RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 SNCGO76070 127 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 TRACP01848 142 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 LINC00474Q9P2X8 69 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 STAB2Q8WWQ8 2551 aa3.89□□□□□ -1.79
SMNDC1-204ENST00000471297 TRBV7-6A0A0J9YX20 115 aa3.89□□□□□ -1.79
SMNDC1-204ENST00000471297 M0QXV9 152 aa3.89□□□□□ -1.79
SMNDC1-204ENST00000471297 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
SMNDC1-204ENST00000471297 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
SMNDC1-204ENST00000471297 MEGF8Q7Z7M0 2845 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 TRAV23DV6A0A075B6W5 121 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 C9JAW5 83 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 SDIM1Q6ZPB5 146 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 DIRC1Q969H9 104 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 KCNQ1DNQ9H478 68 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 COL7A1Q02388 2944 aa3.88□□□□□ -1.79
SMNDC1-204ENST00000471297 A0A096LNI7 61 aa3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 H3BT86 120 aa3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 SLC25A20O43772 301 aa3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 ZNF73O43830 326 aaPredicted RBP3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 DNAL4O96015 105 aa3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 MRPL55Q7Z7F7 128 aaKnown RBP3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 C7orf33Q8WU49 177 aa3.87□□□□□ -1.79
SMNDC1-204ENST00000471297 IGLV1-50A0A075B6I6 118 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 H3BQ85 93 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 COX7BP24311 80 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 LINC00575Q6W349 94 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 FAM19A5Q7Z5A7 132 aaPredicted RBP3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 ANKRD29Q8N6D5 301 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 FAM218AQ96MZ4 157 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 DNAH9Q9NYC9 4486 aa3.86□□□□□ -1.79
SMNDC1-204ENST00000471297 A0A1W2PNN7 141 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 hADV29S1A0JD25 119 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 RTL8CO15255 209 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 BAALC-AS2P0C853 105 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 INAFM2P0DMQ5 153 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
SMNDC1-204ENST00000471297 A0A087WYN8 130 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 LCE6AA0A183 80 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 EPM2AB3EWF7 344 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 SPRR1AP35321 89 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 ETDBQ3ZM63 59 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 TEN1Q86WV5 123 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 KRTAP7-1Q8IUC3 87 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 MTURNQ8N3F0 131 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 DPH3Q96FX2 82 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 ORMDL1Q9P0S3 153 aa3.84□□□□□ -1.79
SMNDC1-204ENST00000471297 DNHD1Q96M86 4753 aa3.84□□□□□ -1.8
SMNDC1-204ENST00000471297 ETDCA0A1B0GVM5 59 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 RPL37AP8A6NKH3 93 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 J3QR89 54 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 TMEM256-PLSCR3K7ERE1 68 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 OCIAD2Q56VL3 154 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 PPDPFLQ8WWR9 84 aa3.83□□□□□ -1.8
SMNDC1-204ENST00000471297 KRTAP29-1A8MX34 341 aaPredicted RBP3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 K7ERU9 68 aa3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 LINC00336Q6ZUF6 198 aa3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 DHRS4-AS1Q9P1J3 65 aa3.82□□□□□ -1.8
SMNDC1-204ENST00000471297 UBE2BP63146 152 aa3.81□□□□□ -1.8
SMNDC1-204ENST00000471297 Q6ZRX8 168 aa3.81□□□□□ -1.8
SMNDC1-204ENST00000471297 PHF5AQ7RTV0 110 aaKnown RBP3.81□□□□□ -1.8
SMNDC1-204ENST00000471297 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
SMNDC1-204ENST00000471297 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-204ENST00000471297 PRKDCP78527 4128 aaKnown RBP3.79□□□□□ -1.8
SMNDC1-204ENST00000471297 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
SMNDC1-204ENST00000471297 H0Y9J4 135 aa3.79□□□□□ -1.8
SMNDC1-204ENST00000471297 PANO1I0J062 215 aa3.79□□□□□ -1.8
SMNDC1-204ENST00000471297 Q6ZQY7 126 aa3.79□□□□□ -1.8
SMNDC1-204ENST00000471297 CSMD3Q7Z407 3707 aa3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 FUSP35637 526 aaKnown RBP eCLIP3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 DNAH7Q8WXX0 4024 aa3.78□□□□□ -1.8
SMNDC1-204ENST00000471297 BCE1O60756 84 aa3.77□□□□□ -1.81
SMNDC1-204ENST00000471297 UBE2AP49459 152 aa3.77□□□□□ -1.81
SMNDC1-204ENST00000471297 Q9BRP9 147 aa3.77□□□□□ -1.81
SMNDC1-204ENST00000471297 ACYP1P07311 99 aa3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 Q6ZSA8 131 aa3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
SMNDC1-204ENST00000471297 TENM2Q9NT68 2774 aa3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms