RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 LINC00518Q8N0U6 118 aa11.91□□□□□ -0.5
SNX13-206ENST00000474067 NPC2P61916 151 aa11.9□□□□□ -0.5
SNX13-206ENST00000474067 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
SNX13-206ENST00000474067 ZNF73O43830 326 aaPredicted RBP11.89□□□□□ -0.51
SNX13-206ENST00000474067 ADAMTSL4-AS1Q5T5F5 129 aa11.89□□□□□ -0.51
SNX13-206ENST00000474067 C3orf22Q8N5N4 141 aa11.89□□□□□ -0.51
SNX13-206ENST00000474067 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
SNX13-206ENST00000474067 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
SNX13-206ENST00000474067 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
SNX13-206ENST00000474067 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
SNX13-206ENST00000474067 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
SNX13-206ENST00000474067 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
SNX13-206ENST00000474067 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
SNX13-206ENST00000474067 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
SNX13-206ENST00000474067 SPINK1P00995 79 aa11.85□□□□□ -0.51
SNX13-206ENST00000474067 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
SNX13-206ENST00000474067 Q6ZVH6 145 aa11.84□□□□□ -0.51
SNX13-206ENST00000474067 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
SNX13-206ENST00000474067 LITAFQ99732 161 aa11.84□□□□□ -0.51
SNX13-206ENST00000474067 S100A1P23297 94 aa11.83□□□□□ -0.52
SNX13-206ENST00000474067 SLC25A34Q6PIV7 304 aa11.83□□□□□ -0.52
SNX13-206ENST00000474067 IFITM1P13164 125 aa11.82□□□□□ -0.52
SNX13-206ENST00000474067 FP248Q71RG6 208 aaPredicted RBP11.82□□□□□ -0.52
SNX13-206ENST00000474067 Q8NBF4 154 aa11.82□□□□□ -0.52
SNX13-206ENST00000474067 Q9BRP9 147 aa11.82□□□□□ -0.52
SNX13-206ENST00000474067 S100A2P29034 98 aa11.81□□□□□ -0.52
SNX13-206ENST00000474067 DHRS4-AS1Q9P1J3 65 aa11.81□□□□□ -0.52
SNX13-206ENST00000474067 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
SNX13-206ENST00000474067 TPRXLQ17RH7 258 aa11.8□□□□□ -0.52
SNX13-206ENST00000474067 RETNLBQ9BQ08 111 aa11.8□□□□□ -0.52
SNX13-206ENST00000474067 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
SNX13-206ENST00000474067 A0A0U1RQV1 116 aa11.79□□□□□ -0.52
SNX13-206ENST00000474067 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
SNX13-206ENST00000474067 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
SNX13-206ENST00000474067 MOBPQ13875 183 aa11.78□□□□□ -0.52
SNX13-206ENST00000474067 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
SNX13-206ENST00000474067 ERC2-IT1O76042 136 aa11.77□□□□□ -0.53
SNX13-206ENST00000474067 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
SNX13-206ENST00000474067 S100A6P06703 90 aa11.76□□□□□ -0.53
SNX13-206ENST00000474067 TTTY13Q9BZ97 58 aa11.75□□□□□ -0.53
SNX13-206ENST00000474067 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
SNX13-206ENST00000474067 COX7BP24311 80 aa11.73□□□□□ -0.53
SNX13-206ENST00000474067 LPAP08519 4548 aa11.73□□□□□ -0.53
SNX13-206ENST00000474067 RNF213Q63HN8 5207 aa11.72□□□□□ -0.53
SNX13-206ENST00000474067 TRBV7-6A0A0J9YX20 115 aa11.72□□□□□ -0.53
SNX13-206ENST00000474067 ANKRD39Q53RE8 183 aa11.72□□□□□ -0.53
SNX13-206ENST00000474067 ATOH7Q8N100 152 aa11.72□□□□□ -0.53
SNX13-206ENST00000474067 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.53
SNX13-206ENST00000474067 C6orf99Q4VX62 202 aa11.7□□□□□ -0.54
SNX13-206ENST00000474067 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
SNX13-206ENST00000474067 A6NDN8 102 aa11.69□□□□□ -0.54
SNX13-206ENST00000474067 SLC25A20O43772 301 aa11.69□□□□□ -0.54
SNX13-206ENST00000474067 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
SNX13-206ENST00000474067 A0A1B0GWB2 263 aa11.68□□□□□ -0.54
SNX13-206ENST00000474067 A4D1N5 150 aa11.68□□□□□ -0.54
SNX13-206ENST00000474067 SPRR1BP22528 89 aa11.68□□□□□ -0.54
SNX13-206ENST00000474067 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
SNX13-206ENST00000474067 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
SNX13-206ENST00000474067 NHP2Q9NX24 153 aaKnown RBP11.67□□□□□ -0.54
SNX13-206ENST00000474067 TAL2Q16559 108 aa11.65□□□□□ -0.54
SNX13-206ENST00000474067 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
SNX13-206ENST00000474067 MUSTN1Q8IVN3 82 aa11.65□□□□□ -0.54
SNX13-206ENST00000474067 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
SNX13-206ENST00000474067 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
SNX13-206ENST00000474067 TEX49A0A1B0GTD5 131 aa11.61□□□□□ -0.55
SNX13-206ENST00000474067 Q8N377 158 aa11.61□□□□□ -0.55
SNX13-206ENST00000474067 VAMP3Q15836 100 aa11.6□□□□□ -0.55
SNX13-206ENST00000474067 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
SNX13-206ENST00000474067 PRO1933Q9H354 126 aa11.56□□□□□ -0.56
SNX13-206ENST00000474067 SCGB1D1O95968 90 aa11.55□□□□□ -0.56
SNX13-206ENST00000474067 CD164Q04900 197 aa11.54□□□□□ -0.56
SNX13-206ENST00000474067 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
SNX13-206ENST00000474067 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.57
SNX13-206ENST00000474067 IGLV5-48A0A075B6I7 105 aa11.51□□□□□ -0.57
SNX13-206ENST00000474067 Q1RN00 199 aa11.51□□□□□ -0.57
SNX13-206ENST00000474067 SEC61BP60468 96 aaKnown RBP11.5□□□□□ -0.57
SNX13-206ENST00000474067 H7C2G1 150 aa11.49□□□□□ -0.57
SNX13-206ENST00000474067 F8WEM9 126 aa11.48□□□□□ -0.57
SNX13-206ENST00000474067 HIST1H4GQ99525 98 aa11.48□□□□□ -0.57
SNX13-206ENST00000474067 COX8AP10176 69 aa11.46□□□□□ -0.57
SNX13-206ENST00000474067 BVES-AS1Q5T3Y7 98 aa11.46□□□□□ -0.57
SNX13-206ENST00000474067 DLEU1O43261 78 aa11.45□□□□□ -0.58
SNX13-206ENST00000474067 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
SNX13-206ENST00000474067 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
SNX13-206ENST00000474067 SNCGO76070 127 aa11.43□□□□□ -0.58
SNX13-206ENST00000474067 hADV29S1A0JD25 119 aa11.42□□□□□ -0.58
SNX13-206ENST00000474067 Q5XG85 94 aa11.42□□□□□ -0.58
SNX13-206ENST00000474067 LINC00575Q6W349 94 aa11.42□□□□□ -0.58
SNX13-206ENST00000474067 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.58
SNX13-206ENST00000474067 SMIM29Q86T20 159 aa11.4□□□□□ -0.58
SNX13-206ENST00000474067 PPDPFLQ8WWR9 84 aa11.39□□□□□ -0.59
SNX13-206ENST00000474067 TCL1BO95988 128 aa11.38□□□□□ -0.59
SNX13-206ENST00000474067 MUC2Q02817 5179 aa11.37□□□□□ -0.59
SNX13-206ENST00000474067 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
SNX13-206ENST00000474067 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
SNX13-206ENST00000474067 XP32Q5T750 250 aa11.36□□□□□ -0.59
SNX13-206ENST00000474067 Q6JHZ5 121 aa11.36□□□□□ -0.59
SNX13-206ENST00000474067 Q6ZQY7 126 aa11.36□□□□□ -0.59
SNX13-206ENST00000474067 RAB37Q96AX2 223 aa11.36□□□□□ -0.59
SNX13-206ENST00000474067 HIGD1BQ9P298 99 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms