RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 H0Y9P7 68 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 M0R2N4 97 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 SPAG11AQ6PDA7 123 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 COA5Q86WW8 74 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 ARHGAP32A7KAX9 2087 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 COL12A1Q99715 3063 aa3.9□□□□□ -1.78
ECHDC1-215ENST00000475319 MED13LQ71F56 2210 aa3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 IGHV3OR16-12A0A075B7B8 117 aa3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 CCL3P10147 92 aa3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 PRR4Q16378 134 aa3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 CNEP1R1Q8N9A8 125 aa3.9□□□□□ -1.79
ECHDC1-215ENST00000475319 SPG11Q96JI7 2443 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 ABCA2Q9BZC7 2435 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 A0A096LNT2 108 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 IGHV3-35A0A0C4DH35 117 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 IGHV3-66A0A0C4DH42 116 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 KRTAP16-1A8MUX0 517 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 SPINK7P58062 85 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 KPRPQ5T749 579 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 TTTY12Q9BZ98 90 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 NAV3Q8IVL0 2385 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 ZFHX3Q15911 3703 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 ZNF407Q9C0G0 2248 aa3.89□□□□□ -1.79
ECHDC1-215ENST00000475319 ABCA4P78363 2273 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 IGLV1-47P01700 117 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 COX6A2Q02221 97 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 PRB3Q04118 309 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 LINC00612Q8N6U2 182 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 DEFB104AQ8WTQ1 72 aa3.88□□□□□ -1.79
ECHDC1-215ENST00000475319 SETD2Q9BYW2 2564 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-215ENST00000475319 RPL37AP8A6NKH3 93 aa3.87□□□□□ -1.79
ECHDC1-215ENST00000475319 APELAP0DMC3 54 aa3.87□□□□□ -1.79
ECHDC1-215ENST00000475319 LRBAP50851 2863 aa3.87□□□□□ -1.79
ECHDC1-215ENST00000475319 CELSR2Q9HCU4 2923 aa3.87□□□□□ -1.79
ECHDC1-215ENST00000475319 APCP25054 2843 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 MTORP42345 2549 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 TRGV4A0A0C4DH28 118 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 MSMBP08118 114 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 DEFB113Q30KQ7 82 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 DEFB112Q30KQ8 113 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 Q8N9L7 120 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 ZNRD1Q9P1U0 126 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 ITPR3Q14573 2671 aa3.86□□□□□ -1.79
ECHDC1-215ENST00000475319 IGLV7-46A0A075B6I9 117 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 IGHV3-23P01764 117 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 KLK9Q2XQG4 91 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 Q6ZR54 194 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 Q8NBF4 154 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 BSNQ9UPA5 3926 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 CRYBG3Q68DQ2 2970 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 IGLV1-44P01699 117 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 C9orf163Q8N9P6 203 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 ST20-AS1Q8NBB2 130 aa3.85□□□□□ -1.79
ECHDC1-215ENST00000475319 FBN2P35556 2912 aa3.84□□□□□ -1.79
ECHDC1-215ENST00000475319 DNAJC13O75165 2243 aa3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 PRB2P02812 416 aaPredicted RBP3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 HIVEP1P15822 2718 aa3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 Q6ZQY7 126 aa3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 Q8NDZ9 215 aa3.84□□□□□ -1.8
ECHDC1-215ENST00000475319 ANKHD1Q8IWZ3 2542 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-215ENST00000475319 COX17Q14061 63 aa3.83□□□□□ -1.8
ECHDC1-215ENST00000475319 NPBQ8NG41 125 aa3.83□□□□□ -1.8
ECHDC1-215ENST00000475319 CCL19Q99731 98 aa3.83□□□□□ -1.8
ECHDC1-215ENST00000475319 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
ECHDC1-215ENST00000475319 IGHV1-2P23083 117 aa3.82□□□□□ -1.8
ECHDC1-215ENST00000475319 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
ECHDC1-215ENST00000475319 FAM215AQ9Y5M1 114 aa3.82□□□□□ -1.8
ECHDC1-215ENST00000475319 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
ECHDC1-215ENST00000475319 A0A087WSZ3 146 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 LINC00959A0A1B0GUT2 108 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 IGHV1-46P01743 117 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 CCL3L1P16619 93 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 AKAP6Q13023 2319 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 RELNP78509 3460 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 PLXNB1O43157 2135 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 HIVEP2P31629 2446 aa3.81□□□□□ -1.8
ECHDC1-215ENST00000475319 NBPF19A0A087WUL8 3843 aa3.8□□□□□ -1.8
ECHDC1-215ENST00000475319 TNCP24821 2201 aa3.8□□□□□ -1.8
ECHDC1-215ENST00000475319 PDZD2O15018 2839 aa3.8□□□□□ -1.8
ECHDC1-215ENST00000475319 MALRD1Q5VYJ5 2156 aa3.79□□□□□ -1.8
ECHDC1-215ENST00000475319 RTTNQ86VV8 2226 aa3.79□□□□□ -1.8
ECHDC1-215ENST00000475319 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
ECHDC1-215ENST00000475319 TOMM7Q9P0U1 55 aa3.79□□□□□ -1.8
ECHDC1-215ENST00000475319 ACANP16112 2415 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 TACC2O95359 2948 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 K7ERS5 55 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 UQCR11O14957 56 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 Q8IZM0 81 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 SPRR4Q96PI1 79 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 JMJD1CQ15652 2540 aa3.78□□□□□ -1.8
ECHDC1-215ENST00000475319 PRR14LQ5THK1 2151 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms