RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 PKD1L2Q7Z442 2459 aa4.44□□□□□ -1.7
TTC3-215ENST00000476784 HTTP42858 3142 aa4.44□□□□□ -1.7
TTC3-215ENST00000476784 A8MWP4 228 aa4.43□□□□□ -1.7
TTC3-215ENST00000476784 LAMA3Q16787 3333 aa4.43□□□□□ -1.7
TTC3-215ENST00000476784 CPAMD8Q8IZJ3 1885 aa4.43□□□□□ -1.7
TTC3-215ENST00000476784 CNFNQ9BYD5 112 aa4.42□□□□□ -1.7
TTC3-215ENST00000476784 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
TTC3-215ENST00000476784 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
TTC3-215ENST00000476784 PTPRBP23467 1997 aa4.42□□□□□ -1.7
TTC3-215ENST00000476784 CRIP3Q6Q6R5 217 aa4.42□□□□□ -1.7
TTC3-215ENST00000476784 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
TTC3-215ENST00000476784 TRBV7-4A0A0J9YYF1 115 aa4.41□□□□□ -1.7
TTC3-215ENST00000476784 HRES1P13985 223 aa4.41□□□□□ -1.7
TTC3-215ENST00000476784 COL27A1Q8IZC6 1860 aaPredicted RBP4.4□□□□□ -1.7
TTC3-215ENST00000476784 LINC00612Q8N6U2 182 aa4.4□□□□□ -1.7
TTC3-215ENST00000476784 KRTAP10-3P60369 221 aa4.4□□□□□ -1.71
TTC3-215ENST00000476784 C8orf17Q9NRJ1 99 aa4.4□□□□□ -1.71
TTC3-215ENST00000476784 UQCR11O14957 56 aa4.4□□□□□ -1.71
TTC3-215ENST00000476784 LITAFQ99732 161 aa4.4□□□□□ -1.71
TTC3-215ENST00000476784 C10orf142B7Z368 130 aa4.39□□□□□ -1.71
TTC3-215ENST00000476784 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
TTC3-215ENST00000476784 C19orf73Q9NVV2 129 aa4.39□□□□□ -1.71
TTC3-215ENST00000476784 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
TTC3-215ENST00000476784 MKI67P46013 3256 aaKnown RBP4.39□□□□□ -1.71
TTC3-215ENST00000476784 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
TTC3-215ENST00000476784 SETD2Q9BYW2 2564 aaPredicted RBP4.38□□□□□ -1.71
TTC3-215ENST00000476784 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
TTC3-215ENST00000476784 IGFL1Q6UW32 110 aa4.38□□□□□ -1.71
TTC3-215ENST00000476784 H3BPC8 53 aa4.37□□□□□ -1.71
TTC3-215ENST00000476784 MUC22E2RYF6 1773 aaPredicted RBP4.37□□□□□ -1.71
TTC3-215ENST00000476784 COA5Q86WW8 74 aa4.37□□□□□ -1.71
TTC3-215ENST00000476784 ANKRD17O75179 2603 aaKnown RBP4.34□□□□□ -1.71
TTC3-215ENST00000476784 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
TTC3-215ENST00000476784 S4R3F8 94 aa4.34□□□□□ -1.71
TTC3-215ENST00000476784 CSAG1Q6PB30 78 aa4.34□□□□□ -1.72
TTC3-215ENST00000476784 PRO0628Q9UI54 55 aa4.34□□□□□ -1.72
TTC3-215ENST00000476784 YPEL4Q96NS1 127 aa4.34□□□□□ -1.72
TTC3-215ENST00000476784 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
TTC3-215ENST00000476784 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
TTC3-215ENST00000476784 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
TTC3-215ENST00000476784 COL4A2P08572 1712 aa4.33□□□□□ -1.72
TTC3-215ENST00000476784 SPTBN4Q9H254 2564 aa4.33□□□□□ -1.72
TTC3-215ENST00000476784 R4GN34 69 aa4.32□□□□□ -1.72
TTC3-215ENST00000476784 A0A1B0GW54 56 aa4.32□□□□□ -1.72
TTC3-215ENST00000476784 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
TTC3-215ENST00000476784 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
TTC3-215ENST00000476784 USP24Q9UPU5 2620 aa4.31□□□□□ -1.72
TTC3-215ENST00000476784 A8MUN3 132 aa4.31□□□□□ -1.72
TTC3-215ENST00000476784 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
TTC3-215ENST00000476784 KCNQ1DNQ9H478 68 aa4.3□□□□□ -1.72
TTC3-215ENST00000476784 LCE6AA0A183 80 aa4.29□□□□□ -1.72
TTC3-215ENST00000476784 USP9YO00507 2555 aaPredicted RBP4.29□□□□□ -1.72
TTC3-215ENST00000476784 CD164Q04900 197 aa4.29□□□□□ -1.72
TTC3-215ENST00000476784 LCA10Q71F78 164 aa4.28□□□□□ -1.72
TTC3-215ENST00000476784 WIPF1O43516 503 aa4.28□□□□□ -1.72
TTC3-215ENST00000476784 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
TTC3-215ENST00000476784 ANKRD11Q6UB99 2663 aaPredicted RBP4.28□□□□□ -1.72
TTC3-215ENST00000476784 RANBP2P49792 3224 aaKnown RBP4.27□□□□□ -1.73
TTC3-215ENST00000476784 LOC110117498A0A087WWA1 95 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 OXTP01178 125 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 MGAM2Q2M2H8 2515 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 REV3LO60673 3130 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.27□□□□□ -1.73
TTC3-215ENST00000476784 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
TTC3-215ENST00000476784 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
TTC3-215ENST00000476784 COX8CQ7Z4L0 72 aa4.26□□□□□ -1.73
TTC3-215ENST00000476784 Q8N377 158 aa4.25□□□□□ -1.73
TTC3-215ENST00000476784 CNBPP62633 177 aaKnown RBP4.24□□□□□ -1.73
TTC3-215ENST00000476784 FLNBO75369 2602 aaKnown RBP4.24□□□□□ -1.73
TTC3-215ENST00000476784 EYSQ5T1H1 3165 aa4.24□□□□□ -1.73
TTC3-215ENST00000476784 A0A096LNJ9 63 aa4.23□□□□□ -1.73
TTC3-215ENST00000476784 USP34Q70CQ2 3546 aa4.23□□□□□ -1.73
TTC3-215ENST00000476784 PCSK5Q92824 1860 aa4.23□□□□□ -1.73
TTC3-215ENST00000476784 M0QZ58 72 aa4.22□□□□□ -1.73
TTC3-215ENST00000476784 LINC00310P59036 64 aa4.22□□□□□ -1.73
TTC3-215ENST00000476784 UNC80Q8N2C7 3258 aa4.21□□□□□ -1.74
TTC3-215ENST00000476784 PRR34Q9NV39 138 aa4.21□□□□□ -1.74
TTC3-215ENST00000476784 EPG5Q9HCE0 2579 aa4.21□□□□□ -1.74
TTC3-215ENST00000476784 A0A1B0GU33 70 aa4.21□□□□□ -1.74
TTC3-215ENST00000476784 WDR87Q6ZQQ6 2873 aa4.2□□□□□ -1.74
TTC3-215ENST00000476784 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
TTC3-215ENST00000476784 Q1T7F1 81 aa4.2□□□□□ -1.74
TTC3-215ENST00000476784 SZT2Q5T011 3432 aa4.19□□□□□ -1.74
TTC3-215ENST00000476784 MUC3AQ02505 3323 aa4.19□□□□□ -1.74
TTC3-215ENST00000476784 XIRP2A4UGR9 3374 aa4.18□□□□□ -1.74
TTC3-215ENST00000476784 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
TTC3-215ENST00000476784 HECTD1Q9ULT8 2610 aa4.18□□□□□ -1.74
TTC3-215ENST00000476784 KRTAP1-3Q8IUG1 177 aa4.17□□□□□ -1.74
TTC3-215ENST00000476784 GIG44P09565 113 aaPredicted RBP4.17□□□□□ -1.74
TTC3-215ENST00000476784 SPTBN5Q9NRC6 3674 aaKnown RBP4.17□□□□□ -1.74
TTC3-215ENST00000476784 SPINK7P58062 85 aa4.17□□□□□ -1.74
TTC3-215ENST00000476784 TRIOO75962 3097 aa4.17□□□□□ -1.74
TTC3-215ENST00000476784 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 FAM229BQ4G0N7 80 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 CYP4F30PQ9H0H9 118 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 CR1P17927 2039 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 A0A096LNT2 108 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms