RNA–Protein interactions for RNA: ENST00000473295.2

SCN1A-205, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 544 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-205ENST00000473295 TRBV25-1A0A075B6N4 114 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TRAV21A0A0B4J279 112 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 A0A1B0GWA3 101 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 MIF4GDA9UHW6 222 aaKnown RBP-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 LINC00587B1AMM8 73 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 K7EP34 96 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 K7ERU9 68 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 YPEL1O60688 119 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 SNCGO76070 127 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 MPC2O95563 127 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 IAPPP10997 89 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TCTAP57738 103 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TPPP2P59282 170 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 NCS1P62166 190 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 CLPSL2Q6UWE3 100 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TAC4Q86UU9 113 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TRGV9Q99603 122 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 PDCD10Q9BUL8 212 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 MANBALQ9NQG1 85 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 GSKIPQ9P0R6 139 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 UBE2D4Q9Y2X8 147 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 CEP295Q9C0D2 2601 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 SZT2Q5T011 3432 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 LY75O60449 1722 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 PKD1L3Q7Z443 1732 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 RNF17Q9BXT8 1623 aaKnown RBP-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 ZFYVE16Q7Z3T8 1539 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 NCOA2Q15596 1464 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 FAM186AA6NE01 2351 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 CLIP1P30622 1438 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 BORCS7-ASMTA0A0B4J1R7 106 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 F8WEM9 126 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 APOC3P02656 99 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 S100A6P06703 90 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 TNP1P09430 55 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 IFI6P09912 130 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 S100GP29377 79 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 COPZ1P61923 177 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 GNG11P61952 73 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 WT1-ASQ06250 92 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 Q56UQ5 140 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 CRYBG3Q68DQ2 2970 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 IFT20Q8IY31 132 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 CHMP6Q96FZ7 201 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 C20orf78Q9BR46 151 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 VPS25Q9BRG1 176 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 TPT1P8Q9HAU6 139 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 SAR1AQ9NR31 198 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 PRO1854Q9UHT4 67 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 ATPIF1Q9UII2 106 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 NRAPQ86VF7 1730 aa-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 PARP4Q9UKK3 1724 aaKnown RBP-0.78□□□□□ -2.53
SCN1A-205ENST00000473295 NWD1Q149M9 1564 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 ATP7BP35670 1465 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 TLN2Q9Y4G6 2542 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 ROCK2O75116 1388 aaKnown RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 ROCK1Q13464 1354 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 MYH4Q9Y623 1939 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 TRAV30A0A087WSZ9 112 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 SPTY2D1-AS1A0A0U1RR47 76 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 MMP24-AS1A0A0U1RRL7 71 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 A0A1B0GV72 72 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 GNG14A0A1W2PPG7 69 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 FAM107AO95990 144 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 SFTA3P0C7M3 94 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 SAA2P0DJI9 122 aaPredicted RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 SNCAP37840 140 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 GUCA1AP43080 201 aaPredicted RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 TDRG1Q3Y452 100 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CCDC153Q494R4 210 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 PSMG4Q5JS54 123 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 C9orf153Q5TBE3 101 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 MMGT1Q8N4V1 131 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 C1orf54Q8WWF1 131 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 PP6455Q8WZ26 134 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 AQP10Q96PS8 301 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 PSMG3Q9BT73 122 aaPredicted RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CENPHQ9H3R5 247 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 FAIMQ9NVQ4 179 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 GOLGA4Q13439 2230 aaKnown RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CRYBG1Q9Y4K1 1723 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 ZC3H13Q5T200 1668 aaKnown RBP-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 BOD1L1Q8NFC6 3051 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CFAP54Q96N23 3096 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 DEPDC5O75140 1603 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 ARHGAP5Q13017 1502 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CLASP1Q7Z460 1538 aa-0.79□□□□□ -2.54
SCN1A-205ENST00000473295 CD163L1Q9NR16 1453 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 SUPT6HQ7KZ85 1726 aaKnown RBP-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 ABCA3Q99758 1704 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 KIF1AQ12756 1690 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 PLCH1Q4KWH8 1693 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 UBE2L5PA0A1B0GUS4 154 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 A6NIN4 97 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 A8MTW9 85 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 E5RI56 91 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 TMEM262E9PQX1 116 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 H3BQ15 152 aa-0.8□□□□□ -2.54
SCN1A-205ENST00000473295 M0R2Z0 102 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms