RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FAM168BA1KXE4 195 aa6.28□□□□□ -1.4
USP39-214ENST00000474572 C16orf90A8MZG2 172 aa6.28□□□□□ -1.4
USP39-214ENST00000474572 PDE6GP18545 87 aa6.28□□□□□ -1.4
USP39-214ENST00000474572 RBM3P98179 157 aaKnown RBP6.28□□□□□ -1.4
USP39-214ENST00000474572 MGAM2Q2M2H8 2515 aa6.27□□□□□ -1.41
USP39-214ENST00000474572 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
USP39-214ENST00000474572 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
USP39-214ENST00000474572 B5MCH6 92 aa6.27□□□□□ -1.41
USP39-214ENST00000474572 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
USP39-214ENST00000474572 MRPL55Q7Z7F7 128 aaKnown RBP6.27□□□□□ -1.41
USP39-214ENST00000474572 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
USP39-214ENST00000474572 A0A096LNI7 61 aa6.26□□□□□ -1.41
USP39-214ENST00000474572 PSCAO43653 123 aa6.26□□□□□ -1.41
USP39-214ENST00000474572 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
USP39-214ENST00000474572 Q6ZRX8 168 aa6.26□□□□□ -1.41
USP39-214ENST00000474572 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
USP39-214ENST00000474572 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
USP39-214ENST00000474572 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
USP39-214ENST00000474572 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
USP39-214ENST00000474572 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
USP39-214ENST00000474572 FAM19A5Q7Z5A7 132 aaPredicted RBP6.24□□□□□ -1.41
USP39-214ENST00000474572 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
USP39-214ENST00000474572 Q9BRP9 147 aa6.24□□□□□ -1.41
USP39-214ENST00000474572 IGLV5-48A0A075B6I7 105 aa6.23□□□□□ -1.41
USP39-214ENST00000474572 RPL37AP8A6NKH3 93 aa6.23□□□□□ -1.41
USP39-214ENST00000474572 M0R2N4 97 aa6.23□□□□□ -1.41
USP39-214ENST00000474572 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
USP39-214ENST00000474572 VPS13DQ5THJ4 4388 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 PLECQ15149 4684 aaKnown RBP6.22□□□□□ -1.41
USP39-214ENST00000474572 ETDCA0A1B0GVM5 59 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
USP39-214ENST00000474572 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 Q8N377 158 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
USP39-214ENST00000474572 TNP2Q05952 138 aa6.21□□□□□ -1.42
USP39-214ENST00000474572 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
USP39-214ENST00000474572 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.42
USP39-214ENST00000474572 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
USP39-214ENST00000474572 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.2□□□□□ -1.42
USP39-214ENST00000474572 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
USP39-214ENST00000474572 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
USP39-214ENST00000474572 UBL5Q9BZL1 73 aa6.2□□□□□ -1.42
USP39-214ENST00000474572 EPM2AB3EWF7 344 aa6.19□□□□□ -1.42
USP39-214ENST00000474572 Q6ZR54 194 aa6.19□□□□□ -1.42
USP39-214ENST00000474572 IGKV3D-7A0A0C4DH55 119 aa6.18□□□□□ -1.42
USP39-214ENST00000474572 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
USP39-214ENST00000474572 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
USP39-214ENST00000474572 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
USP39-214ENST00000474572 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
USP39-214ENST00000474572 Q6ZVQ6 151 aa6.17□□□□□ -1.42
USP39-214ENST00000474572 A0A1B0GW54 56 aa6.16□□□□□ -1.42
USP39-214ENST00000474572 H0Y9J4 135 aa6.16□□□□□ -1.42
USP39-214ENST00000474572 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
USP39-214ENST00000474572 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
USP39-214ENST00000474572 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.42
USP39-214ENST00000474572 A0A087WTM6 91 aa6.15□□□□□ -1.42
USP39-214ENST00000474572 UBE2BP63146 152 aa6.15□□□□□ -1.42
USP39-214ENST00000474572 ST20-AS1Q8NBB2 130 aa6.15□□□□□ -1.42
USP39-214ENST00000474572 ATOX1O00244 68 aa6.14□□□□□ -1.43
USP39-214ENST00000474572 CXCL6P80162 114 aa6.14□□□□□ -1.43
USP39-214ENST00000474572 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
USP39-214ENST00000474572 SMIM29Q86T20 159 aa6.14□□□□□ -1.43
USP39-214ENST00000474572 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
USP39-214ENST00000474572 PRKDCP78527 4128 aaKnown RBP6.14□□□□□ -1.43
USP39-214ENST00000474572 LYSTQ99698 3801 aa6.13□□□□□ -1.43
USP39-214ENST00000474572 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
USP39-214ENST00000474572 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
USP39-214ENST00000474572 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
USP39-214ENST00000474572 A0A087WVE0 104 aa6.12□□□□□ -1.43
USP39-214ENST00000474572 CCDC179H3BU77 68 aa6.12□□□□□ -1.43
USP39-214ENST00000474572 PANO1I0J062 215 aa6.12□□□□□ -1.43
USP39-214ENST00000474572 SPRR1BP22528 89 aa6.12□□□□□ -1.43
USP39-214ENST00000474572 C3orf22Q8N5N4 141 aa6.12□□□□□ -1.43
USP39-214ENST00000474572 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 PRLHP81277 87 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 Q8NBF4 154 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 SPRR4Q96PI1 79 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 DNAH17Q9UFH2 4485 aa6.11□□□□□ -1.43
USP39-214ENST00000474572 C1orf137Q5JT78 98 aa6.1□□□□□ -1.43
USP39-214ENST00000474572 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
USP39-214ENST00000474572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
USP39-214ENST00000474572 BCE1O60756 84 aa6.09□□□□□ -1.43
USP39-214ENST00000474572 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
USP39-214ENST00000474572 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 UQCRQO14949 82 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 RTL8CO15255 209 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 COX7CP15954 63 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 HAMPP81172 84 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
USP39-214ENST00000474572 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
USP39-214ENST00000474572 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP39-214ENST00000474572 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
USP39-214ENST00000474572 NREPQ16612 68 aa6.06□□□□□ -1.44
USP39-214ENST00000474572 C1orf134Q5TEV5 83 aa6.06□□□□□ -1.44
USP39-214ENST00000474572 DNAH2Q9P225 4427 aa6.06□□□□□ -1.44
USP39-214ENST00000474572 F8WEM9 126 aa6.05□□□□□ -1.44
USP39-214ENST00000474572 CRYGAP11844 174 aa6.05□□□□□ -1.44
USP39-214ENST00000474572 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms