6UWK7 81 aa1.19□□□□□ -2.22
XRN1-211ENST00000477237 TP53AIP1Q9HCN2 124 aa1.19□□□□□ -2.22
XRN1-211ENST00000477237 RTTNQ86VV8 2226 aa1.19□□□□□ -2.22
XRN1-211ENST00000477237 URB1O60287 2271 aaKnown RBP1.18□□□□□ -2.22
XRN1-211ENST00000477237 COX6A2Q02221 97 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 WT1-ASQ06250 92 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 WFDC13Q8IUB5 93 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 TMEM167AQ8TBQ9 72 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 C6orf48Q9UBA6 75 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.18□□□□□ -2.228e-7■□□□□ 9.3
XRN1-211ENST00000477237 ABCA1O95477 2261 aa1.18□□□□□ -2.22
XRN1-211ENST00000477237 CNOT1A5YKK6 2376 aaKnown RBP1.18□□□□□ -2.22
XRN1-211ENST00000477237 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
XRN1-211ENST00000477237 DOPEY2Q9Y3R5 2298 aa1.17□□□□□ -2.22
XRN1-211ENST00000477237 PRR9Q5T870 116 aa1.17□□□□□ -2.22
XRN1-211ENST00000477237 MINOS1Q5TGZ0 78 aa1.17□□□□□ -2.22
XRN1-211ENST00000477237 ASXL3Q9C0F0 2248 aa1.17□□□□□ -2.22
XRN1-211ENST00000477237 MMP24-AS1A0A0U1RRL7 71 aa1.16□□□□□ -2.22
XRN1-211ENST00000477237 RPL39P5Q59GN2 51 aa1.16□□□□□ -2.22
XRN1-211ENST00000477237 COX6B2Q6YFQ2 88 aa1.16□□□□□ -2.22
XRN1-211ENST00000477237 Q6ZSA8 131 aa1.16□□□□□ -2.22
XRN1-211ENST00000477237 PLCE1Q9P212 2302 aa1.16□□□□□ -2.22
XRN1-211ENST00000477237 AHCTF1Q8WYP5 2266 aa1.15□□□□□ -2.22
XRN1-211ENST00000477237 WFDC10BQ8IUB3 73 aa1.15□□□□□ -2.23
XRN1-211ENST00000477237 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.23
XRN1-211ENST00000477237 KNL1Q8NG31 2342 aa1.15□□□□□ -2.23
XRN1-211ENST00000477237 FN1P02751 2386 aaKnown RBP1.14□□□□□ -2.23
XRN1-211ENST00000477237 K7EIM0 57 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 LYNX1P0DP58 116 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
XRN1-211ENST00000477237 KRTAP13-2Q52LG2 175 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 PIEZO2Q9H5I5 2752 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 CHD7Q9P2D1 2997 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 CACNA1EQ15878 2313 aa1.14□□□□□ -2.23
XRN1-211ENST00000477237 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 LELP1Q5T871 98 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 DEFB123Q8N688 67 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 DEFB104AQ8WTQ1 72 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 KAAG1Q9UBP8 84 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 NAV3Q8IVL0 2385 aa1.13□□□□□ -2.23
XRN1-211ENST00000477237 IGF2RP11717 2491 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 A8MTW9 85 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 DEFB131AP59861 70 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 CNTRLQ7Z7A1 2325 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 ASCC3Q8N3C0 2202 aaKnown RBP1.12□□□□□ -2.23
XRN1-211ENST00000477237 MGAQ8IWI9 3026 aa1.12□□□□□ -2.23
XRN1-211ENST00000477237 DEFB108AA8MXU0 73 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 SPINK13Q1W4C9 94 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 KLK9Q2XQG4 91 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 CLPSL2Q6UWE3 100 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 REV3LO60673 3130 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 GPR179Q6PRD1 2367 aa1.11□□□□□ -2.23
XRN1-211ENST00000477237 OTOGQ6ZRI0 2925 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 K7EIL1 84 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 STATHP02808 62 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 DEFB130BP0DP73 79 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms